RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 JPH4Q96JJ6 628 aa29.49■■■□□ 2.31
DDR1-277ENST00000515219 PRG4Q92954 1404 aaPredicted RBP29.45■■■□□ 2.31
DDR1-277ENST00000515219 KIAA0586Q9BVV6 1533 aa29.45■■■□□ 2.3
DDR1-277ENST00000515219 RAPGEF2Q9Y4G8 1499 aa29.39■■■□□ 2.3
DDR1-277ENST00000515219 IQGAP2Q13576 1575 aa29.28■■■□□ 2.28
DDR1-277ENST00000515219 TRHP20396 242 aaPredicted RBP29.26■■■□□ 2.27
DDR1-277ENST00000515219 PRXQ9BXM0 1461 aa29.2■■■□□ 2.26
DDR1-277ENST00000515219 CARMIL2Q6F5E8 1435 aa29.17■■■□□ 2.26
DDR1-277ENST00000515219 CTTNBP2Q8WZ74 1663 aa29.16■■■□□ 2.26
DDR1-277ENST00000515219 CSRNP3Q8WYN3 585 aa29.16■■■□□ 2.26
DDR1-277ENST00000515219 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
DDR1-277ENST00000515219 EEA1Q15075 1411 aa29.14■■■□□ 2.26
DDR1-277ENST00000515219 TTBK1Q5TCY1 1321 aaPredicted RBP29.09■■■□□ 2.25
DDR1-277ENST00000515219 UGGT2Q9NYU1 1516 aa29.09■■■□□ 2.25
DDR1-277ENST00000515219 FAM9AQ8IZU1 332 aaPredicted RBP29.08■■■□□ 2.25
DDR1-277ENST00000515219 PTPRGP23470 1445 aa29.08■■■□□ 2.25
DDR1-277ENST00000515219 TNIKQ9UKE5 1360 aa29.07■■■□□ 2.24
DDR1-277ENST00000515219 DISP1Q96F81 1524 aa29.06■■■□□ 2.24
DDR1-277ENST00000515219 ADCY10Q96PN6 1610 aa29.04■■■□□ 2.24
DDR1-277ENST00000515219 NPM1P06748 294 aaKnown RBP eCLIP29.02■■■□□ 2.24
DDR1-277ENST00000515219 KIAA0556O60303 1618 aa29■■■□□ 2.23
DDR1-277ENST00000515219 GOLGA3Q08378 1498 aa28.92■■■□□ 2.22
DDR1-277ENST00000515219 MAPKBP1O60336 1514 aa28.88■■■□□ 2.21
DDR1-277ENST00000515219 KIF21BO75037 1637 aa28.87■■■□□ 2.21
DDR1-277ENST00000515219 UACAQ9BZF9 1416 aa28.86■■■□□ 2.21
DDR1-277ENST00000515219 KIF13AQ9H1H9 1805 aa28.85■■■□□ 2.21
DDR1-277ENST00000515219 UHRF1BP1LA0JNW5 1464 aa28.84■■■□□ 2.21
DDR1-277ENST00000515219 ABCC2Q92887 1545 aa28.83■■■□□ 2.21
DDR1-277ENST00000515219 P3H3Q8IVL6 736 aa28.77■■■□□ 2.2
DDR1-277ENST00000515219 ABCC10Q5T3U5 1492 aa28.77■■■□□ 2.2
DDR1-277ENST00000515219 FAM69CQ0P6D2 419 aa28.75■■■□□ 2.19
DDR1-277ENST00000515219 EHMT2Q96KQ7 1210 aa28.75■■■□□ 2.19
DDR1-277ENST00000515219 RANGAP1P46060 587 aaPredicted RBP28.74■■■□□ 2.19
DDR1-277ENST00000515219 DIP2BQ9P265 1576 aa28.74■■■□□ 2.19
DDR1-277ENST00000515219 PLB1Q6P1J6 1458 aa28.73■■■□□ 2.19
DDR1-277ENST00000515219 SAMD9Q5K651 1589 aa28.73■■■□□ 2.19
DDR1-277ENST00000515219 KDM5BQ9UGL1 1544 aa28.7■■■□□ 2.19
DDR1-277ENST00000515219 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
DDR1-277ENST00000515219 ABCA8O94911 1581 aa28.68■■■□□ 2.18
DDR1-277ENST00000515219 UBTFP17480 764 aaKnown RBP28.68■■■□□ 2.18
DDR1-277ENST00000515219 ASXL2Q76L83 1435 aa28.68■■■□□ 2.18
DDR1-277ENST00000515219 TSPOAP1O95153 1857 aa28.59■■■□□ 2.17
DDR1-277ENST00000515219 FHOD3Q2V2M9 1422 aa28.57■■■□□ 2.16
DDR1-277ENST00000515219 EFCAB5A4FU69 1503 aa28.57■■■□□ 2.16
DDR1-277ENST00000515219 RAPGEF6Q8TEU7 1601 aa28.53■■■□□ 2.16
DDR1-277ENST00000515219 GLI2P10070 1586 aa28.52■■■□□ 2.16
DDR1-277ENST00000515219 ARID3CA6NKF2 412 aa28.51■■■□□ 2.15
DDR1-277ENST00000515219 EPRSP07814 1512 aaKnown RBP28.51■■■□□ 2.15
DDR1-277ENST00000515219 WDR7Q9Y4E6 1490 aa28.5■■■□□ 2.15
DDR1-277ENST00000515219 ATP10BO94823 1461 aa28.45■■■□□ 2.14
DDR1-277ENST00000515219 MAP3K4Q9Y6R4 1608 aa28.41■■■□□ 2.14
DDR1-277ENST00000515219 KCNH8Q96L42 1107 aa28.41■■■□□ 2.14
DDR1-277ENST00000515219 PPRC1Q5VV67 1664 aaKnown RBP28.39■■■□□ 2.14
DDR1-277ENST00000515219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.39■■■□□ 2.14
DDR1-277ENST00000515219 HNRNPUL2Q1KMD3 747 aaKnown RBP28.39■■■□□ 2.14
DDR1-277ENST00000515219 NUP153P49790 1475 aaKnown RBP28.39■■■□□ 2.13
DDR1-277ENST00000515219 ARHGAP35Q9NRY4 1499 aa28.39■■■□□ 2.13
DDR1-277ENST00000515219 KDM6BO15054 1643 aa28.36■■■□□ 2.13
DDR1-277ENST00000515219 FMN1Q68DA7 1419 aa28.31■■■□□ 2.12
DDR1-277ENST00000515219 CFAP43Q8NDM7 1665 aa28.31■■■□□ 2.12
DDR1-277ENST00000515219 TEX14Q8IWB6 1497 aa28.29■■■□□ 2.12
DDR1-277ENST00000515219 CD109Q6YHK3 1445 aa28.27■■■□□ 2.12
DDR1-277ENST00000515219 ATP1B4Q9UN42 357 aaPredicted RBP28.25■■■□□ 2.11
DDR1-277ENST00000515219 HECW1Q76N89 1606 aa28.21■■■□□ 2.11
DDR1-277ENST00000515219 PLEKHD1A6NEE1 506 aa28.21■■■□□ 2.11
DDR1-277ENST00000515219 MAGI3Q5TCQ9 1506 aa28.2■■■□□ 2.1
DDR1-277ENST00000515219 CDK13Q14004 1512 aaKnown RBP28.19■■■□□ 2.1
DDR1-277ENST00000515219 ABCA9Q8IUA7 1624 aa28.19■■■□□ 2.1
DDR1-277ENST00000515219 CLIP1P30622 1438 aa28.17■■■□□ 2.1
DDR1-277ENST00000515219 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
DDR1-277ENST00000515219 LRRIQ1Q96JM4 1722 aa28.08■■■□□ 2.09
DDR1-277ENST00000515219 PCF11O94913 1555 aaKnown RBP28.07■■■□□ 2.08
DDR1-277ENST00000515219 CASKIN1Q8WXD9 1431 aa28.05■■■□□ 2.08
DDR1-277ENST00000515219 CDK11AQ9UQ88 783 aaPredicted RBP28.05■■■□□ 2.08
DDR1-277ENST00000515219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.086e-7■■■■□ 21.9
DDR1-277ENST00000515219 TTC37Q6PGP7 1564 aa27.99■■■□□ 2.07
DDR1-277ENST00000515219 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
DDR1-277ENST00000515219 CEP162Q5TB80 1403 aa27.99■■■□□ 2.07
DDR1-277ENST00000515219 CCDC18Q5T9S5 1454 aa27.98■■■□□ 2.07
DDR1-277ENST00000515219 FYCO1Q9BQS8 1478 aa27.98■■■□□ 2.07
DDR1-277ENST00000515219 NEO1Q92859 1461 aa27.97■■■□□ 2.07
DDR1-277ENST00000515219 PHLDB1Q86UU1 1377 aa27.97■■■□□ 2.07
DDR1-277ENST00000515219 ARAP3Q8WWN8 1544 aa27.97■■■□□ 2.07
DDR1-277ENST00000515219 TROQ12816 1431 aaPredicted RBP27.94■■■□□ 2.06
DDR1-277ENST00000515219 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
DDR1-277ENST00000515219 KIF14Q15058 1648 aa27.92■■■□□ 2.06
DDR1-277ENST00000515219 CFAP74Q9C0B2 1584 aa27.9■■■□□ 2.06
DDR1-277ENST00000515219 FANCAO15360 1455 aa27.89■■■□□ 2.06
DDR1-277ENST00000515219 MYO5CQ9NQX4 1742 aa27.87■■■□□ 2.05
DDR1-277ENST00000515219 PLCH2O75038 1416 aa27.85■■■□□ 2.05
DDR1-277ENST00000515219 AKNAQ7Z591 1439 aa27.85■■■□□ 2.05
DDR1-277ENST00000515219 RAPGEF3O95398 923 aa27.84■■■□□ 2.05
DDR1-277ENST00000515219 FRMPD1Q5SYB0 1578 aa27.78■■■□□ 2.04
DDR1-277ENST00000515219 DENND4BO75064 1496 aaPredicted RBP27.78■■■□□ 2.04
DDR1-277ENST00000515219 KDM4FA0A1W2PPD8 638 aa27.78■■■□□ 2.04
DDR1-277ENST00000515219 RICTORQ6R327 1708 aa27.76■■■□□ 2.03
DDR1-277ENST00000515219 EFCAB2Q5VUJ9 269 aa27.76■■■□□ 2.03
DDR1-277ENST00000515219 ARHGAP5Q13017 1502 aa27.75■■■□□ 2.03
DDR1-277ENST00000515219 ADGRL1O94910 1474 aa27.74■■■□□ 2.03
DDR1-277ENST00000515219 CDC42BPBQ9Y5S2 1711 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms