RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 PTMSP20962 102 aa5.61□□□□□ -1.51
AFP-205ENST00000513720 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.61□□□□□ -1.51
AFP-205ENST00000513720 PSMD1Q99460 953 aa5.6□□□□□ -1.51
AFP-205ENST00000513720 ZMYND15Q9H091 742 aa5.6□□□□□ -1.51
AFP-205ENST00000513720 KDM2AQ9Y2K7 1162 aa5.6□□□□□ -1.51
AFP-205ENST00000513720 NBR1Q14596 966 aa5.59□□□□□ -1.51
AFP-205ENST00000513720 PPARGC1BQ86YN6 1023 aaKnown RBP5.58□□□□□ -1.52
AFP-205ENST00000513720 ZNF592Q92610 1267 aa5.58□□□□□ -1.52
AFP-205ENST00000513720 RTL5Q5HYW3 569 aaPredicted RBP5.57□□□□□ -1.52
AFP-205ENST00000513720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.57□□□□□ -1.52
AFP-205ENST00000513720 NAP1L2Q9ULW6 460 aaPredicted RBP5.57□□□□□ -1.52
AFP-205ENST00000513720 NPM1P06748 294 aaKnown RBP eCLIP5.56□□□□□ -1.52
AFP-205ENST00000513720 FBLN2P98095 1184 aa5.56□□□□□ -1.52
AFP-205ENST00000513720 NEUROD1Q13562 356 aa5.56□□□□□ -1.52
AFP-205ENST00000513720 PPP6R1Q9UPN7 881 aa5.56□□□□□ -1.52
AFP-205ENST00000513720 ARID4BQ4LE39 1312 aaPredicted RBP5.55□□□□□ -1.52
AFP-205ENST00000513720 FKBP8Q14318 412 aa5.55□□□□□ -1.52
AFP-205ENST00000513720 IPO4Q8TEX9 1081 aaKnown RBP5.55□□□□□ -1.52
AFP-205ENST00000513720 PLCD4Q9BRC7 762 aa5.55□□□□□ -1.52
AFP-205ENST00000513720 TEX2Q8IWB9 1127 aa5.54□□□□□ -1.52
AFP-205ENST00000513720 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.54□□□□□ -1.52
AFP-205ENST00000513720 PTMAP06454 111 aaKnown RBP5.53□□□□□ -1.52
AFP-205ENST00000513720 ZFP91Q96JP5 570 aaPredicted RBP5.53□□□□□ -1.52
AFP-205ENST00000513720 NEFMP07197 916 aa5.52□□□□□ -1.53
AFP-205ENST00000513720 BRPF3Q9ULD4 1205 aa5.52□□□□□ -1.53
AFP-205ENST00000513720 SETQ01105 290 aaPredicted RBP5.51□□□□□ -1.53
AFP-205ENST00000513720 FTSJ3Q8IY81 847 aaKnown RBP5.5□□□□□ -1.53
AFP-205ENST00000513720 CNPY4Q8N129 248 aa5.5□□□□□ -1.53
AFP-205ENST00000513720 ZNF526Q8TF50 670 aaPredicted RBP5.5□□□□□ -1.53
AFP-205ENST00000513720 MCCP23508 829 aa5.49□□□□□ -1.53
AFP-205ENST00000513720 CNGB1Q14028 1251 aaPredicted RBP5.48□□□□□ -1.53
AFP-205ENST00000513720 WWC1Q8IX03 1113 aa5.48□□□□□ -1.53
AFP-205ENST00000513720 PRDM10Q9NQV6 1147 aa5.48□□□□□ -1.53
AFP-205ENST00000513720 CANXP27824 592 aaKnown RBP5.47□□□□□ -1.53
AFP-205ENST00000513720 CERS3Q8IU89 383 aa5.46□□□□□ -1.54
AFP-205ENST00000513720 BBXQ8WY36 941 aaPredicted RBP5.46□□□□□ -1.54
AFP-205ENST00000513720 SECISBP2LQ93073 1101 aaKnown RBP5.46□□□□□ -1.54
AFP-205ENST00000513720 CHRM1P11229 460 aaPredicted RBP5.45□□□□□ -1.54
AFP-205ENST00000513720 CC2D2BQ6DHV5 1058 aa5.45□□□□□ -1.54
AFP-205ENST00000513720 USP35Q9P2H5 1018 aa5.45□□□□□ -1.54
AFP-205ENST00000513720 PPM1GO15355 546 aaPredicted RBP5.44□□□□□ -1.54
AFP-205ENST00000513720 CCER1Q8TC90 406 aaPredicted RBP5.44□□□□□ -1.54
AFP-205ENST00000513720 CWC22Q9HCG8 908 aaKnown RBP5.44□□□□□ -1.54
AFP-205ENST00000513720 RAD21O60216 631 aa5.43□□□□□ -1.54
AFP-205ENST00000513720 GRIPAP1Q4V328 841 aa5.43□□□□□ -1.54
AFP-205ENST00000513720 TMED8Q6PL24 325 aaPredicted RBP5.43□□□□□ -1.54
AFP-205ENST00000513720 CHMP4BQ9H444 224 aaKnown RBP5.43□□□□□ -1.54
AFP-205ENST00000513720 SENP3Q9H4L4 574 aaPredicted RBP5.43□□□□□ -1.54
AFP-205ENST00000513720 RBM25P49756 843 aaKnown RBP5.42□□□□□ -1.54
AFP-205ENST00000513720 ANAPC15P60006 121 aa5.42□□□□□ -1.54
AFP-205ENST00000513720 PATL2C9JE40 543 aaKnown RBP5.41□□□□□ -1.54
AFP-205ENST00000513720 CLGNO14967 610 aa5.41□□□□□ -1.54
AFP-205ENST00000513720 FAM193AP78312 1265 aa5.41□□□□□ -1.54
AFP-205ENST00000513720 KCTD17Q8N5Z5 321 aa5.41□□□□□ -1.54
AFP-205ENST00000513720 GPATCH11Q8N954 259 aa5.41□□□□□ -1.54
AFP-205ENST00000513720 ANP32BQ92688 251 aaKnown RBP5.41□□□□□ -1.54
AFP-205ENST00000513720 DNAJC2Q99543 621 aaKnown RBP5.41□□□□□ -1.54
AFP-205ENST00000513720 TSHZ2Q9NRE2 1034 aa5.41□□□□□ -1.54
AFP-205ENST00000513720 ZBTB22O15209 634 aa5.4□□□□□ -1.54
AFP-205ENST00000513720 OS9Q13438 667 aaPredicted RBP5.4□□□□□ -1.54
AFP-205ENST00000513720 RNF216Q9NWF9 866 aaPredicted RBP5.4□□□□□ -1.54
AFP-205ENST00000513720 ZNF692Q9BU19 519 aaPredicted RBP5.39□□□□□ -1.55
AFP-205ENST00000513720 PRDM16Q9HAZ2 1276 aa5.39□□□□□ -1.55
AFP-205ENST00000513720 CCDC27Q2M243 656 aa5.38□□□□□ -1.55
AFP-205ENST00000513720 FAM177A1Q8N128 213 aaPredicted RBP5.38□□□□□ -1.55
AFP-205ENST00000513720 NECTIN2Q92692 538 aa5.38□□□□□ -1.55
AFP-205ENST00000513720 MAFGO15525 162 aa5.37□□□□□ -1.55
AFP-205ENST00000513720 PHF14O94880 888 aa5.37□□□□□ -1.55
AFP-205ENST00000513720 AXDND1Q5T1B0 1012 aaPredicted RBP5.37□□□□□ -1.55
AFP-205ENST00000513720 ZNF622Q969S3 477 aaKnown RBP eCLIP5.37□□□□□ -1.55
AFP-205ENST00000513720 RRP9O43818 475 aaKnown RBP5.36□□□□□ -1.55
AFP-205ENST00000513720 PCGF6Q9BYE7 350 aa5.35□□□□□ -1.55
AFP-205ENST00000513720 APPP05067 770 aa5.34□□□□□ -1.55
AFP-205ENST00000513720 HSP90AA2PQ14568 343 aaPredicted RBP5.34□□□□□ -1.55
AFP-205ENST00000513720 HSP90AB4PQ58FF6 505 aa5.34□□□□□ -1.55
AFP-205ENST00000513720 FAM43BQ6ZT52 329 aaPredicted RBP5.34□□□□□ -1.55
AFP-205ENST00000513720 MTMR7Q9Y216 660 aa5.34□□□□□ -1.55
AFP-205ENST00000513720 VGFO15240 615 aaPredicted RBP5.33□□□□□ -1.56
AFP-205ENST00000513720 GTF2E1P29083 439 aaPredicted RBP5.33□□□□□ -1.56
AFP-205ENST00000513720 FOXD4L5Q5VV16 416 aaPredicted RBP5.33□□□□□ -1.56
AFP-205ENST00000513720 FOXD4L4Q8WXT5 416 aaPredicted RBP5.33□□□□□ -1.56
AFP-205ENST00000513720 ZNF428Q96B54 188 aa5.32□□□□□ -1.56
AFP-205ENST00000513720 KCNG1Q9UIX4 513 aa5.32□□□□□ -1.56
AFP-205ENST00000513720 PLEKHD1A6NEE1 506 aa5.31□□□□□ -1.56
AFP-205ENST00000513720 E9PSI1 815 aa5.31□□□□□ -1.56
AFP-205ENST00000513720 KDM4AO75164 1064 aa5.31□□□□□ -1.56
AFP-205ENST00000513720 FAM50AQ14320 339 aaKnown RBP5.31□□□□□ -1.56
AFP-205ENST00000513720 RGS22Q8NE09 1264 aa5.31□□□□□ -1.56
AFP-205ENST00000513720 TRIM44Q96DX7 344 aaPredicted RBP5.31□□□□□ -1.56
AFP-205ENST00000513720 STAC3Q96MF2 364 aa5.31□□□□□ -1.56
AFP-205ENST00000513720 IRX3P78415 501 aaPredicted RBP5.3□□□□□ -1.56
AFP-205ENST00000513720 CALD1Q05682 793 aaKnown RBP5.3□□□□□ -1.56
AFP-205ENST00000513720 LAS1LQ9Y4W2 734 aaKnown RBP5.3□□□□□ -1.56
AFP-205ENST00000513720 TMCO4Q5TGY1 634 aa5.29□□□□□ -1.56
AFP-205ENST00000513720 EXOC8Q8IYI6 725 aa5.29□□□□□ -1.56
AFP-205ENST00000513720 HSP90AA1P07900 732 aaKnown RBP5.28□□□□□ -1.56
AFP-205ENST00000513720 ANP32AP39687 249 aaKnown RBP5.28□□□□□ -1.56
AFP-205ENST00000513720 AEBP1Q8IUX7 1158 aa5.28□□□□□ -1.56
AFP-205ENST00000513720 FAM9BQ8IZU0 186 aa5.28□□□□□ -1.56
AFP-205ENST00000513720 IL27Q8NEV9 243 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms