RNA–Protein interactions for RNA: ENST00000513801.5

ATP2C1-221, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-221ENST00000513801 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
ATP2C1-221ENST00000513801 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
ATP2C1-221ENST00000513801 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
ATP2C1-221ENST00000513801 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
ATP2C1-221ENST00000513801 BRPF3Q9ULD4 1205 aa17.21■□□□□ 0.35
ATP2C1-221ENST00000513801 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
ATP2C1-221ENST00000513801 ZBTB47Q9UFB7 747 aaPredicted RBP17.19■□□□□ 0.34
ATP2C1-221ENST00000513801 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
ATP2C1-221ENST00000513801 TIMELESSQ9UNS1 1208 aa17.17■□□□□ 0.34
ATP2C1-221ENST00000513801 IPO9Q96P70 1041 aaKnown RBP17.17■□□□□ 0.34
ATP2C1-221ENST00000513801 RAB3GAP2Q9H2M9 1393 aa17.15■□□□□ 0.34
ATP2C1-221ENST00000513801 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
ATP2C1-221ENST00000513801 NEFMP07197 916 aa17.12■□□□□ 0.33
ATP2C1-221ENST00000513801 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
ATP2C1-221ENST00000513801 EEA1Q15075 1411 aa17.11■□□□□ 0.33
ATP2C1-221ENST00000513801 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
ATP2C1-221ENST00000513801 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
ATP2C1-221ENST00000513801 KIF21BO75037 1637 aa17.09■□□□□ 0.33
ATP2C1-221ENST00000513801 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.32
ATP2C1-221ENST00000513801 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
ATP2C1-221ENST00000513801 PKNOX2Q96KN3 472 aa17.04■□□□□ 0.32
ATP2C1-221ENST00000513801 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
ATP2C1-221ENST00000513801 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
ATP2C1-221ENST00000513801 CCNB3Q8WWL7 1395 aa17.03■□□□□ 0.32
ATP2C1-221ENST00000513801 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
ATP2C1-221ENST00000513801 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.31
ATP2C1-221ENST00000513801 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
ATP2C1-221ENST00000513801 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
ATP2C1-221ENST00000513801 SLC4A3P48751 1232 aa16.91■□□□□ 0.3
ATP2C1-221ENST00000513801 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
ATP2C1-221ENST00000513801 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
ATP2C1-221ENST00000513801 CUX2O14529 1486 aa16.89■□□□□ 0.29
ATP2C1-221ENST00000513801 C11orf95C9JLR9 678 aaPredicted RBP16.89■□□□□ 0.29
ATP2C1-221ENST00000513801 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
ATP2C1-221ENST00000513801 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
ATP2C1-221ENST00000513801 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
ATP2C1-221ENST00000513801 FRAT1Q92837 279 aaPredicted RBP16.87■□□□□ 0.29
ATP2C1-221ENST00000513801 GSE1Q14687 1217 aa16.85■□□□□ 0.29
ATP2C1-221ENST00000513801 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
ATP2C1-221ENST00000513801 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
ATP2C1-221ENST00000513801 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
ATP2C1-221ENST00000513801 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
ATP2C1-221ENST00000513801 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
ATP2C1-221ENST00000513801 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
ATP2C1-221ENST00000513801 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
ATP2C1-221ENST00000513801 ZMYND15Q9H091 742 aa16.79■□□□□ 0.28
ATP2C1-221ENST00000513801 ZBED9Q6R2W3 1325 aa16.79■□□□□ 0.28
ATP2C1-221ENST00000513801 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
ATP2C1-221ENST00000513801 PDE4AP27815 886 aa16.79■□□□□ 0.28
ATP2C1-221ENST00000513801 NFKBIBQ15653 356 aa16.78■□□□□ 0.28
ATP2C1-221ENST00000513801 USP35Q9P2H5 1018 aa16.77■□□□□ 0.28
ATP2C1-221ENST00000513801 PRKRIP1Q9H875 184 aaPredicted RBP16.76■□□□□ 0.27
ATP2C1-221ENST00000513801 PPM1GO15355 546 aaPredicted RBP16.73■□□□□ 0.27
ATP2C1-221ENST00000513801 EXOC6Q8TAG9 804 aa16.72■□□□□ 0.27
ATP2C1-221ENST00000513801 PHLDB1Q86UU1 1377 aa16.72■□□□□ 0.27
ATP2C1-221ENST00000513801 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
ATP2C1-221ENST00000513801 ARXQ96QS3 562 aa16.69■□□□□ 0.26
ATP2C1-221ENST00000513801 BACH2Q9BYV9 841 aa16.69■□□□□ 0.26
ATP2C1-221ENST00000513801 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
ATP2C1-221ENST00000513801 POLR3GLQ9BT43 218 aa16.67■□□□□ 0.26
ATP2C1-221ENST00000513801 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
ATP2C1-221ENST00000513801 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
ATP2C1-221ENST00000513801 RRAGDQ9NQL2 400 aaPredicted RBP16.65■□□□□ 0.26
ATP2C1-221ENST00000513801 FAM43AQ8N2R8 423 aa16.61■□□□□ 0.25
ATP2C1-221ENST00000513801 PODXL2Q9NZ53 605 aa16.61■□□□□ 0.25
ATP2C1-221ENST00000513801 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
ATP2C1-221ENST00000513801 SMG6Q86US8 1419 aaKnown RBP16.6■□□□□ 0.25
ATP2C1-221ENST00000513801 ARID4BQ4LE39 1312 aaPredicted RBP16.6■□□□□ 0.25
ATP2C1-221ENST00000513801 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
ATP2C1-221ENST00000513801 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
ATP2C1-221ENST00000513801 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
ATP2C1-221ENST00000513801 CNTLNQ9NXG0 1405 aa16.59■□□□□ 0.25
ATP2C1-221ENST00000513801 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.25
ATP2C1-221ENST00000513801 PLIN1O60240 522 aa16.57■□□□□ 0.24
ATP2C1-221ENST00000513801 NAP1L5Q96NT1 182 aaPredicted RBP16.56■□□□□ 0.24
ATP2C1-221ENST00000513801 DAXXQ9UER7 740 aaPredicted RBP16.56■□□□□ 0.24
ATP2C1-221ENST00000513801 GLIPR1L2Q4G1C9 344 aa16.55■□□□□ 0.24
ATP2C1-221ENST00000513801 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
ATP2C1-221ENST00000513801 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
ATP2C1-221ENST00000513801 FOXD1Q16676 465 aa16.55■□□□□ 0.24
ATP2C1-221ENST00000513801 POGKQ9P215 609 aa16.54■□□□□ 0.24
ATP2C1-221ENST00000513801 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
ATP2C1-221ENST00000513801 AQRO60306 1485 aaKnown RBP eCLIP16.52■□□□□ 0.232e-7■■■■■ 33.1
ATP2C1-221ENST00000513801 CCDC7Q96M83 1385 aa16.52■□□□□ 0.23
ATP2C1-221ENST00000513801 PRXQ9BXM0 1461 aa16.52■□□□□ 0.23
ATP2C1-221ENST00000513801 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
ATP2C1-221ENST00000513801 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
ATP2C1-221ENST00000513801 KIF7Q2M1P5 1343 aa16.48■□□□□ 0.23
ATP2C1-221ENST00000513801 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
ATP2C1-221ENST00000513801 A0A0U1RQG5 324 aaPredicted RBP16.47■□□□□ 0.23
ATP2C1-221ENST00000513801 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
ATP2C1-221ENST00000513801 KDM5BQ9UGL1 1544 aa16.47■□□□□ 0.23
ATP2C1-221ENST00000513801 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
ATP2C1-221ENST00000513801 CHIC2Q9UKJ5 165 aa16.46■□□□□ 0.23
ATP2C1-221ENST00000513801 RRP7BPQ9NSQ0 103 aa16.45■□□□□ 0.22
ATP2C1-221ENST00000513801 NCOA2Q15596 1464 aa16.44■□□□□ 0.22
ATP2C1-221ENST00000513801 NBPF8Q3BBV2 869 aa16.44■□□□□ 0.22
ATP2C1-221ENST00000513801 RCAN3Q9UKA8 241 aa16.44■□□□□ 0.22
ATP2C1-221ENST00000513801 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
ATP2C1-221ENST00000513801 MS4A1P11836 297 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms