RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 NBR1Q14596 966 aa10.63□□□□□ -0.71
CALCOCO2-222ENST00000514006 RNF25Q96BH1 459 aaPredicted RBP10.62□□□□□ -0.71
CALCOCO2-222ENST00000514006 NUBP1P53384 320 aa10.59□□□□□ -0.71
CALCOCO2-222ENST00000514006 DCAF8Q5TAQ9 597 aa10.59□□□□□ -0.71
CALCOCO2-222ENST00000514006 RIOK3O14730 519 aaKnown RBP10.58□□□□□ -0.72
CALCOCO2-222ENST00000514006 SPDYE1Q8NFV5 336 aaPredicted RBP10.54□□□□□ -0.72
CALCOCO2-222ENST00000514006 NKX1-1Q15270 411 aaPredicted RBP10.53□□□□□ -0.72
CALCOCO2-222ENST00000514006 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
CALCOCO2-222ENST00000514006 STK25O00506 426 aa10.51□□□□□ -0.73
CALCOCO2-222ENST00000514006 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
CALCOCO2-222ENST00000514006 GTPBP6O43824 516 aaPredicted RBP10.5□□□□□ -0.73
CALCOCO2-222ENST00000514006 CLEC11AQ9Y240 323 aa10.47□□□□□ -0.73
CALCOCO2-222ENST00000514006 PRR29P0C7W0 189 aa10.46□□□□□ -0.73
CALCOCO2-222ENST00000514006 CREBZFQ9NS37 354 aa10.46□□□□□ -0.73
CALCOCO2-222ENST00000514006 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
CALCOCO2-222ENST00000514006 RBM42Q9BTD8 480 aaKnown RBP10.45□□□□□ -0.74
CALCOCO2-222ENST00000514006 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-222ENST00000514006 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
CALCOCO2-222ENST00000514006 SGIP1Q9BQI5 828 aa10.42□□□□□ -0.74
CALCOCO2-222ENST00000514006 RYDENQ9NUL5 291 aaKnown RBP10.42□□□□□ -0.74
CALCOCO2-222ENST00000514006 STK24Q9Y6E0 443 aa10.41□□□□□ -0.74
CALCOCO2-222ENST00000514006 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
CALCOCO2-222ENST00000514006 BCL11BQ9C0K0 894 aaPredicted RBP10.4□□□□□ -0.74
CALCOCO2-222ENST00000514006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.39□□□□□ -0.75
CALCOCO2-222ENST00000514006 ZFP91Q96JP5 570 aaPredicted RBP10.39□□□□□ -0.75
CALCOCO2-222ENST00000514006 PYGBP11216 843 aa10.35□□□□□ -0.75
CALCOCO2-222ENST00000514006 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
CALCOCO2-222ENST00000514006 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
CALCOCO2-222ENST00000514006 ZNF467Q7Z7K2 595 aaPredicted RBP10.23□□□□□ -0.77
CALCOCO2-222ENST00000514006 WDR70Q9NW82 654 aa10.23□□□□□ -0.77
CALCOCO2-222ENST00000514006 PITPNM1O00562 1244 aa10.22□□□□□ -0.77
CALCOCO2-222ENST00000514006 TSPYL2Q9H2G4 693 aaPredicted RBP10.19□□□□□ -0.78
CALCOCO2-222ENST00000514006 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
CALCOCO2-222ENST00000514006 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
CALCOCO2-222ENST00000514006 KCNV2Q8TDN2 545 aa10.17□□□□□ -0.78
CALCOCO2-222ENST00000514006 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO2-222ENST00000514006 CADPS2Q86UW7 1296 aa10.16□□□□□ -0.78
CALCOCO2-222ENST00000514006 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
CALCOCO2-222ENST00000514006 TMEM132AQ24JP5 1023 aa10.13□□□□□ -0.79
CALCOCO2-222ENST00000514006 CHRDL2Q6WN34 429 aa10.13□□□□□ -0.79
CALCOCO2-222ENST00000514006 CHADLQ6NUI6 762 aa10.12□□□□□ -0.79
CALCOCO2-222ENST00000514006 LMOD2Q6P5Q4 547 aa10.12□□□□□ -0.79
CALCOCO2-222ENST00000514006 PCDHB8Q9UN66 801 aa10.12□□□□□ -0.79
CALCOCO2-222ENST00000514006 PCDHB13Q9Y5F0 798 aa10.12□□□□□ -0.79
CALCOCO2-222ENST00000514006 PSEN1P49768 467 aa10.1□□□□□ -0.79
CALCOCO2-222ENST00000514006 ERICH6Q7L0X2 663 aa10.1□□□□□ -0.79
CALCOCO2-222ENST00000514006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.1□□□□□ -0.79
CALCOCO2-222ENST00000514006 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
CALCOCO2-222ENST00000514006 MFRPQ9BY79 579 aa10.09□□□□□ -0.79
CALCOCO2-222ENST00000514006 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
CALCOCO2-222ENST00000514006 SP7Q8TDD2 431 aaPredicted RBP10.08□□□□□ -0.8
CALCOCO2-222ENST00000514006 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
CALCOCO2-222ENST00000514006 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
CALCOCO2-222ENST00000514006 NLRP6P59044 892 aa10.01□□□□□ -0.81
CALCOCO2-222ENST00000514006 PAK3O75914 559 aaPredicted RBP10□□□□□ -0.81
CALCOCO2-222ENST00000514006 E2F4Q16254 413 aa10□□□□□ -0.81
CALCOCO2-222ENST00000514006 PPP1R37O75864 691 aa9.99□□□□□ -0.81
CALCOCO2-222ENST00000514006 EFCAB3Q8N7B9 438 aa9.99□□□□□ -0.81
CALCOCO2-222ENST00000514006 SOX12O15370 315 aa9.98□□□□□ -0.81
CALCOCO2-222ENST00000514006 PRKAR2AP13861 404 aaKnown RBP9.98□□□□□ -0.81
CALCOCO2-222ENST00000514006 IFNL1Q8IU54 200 aa9.98□□□□□ -0.81
CALCOCO2-222ENST00000514006 FBXO22Q8NEZ5 403 aa9.97□□□□□ -0.81
CALCOCO2-222ENST00000514006 CABP2Q9NPB3 220 aa9.97□□□□□ -0.81
CALCOCO2-222ENST00000514006 ZC3H15Q8WU90 426 aaKnown RBP9.95□□□□□ -0.82
CALCOCO2-222ENST00000514006 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
CALCOCO2-222ENST00000514006 SEMA3EO15041 775 aa9.93□□□□□ -0.82
CALCOCO2-222ENST00000514006 MAP3K13O43283 966 aa9.93□□□□□ -0.82
CALCOCO2-222ENST00000514006 BRPF1P55201 1214 aaPredicted RBP9.93□□□□□ -0.82
CALCOCO2-222ENST00000514006 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
CALCOCO2-222ENST00000514006 C14orf37Q86TY3 774 aa9.91□□□□□ -0.82
CALCOCO2-222ENST00000514006 KIF12Q96FN5 646 aa9.91□□□□□ -0.82
CALCOCO2-222ENST00000514006 PDE4AP27815 886 aa9.88□□□□□ -0.83
CALCOCO2-222ENST00000514006 FXR2P51116 673 aaKnown RBP eCLIP9.88□□□□□ -0.83
CALCOCO2-222ENST00000514006 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
CALCOCO2-222ENST00000514006 SMYD5Q6GMV2 418 aa9.88□□□□□ -0.83
CALCOCO2-222ENST00000514006 LARP6Q9BRS8 491 aaKnown RBP9.88□□□□□ -0.83
CALCOCO2-222ENST00000514006 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
CALCOCO2-222ENST00000514006 SLC24A3Q9HC58 644 aa9.87□□□□□ -0.83
CALCOCO2-222ENST00000514006 ARXQ96QS3 562 aa9.86□□□□□ -0.83
CALCOCO2-222ENST00000514006 MFSD10Q14728 455 aa9.84□□□□□ -0.83
CALCOCO2-222ENST00000514006 GOLGA2Q08379 1002 aa9.83□□□□□ -0.84
CALCOCO2-222ENST00000514006 DDX27Q96GQ7 796 aaKnown RBP9.83□□□□□ -0.84
CALCOCO2-222ENST00000514006 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
CALCOCO2-222ENST00000514006 CRISPLD2Q9H0B8 497 aa9.82□□□□□ -0.84
CALCOCO2-222ENST00000514006 ZMYND10O75800 440 aa9.81□□□□□ -0.84
CALCOCO2-222ENST00000514006 ARIH1Q9Y4X5 557 aaPredicted RBP9.81□□□□□ -0.84
CALCOCO2-222ENST00000514006 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
CALCOCO2-222ENST00000514006 CAMK2BQ13554 666 aa9.77□□□□□ -0.85
CALCOCO2-222ENST00000514006 BARGINQ6ZT62 677 aa9.75□□□□□ -0.85
CALCOCO2-222ENST00000514006 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
CALCOCO2-222ENST00000514006 PHF12Q96QT6 1004 aa9.75□□□□□ -0.85
CALCOCO2-222ENST00000514006 TMEM106CQ9BVX2 250 aa9.75□□□□□ -0.85
CALCOCO2-222ENST00000514006 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
CALCOCO2-222ENST00000514006 MKRN3Q13064 507 aaKnown RBP9.74□□□□□ -0.85
CALCOCO2-222ENST00000514006 HAX1O00165 279 aa9.73□□□□□ -0.85
CALCOCO2-222ENST00000514006 GPIHBP1Q8IV16 184 aa9.71□□□□□ -0.86
CALCOCO2-222ENST00000514006 AK7Q96M32 723 aa9.7□□□□□ -0.86
CALCOCO2-222ENST00000514006 PPP1R15BQ5SWA1 713 aa9.69□□□□□ -0.86
CALCOCO2-222ENST00000514006 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
CALCOCO2-222ENST00000514006 HOMEZQ8IX15 550 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms