RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 SOGA1O94964 1423 aa17.2■□□□□ 0.34
SH3D19-209ENST00000514013 KCNA4P22459 653 aa17.14■□□□□ 0.33
SH3D19-209ENST00000514013 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
SH3D19-209ENST00000514013 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
SH3D19-209ENST00000514013 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
SH3D19-209ENST00000514013 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
SH3D19-209ENST00000514013 POTEHQ6S545 545 aa17.12■□□□□ 0.33
SH3D19-209ENST00000514013 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
SH3D19-209ENST00000514013 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
SH3D19-209ENST00000514013 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
SH3D19-209ENST00000514013 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
SH3D19-209ENST00000514013 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
SH3D19-209ENST00000514013 CUX1P39880 1505 aa17.06■□□□□ 0.32
SH3D19-209ENST00000514013 ERCC6L2Q5T890 1561 aa17.04■□□□□ 0.32
SH3D19-209ENST00000514013 APLP2Q06481 763 aa16.98■□□□□ 0.31
SH3D19-209ENST00000514013 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
SH3D19-209ENST00000514013 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
SH3D19-209ENST00000514013 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
SH3D19-209ENST00000514013 ABCB7O75027 752 aa16.9■□□□□ 0.3
SH3D19-209ENST00000514013 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
SH3D19-209ENST00000514013 CEP170Q5SW79 1584 aa16.89■□□□□ 0.3
SH3D19-209ENST00000514013 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
SH3D19-209ENST00000514013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
SH3D19-209ENST00000514013 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
SH3D19-209ENST00000514013 NUP160Q12769 1436 aa16.87■□□□□ 0.29
SH3D19-209ENST00000514013 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
SH3D19-209ENST00000514013 KIF13AQ9H1H9 1805 aa16.82■□□□□ 0.28
SH3D19-209ENST00000514013 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
SH3D19-209ENST00000514013 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.28
SH3D19-209ENST00000514013 KDM4FA0A1W2PPD8 638 aa16.74■□□□□ 0.27
SH3D19-209ENST00000514013 FHAD1B1AJZ9 1412 aa16.73■□□□□ 0.27
SH3D19-209ENST00000514013 PRG4Q92954 1404 aaPredicted RBP16.73■□□□□ 0.27
SH3D19-209ENST00000514013 ABCC10Q5T3U5 1492 aa16.72■□□□□ 0.27
SH3D19-209ENST00000514013 FAM69CQ0P6D2 419 aa16.71■□□□□ 0.27
SH3D19-209ENST00000514013 ILDR1Q86SU0 546 aaPredicted RBP16.71■□□□□ 0.27
SH3D19-209ENST00000514013 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
SH3D19-209ENST00000514013 JPH4Q96JJ6 628 aa16.66■□□□□ 0.26
SH3D19-209ENST00000514013 DIP2BQ9P265 1576 aa16.66■□□□□ 0.26
SH3D19-209ENST00000514013 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
SH3D19-209ENST00000514013 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
SH3D19-209ENST00000514013 ADCY10Q96PN6 1610 aa16.61■□□□□ 0.25
SH3D19-209ENST00000514013 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
SH3D19-209ENST00000514013 KDM6BO15054 1643 aa16.6■□□□□ 0.25
SH3D19-209ENST00000514013 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
SH3D19-209ENST00000514013 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
SH3D19-209ENST00000514013 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
SH3D19-209ENST00000514013 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
SH3D19-209ENST00000514013 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
SH3D19-209ENST00000514013 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
SH3D19-209ENST00000514013 ADGRL1O94910 1474 aa16.46■□□□□ 0.23
SH3D19-209ENST00000514013 KIAA0586Q9BVV6 1533 aa16.45■□□□□ 0.22
SH3D19-209ENST00000514013 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
SH3D19-209ENST00000514013 POLA2Q14181 598 aa16.43■□□□□ 0.22
SH3D19-209ENST00000514013 COL17A1Q9UMD9 1497 aaPredicted RBP16.42■□□□□ 0.22
SH3D19-209ENST00000514013 PPRC1Q5VV67 1664 aaKnown RBP16.41■□□□□ 0.22
SH3D19-209ENST00000514013 HECW2Q9P2P5 1572 aa16.38■□□□□ 0.21
SH3D19-209ENST00000514013 PTPRGP23470 1445 aa16.38■□□□□ 0.21
SH3D19-209ENST00000514013 ASXL2Q76L83 1435 aa16.38■□□□□ 0.21
SH3D19-209ENST00000514013 TTBK1Q5TCY1 1321 aaPredicted RBP16.38■□□□□ 0.21
SH3D19-209ENST00000514013 IGF1RP08069 1367 aa16.38■□□□□ 0.21
SH3D19-209ENST00000514013 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
SH3D19-209ENST00000514013 GLI2P10070 1586 aa16.34■□□□□ 0.21
SH3D19-209ENST00000514013 PLB1Q6P1J6 1458 aa16.32■□□□□ 0.2
SH3D19-209ENST00000514013 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
SH3D19-209ENST00000514013 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
SH3D19-209ENST00000514013 EPRSP07814 1512 aaKnown RBP16.28■□□□□ 0.2
SH3D19-209ENST00000514013 UHRF1BP1LA0JNW5 1464 aa16.28■□□□□ 0.2
SH3D19-209ENST00000514013 CUL7Q14999 1698 aa16.26■□□□□ 0.19
SH3D19-209ENST00000514013 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
SH3D19-209ENST00000514013 MAP3K4Q9Y6R4 1608 aa16.25■□□□□ 0.19
SH3D19-209ENST00000514013 UACAQ9BZF9 1416 aa16.25■□□□□ 0.19
SH3D19-209ENST00000514013 CARMIL2Q6F5E8 1435 aa16.24■□□□□ 0.19
SH3D19-209ENST00000514013 DISP1Q96F81 1524 aa16.23■□□□□ 0.19
SH3D19-209ENST00000514013 KDM5BQ9UGL1 1544 aa16.22■□□□□ 0.19
SH3D19-209ENST00000514013 CARMIL1Q5VZK9 1371 aa16.22■□□□□ 0.19
SH3D19-209ENST00000514013 IQGAP2Q13576 1575 aa16.19■□□□□ 0.18
SH3D19-209ENST00000514013 TEX14Q8IWB6 1497 aa16.19■□□□□ 0.18
SH3D19-209ENST00000514013 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
SH3D19-209ENST00000514013 FBXO41Q8TF61 875 aa16.14■□□□□ 0.17
SH3D19-209ENST00000514013 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
SH3D19-209ENST00000514013 WDR7Q9Y4E6 1490 aa16.12■□□□□ 0.17
SH3D19-209ENST00000514013 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
SH3D19-209ENST00000514013 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
SH3D19-209ENST00000514013 UGGT2Q9NYU1 1516 aa16.1■□□□□ 0.17
SH3D19-209ENST00000514013 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
SH3D19-209ENST00000514013 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
SH3D19-209ENST00000514013 MAGI3Q5TCQ9 1506 aa16.08■□□□□ 0.16
SH3D19-209ENST00000514013 KIAA0556O60303 1618 aa16.08■□□□□ 0.16
SH3D19-209ENST00000514013 KIF21BO75037 1637 aa16.07■□□□□ 0.16
SH3D19-209ENST00000514013 CD109Q6YHK3 1445 aa16.06■□□□□ 0.16
SH3D19-209ENST00000514013 KCNH8Q96L42 1107 aa16.02■□□□□ 0.16
SH3D19-209ENST00000514013 PTPRMP28827 1452 aa16■□□□□ 0.15
SH3D19-209ENST00000514013 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
SH3D19-209ENST00000514013 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
SH3D19-209ENST00000514013 ABCA8O94911 1581 aa15.99■□□□□ 0.15
SH3D19-209ENST00000514013 ADAMTSL3P82987 1691 aa15.96■□□□□ 0.15
SH3D19-209ENST00000514013 ARAP3Q8WWN8 1544 aa15.96■□□□□ 0.15
SH3D19-209ENST00000514013 LMTK3Q96Q04 1460 aa15.93■□□□□ 0.14
SH3D19-209ENST00000514013 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
SH3D19-209ENST00000514013 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms