RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-210ENST00000513582 CLIP1P30622 1438 aa15.46■□□□□ 0.06
PDCD6-210ENST00000513582 HNRNPUQ00839 825 aaKnown RBP eCLIP15.44■□□□□ 0.06
PDCD6-210ENST00000513582 POLR3GLQ9BT43 218 aa15.43■□□□□ 0.06
PDCD6-210ENST00000513582 UBE2Q2Q8WVN8 375 aa15.42■□□□□ 0.06
PDCD6-210ENST00000513582 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
PDCD6-210ENST00000513582 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
PDCD6-210ENST00000513582 UNC13AQ9UPW8 1703 aa15.41■□□□□ 0.06
PDCD6-210ENST00000513582 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
PDCD6-210ENST00000513582 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
PDCD6-210ENST00000513582 EIF5BO60841 1220 aaKnown RBP15.38■□□□□ 0.05
PDCD6-210ENST00000513582 CCER2I3L3R5 266 aa15.38■□□□□ 0.05
PDCD6-210ENST00000513582 PPP4R2Q9NY27 417 aa15.36■□□□□ 0.05
PDCD6-210ENST00000513582 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
PDCD6-210ENST00000513582 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
PDCD6-210ENST00000513582 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
PDCD6-210ENST00000513582 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
PDCD6-210ENST00000513582 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
PDCD6-210ENST00000513582 ANP32AP39687 249 aaKnown RBP15.29■□□□□ 0.04
PDCD6-210ENST00000513582 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
PDCD6-210ENST00000513582 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
PDCD6-210ENST00000513582 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
PDCD6-210ENST00000513582 KIF21BO75037 1637 aa15.27■□□□□ 0.03
PDCD6-210ENST00000513582 WDR97A6NE52 1622 aa15.26■□□□□ 0.03
PDCD6-210ENST00000513582 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
PDCD6-210ENST00000513582 IPO9Q96P70 1041 aaKnown RBP15.25■□□□□ 0.03
PDCD6-210ENST00000513582 LAS1LQ9Y4W2 734 aaKnown RBP15.23■□□□□ 0.03
PDCD6-210ENST00000513582 RAB3GAP2Q9H2M9 1393 aa15.22■□□□□ 0.03
PDCD6-210ENST00000513582 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
PDCD6-210ENST00000513582 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
PDCD6-210ENST00000513582 NEFMP07197 916 aa15.2■□□□□ 0.02
PDCD6-210ENST00000513582 CHIC2Q9UKJ5 165 aa15.18■□□□□ 0.02
PDCD6-210ENST00000513582 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
PDCD6-210ENST00000513582 ZNF326Q5BKZ1 582 aaKnown RBP15.17■□□□□ 0.02
PDCD6-210ENST00000513582 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
PDCD6-210ENST00000513582 CCNB3Q8WWL7 1395 aa15.16■□□□□ 0.02
PDCD6-210ENST00000513582 FAM9BQ8IZU0 186 aa15.15■□□□□ 0.02
PDCD6-210ENST00000513582 TIMELESSQ9UNS1 1208 aa15.13■□□□□ 0.01
PDCD6-210ENST00000513582 PKNOX2Q96KN3 472 aa15.12■□□□□ 0.01
PDCD6-210ENST00000513582 RRBP1Q9P2E9 1410 aaKnown RBP15.11■□□□□ 0.01
PDCD6-210ENST00000513582 CCDC184Q52MB2 194 aa15.1■□□□□ 0.01
PDCD6-210ENST00000513582 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
PDCD6-210ENST00000513582 FBLN2P98095 1184 aa15.09■□□□□ 0.01
PDCD6-210ENST00000513582 TOP2BQ02880 1626 aa15.08■□□□□ 0
PDCD6-210ENST00000513582 CUX2O14529 1486 aa15.07■□□□□ 0
PDCD6-210ENST00000513582 KIF27Q86VH2 1401 aa15.06■□□□□ 0
PDCD6-210ENST00000513582 RRP7BPQ9NSQ0 103 aa15.03■□□□□ -0
PDCD6-210ENST00000513582 ERICH3Q5RHP9 1530 aa15.03■□□□□ -0
PDCD6-210ENST00000513582 SETD5Q9C0A6 1442 aa15.03■□□□□ -0
PDCD6-210ENST00000513582 C11orf95C9JLR9 678 aaPredicted RBP15.02■□□□□ -0
PDCD6-210ENST00000513582 WASHC2CQ9Y4E1 1318 aa15.01□□□□□ -0.01
PDCD6-210ENST00000513582 MRS2Q9HD23 443 aa15.01□□□□□ -0.01
PDCD6-210ENST00000513582 PRXQ9BXM0 1461 aa15□□□□□ -0.01
PDCD6-210ENST00000513582 TONSLQ96HA7 1378 aa15□□□□□ -0.01
PDCD6-210ENST00000513582 USP35Q9P2H5 1018 aa14.99□□□□□ -0.01
PDCD6-210ENST00000513582 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
PDCD6-210ENST00000513582 ZNF777Q9ULD5 760 aaPredicted RBP14.98□□□□□ -0.01
PDCD6-210ENST00000513582 GSE1Q14687 1217 aa14.97□□□□□ -0.01
PDCD6-210ENST00000513582 AKNAQ7Z591 1439 aa14.97□□□□□ -0.01
PDCD6-210ENST00000513582 BIVM-ERCC5R4GMW8 1640 aa14.97□□□□□ -0.01
PDCD6-210ENST00000513582 NCAPD3P42695 1498 aa14.95□□□□□ -0.02
PDCD6-210ENST00000513582 ZBED9Q6R2W3 1325 aa14.95□□□□□ -0.02
PDCD6-210ENST00000513582 PPM1GO15355 546 aaPredicted RBP14.94□□□□□ -0.02
PDCD6-210ENST00000513582 FRAT1Q92837 279 aaPredicted RBP14.93□□□□□ -0.02
PDCD6-210ENST00000513582 FOXD1Q16676 465 aa14.93□□□□□ -0.02
PDCD6-210ENST00000513582 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
PDCD6-210ENST00000513582 RSPH6AQ9H0K4 717 aa14.91□□□□□ -0.02
PDCD6-210ENST00000513582 CUX1P39880 1505 aa14.91□□□□□ -0.02
PDCD6-210ENST00000513582 VSIG10Q8N0Z9 540 aa14.9□□□□□ -0.02
PDCD6-210ENST00000513582 HSPA5P11021 654 aaKnown RBP14.89□□□□□ -0.03
PDCD6-210ENST00000513582 SLC4A3P48751 1232 aa14.89□□□□□ -0.03
PDCD6-210ENST00000513582 PDE4AP27815 886 aa14.88□□□□□ -0.03
PDCD6-210ENST00000513582 NFKBIBQ15653 356 aa14.87□□□□□ -0.03
PDCD6-210ENST00000513582 PRKRIP1Q9H875 184 aaPredicted RBP14.87□□□□□ -0.03
PDCD6-210ENST00000513582 CFTRP13569 1480 aa14.86□□□□□ -0.03
PDCD6-210ENST00000513582 CARMIL1Q5VZK9 1371 aa14.85□□□□□ -0.03
PDCD6-210ENST00000513582 GLIPR1L2Q4G1C9 344 aa14.85□□□□□ -0.03
PDCD6-210ENST00000513582 ZMYND15Q9H091 742 aa14.85□□□□□ -0.03
PDCD6-210ENST00000513582 MTUS2Q5JR59 1369 aa14.84□□□□□ -0.03
PDCD6-210ENST00000513582 ARHGAP35Q9NRY4 1499 aa14.84□□□□□ -0.03
PDCD6-210ENST00000513582 NUDCQ9Y266 331 aa14.83□□□□□ -0.04
PDCD6-210ENST00000513582 TDRD9Q8NDG6 1382 aaKnown RBP14.82□□□□□ -0.04
PDCD6-210ENST00000513582 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
PDCD6-210ENST00000513582 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
PDCD6-210ENST00000513582 DAXXQ9UER7 740 aaPredicted RBP14.81□□□□□ -0.04
PDCD6-210ENST00000513582 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
PDCD6-210ENST00000513582 SKAP1Q86WV1 359 aa14.8□□□□□ -0.04
PDCD6-210ENST00000513582 DCAF11Q8TEB1 546 aa14.8□□□□□ -0.04
PDCD6-210ENST00000513582 BACH2Q9BYV9 841 aa14.8□□□□□ -0.04
PDCD6-210ENST00000513582 TCERG1O14776 1098 aaKnown RBP14.79□□□□□ -0.04
PDCD6-210ENST00000513582 FAM43AQ8N2R8 423 aa14.79□□□□□ -0.04
PDCD6-210ENST00000513582 IGF1RP08069 1367 aa14.79□□□□□ -0.04
PDCD6-210ENST00000513582 EIF4G2P78344 907 aaKnown RBP eCLIP14.78□□□□□ -0.042e-7■■■■■ 43.7
PDCD6-210ENST00000513582 EXOC6Q8TAG9 804 aa14.78□□□□□ -0.04
PDCD6-210ENST00000513582 KDM2AQ9Y2K7 1162 aa14.78□□□□□ -0.04
PDCD6-210ENST00000513582 FHOD3Q2V2M9 1422 aa14.77□□□□□ -0.04
PDCD6-210ENST00000513582 SMG6Q86US8 1419 aaKnown RBP14.77□□□□□ -0.04
PDCD6-210ENST00000513582 CNTLNQ9NXG0 1405 aa14.77□□□□□ -0.04
PDCD6-210ENST00000513582 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
PDCD6-210ENST00000513582 CADPSQ9ULU8 1353 aa14.76□□□□□ -0.05
PDCD6-210ENST00000513582 FRAT2O75474 233 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms