RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
PHF3-211ENST00000514822 GSE1Q14687 1217 aa13.73□□□□□ -0.21
PHF3-211ENST00000514822 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
PHF3-211ENST00000514822 CLCN6P51797 869 aa13.7□□□□□ -0.22
PHF3-211ENST00000514822 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
PHF3-211ENST00000514822 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
PHF3-211ENST00000514822 GABBR2O75899 941 aa13.65□□□□□ -0.22
PHF3-211ENST00000514822 KIF12Q96FN5 646 aa13.6□□□□□ -0.23
PHF3-211ENST00000514822 PYGBP11216 843 aa13.58□□□□□ -0.24
PHF3-211ENST00000514822 MAP3K13O43283 966 aa13.56□□□□□ -0.24
PHF3-211ENST00000514822 GALR2O43603 387 aaPredicted RBP13.55□□□□□ -0.24
PHF3-211ENST00000514822 TRIM41Q8WV44 630 aa13.55□□□□□ -0.24
PHF3-211ENST00000514822 SGIP1Q9BQI5 828 aa13.55□□□□□ -0.24
PHF3-211ENST00000514822 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
PHF3-211ENST00000514822 CHRM1P11229 460 aaPredicted RBP13.53□□□□□ -0.24
PHF3-211ENST00000514822 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
PHF3-211ENST00000514822 IFNL1Q8IU54 200 aa13.45□□□□□ -0.26
PHF3-211ENST00000514822 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
PHF3-211ENST00000514822 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
PHF3-211ENST00000514822 ECM2O94769 699 aaPredicted RBP13.43□□□□□ -0.26
PHF3-211ENST00000514822 PKD2Q13563 968 aa13.43□□□□□ -0.26
PHF3-211ENST00000514822 PCDHB8Q9UN66 801 aa13.4□□□□□ -0.26
PHF3-211ENST00000514822 TIE1P35590 1138 aa13.37□□□□□ -0.27
PHF3-211ENST00000514822 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
PHF3-211ENST00000514822 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
PHF3-211ENST00000514822 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
PHF3-211ENST00000514822 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
PHF3-211ENST00000514822 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
PHF3-211ENST00000514822 ASTLQ6HA08 431 aaPredicted RBP13.31□□□□□ -0.28
PHF3-211ENST00000514822 RNF25Q96BH1 459 aaPredicted RBP13.31□□□□□ -0.28
PHF3-211ENST00000514822 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
PHF3-211ENST00000514822 PDAP1Q13442 181 aaKnown RBP13.29□□□□□ -0.28
PHF3-211ENST00000514822 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
PHF3-211ENST00000514822 TMEM106CQ9BVX2 250 aa13.28□□□□□ -0.28
PHF3-211ENST00000514822 PSEN1P49768 467 aa13.27□□□□□ -0.29
PHF3-211ENST00000514822 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
PHF3-211ENST00000514822 RGL2O15211 777 aa13.26□□□□□ -0.29
PHF3-211ENST00000514822 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
PHF3-211ENST00000514822 VGFO15240 615 aaPredicted RBP13.25□□□□□ -0.29
PHF3-211ENST00000514822 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
PHF3-211ENST00000514822 RTN4Q9NQC3 1192 aaKnown RBP13.21□□□□□ -0.29
PHF3-211ENST00000514822 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
PHF3-211ENST00000514822 SLC39A7Q92504 469 aa13.18□□□□□ -0.3
PHF3-211ENST00000514822 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
PHF3-211ENST00000514822 ZFP91Q96JP5 570 aaPredicted RBP13.17□□□□□ -0.3
PHF3-211ENST00000514822 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
PHF3-211ENST00000514822 C7P10643 843 aa13.14□□□□□ -0.31
PHF3-211ENST00000514822 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
PHF3-211ENST00000514822 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
PHF3-211ENST00000514822 IER5LQ5T953 404 aa13.11□□□□□ -0.31
PHF3-211ENST00000514822 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
PHF3-211ENST00000514822 STK25O00506 426 aa13.09□□□□□ -0.31
PHF3-211ENST00000514822 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
PHF3-211ENST00000514822 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
PHF3-211ENST00000514822 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
PHF3-211ENST00000514822 SEC24BO95487 1268 aa13.05□□□□□ -0.32
PHF3-211ENST00000514822 CHGAP10645 457 aaKnown RBP13.01□□□□□ -0.33
PHF3-211ENST00000514822 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
PHF3-211ENST00000514822 EFCAB3Q8N7B9 438 aa13.01□□□□□ -0.33
PHF3-211ENST00000514822 PLCG2P16885 1265 aa13□□□□□ -0.33
PHF3-211ENST00000514822 HS6ST3Q8IZP7 471 aa13□□□□□ -0.33
PHF3-211ENST00000514822 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
PHF3-211ENST00000514822 OCEL1Q9H607 264 aa12.98□□□□□ -0.33
PHF3-211ENST00000514822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.335e-17■■■□□ 18.9
PHF3-211ENST00000514822 COLQQ9Y215 455 aaPredicted RBP12.98□□□□□ -0.33
PHF3-211ENST00000514822 SOX12O15370 315 aa12.97□□□□□ -0.33
PHF3-211ENST00000514822 LHX8Q68G74 356 aa12.95□□□□□ -0.34
PHF3-211ENST00000514822 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
PHF3-211ENST00000514822 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
PHF3-211ENST00000514822 PDCD7Q8N8D1 485 aaKnown RBP12.91□□□□□ -0.34
PHF3-211ENST00000514822 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
PHF3-211ENST00000514822 NLRP6P59044 892 aa12.88□□□□□ -0.35
PHF3-211ENST00000514822 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
PHF3-211ENST00000514822 MFRPQ9BY79 579 aa12.86□□□□□ -0.35
PHF3-211ENST00000514822 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
PHF3-211ENST00000514822 MAMSTRQ6ZN01 415 aa12.82□□□□□ -0.36
PHF3-211ENST00000514822 FBXO22Q8NEZ5 403 aa12.82□□□□□ -0.36
PHF3-211ENST00000514822 DPY19L2Q6NUT2 758 aa12.81□□□□□ -0.36
PHF3-211ENST00000514822 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
PHF3-211ENST00000514822 G3V3G9 751 aa12.8□□□□□ -0.36
PHF3-211ENST00000514822 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
PHF3-211ENST00000514822 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
PHF3-211ENST00000514822 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
PHF3-211ENST00000514822 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
PHF3-211ENST00000514822 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
PHF3-211ENST00000514822 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
PHF3-211ENST00000514822 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
PHF3-211ENST00000514822 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
PHF3-211ENST00000514822 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.71□□□□□ -0.37
PHF3-211ENST00000514822 TMEM121BQ9BXQ6 578 aaPredicted RBP12.69□□□□□ -0.38
PHF3-211ENST00000514822 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
PHF3-211ENST00000514822 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
PHF3-211ENST00000514822 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
PHF3-211ENST00000514822 PPP1R37O75864 691 aa12.65□□□□□ -0.38
PHF3-211ENST00000514822 SLAIN1Q8ND83 568 aa12.63□□□□□ -0.39
PHF3-211ENST00000514822 SPRYD3Q8NCJ5 442 aa12.59□□□□□ -0.39
PHF3-211ENST00000514822 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
PHF3-211ENST00000514822 CFAP44Q96MT7 982 aa12.54□□□□□ -0.4
PHF3-211ENST00000514822 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
PHF3-211ENST00000514822 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms