RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ERICH3Q5RHP9 1530 aa20.49■□□□□ 0.87
RNF4-218ENST00000513284 NPM1P06748 294 aaKnown RBP eCLIP20.48■□□□□ 0.87
RNF4-218ENST00000513284 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
RNF4-218ENST00000513284 DIP2BQ9P265 1576 aa20.46■□□□□ 0.87
RNF4-218ENST00000513284 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
RNF4-218ENST00000513284 BIVM-ERCC5R4GMW8 1640 aa20.43■□□□□ 0.86
RNF4-218ENST00000513284 ADCY10Q96PN6 1610 aa20.42■□□□□ 0.86
RNF4-218ENST00000513284 KDM6BO15054 1643 aa20.4■□□□□ 0.86
RNF4-218ENST00000513284 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
RNF4-218ENST00000513284 TSPOAP1O95153 1857 aa20.35■□□□□ 0.85
RNF4-218ENST00000513284 SUPT5HO00267 1087 aaKnown RBP20.31■□□□□ 0.84
RNF4-218ENST00000513284 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.83
RNF4-218ENST00000513284 IGF1RP08069 1367 aa20.23■□□□□ 0.83
RNF4-218ENST00000513284 PTPRGP23470 1445 aa20.21■□□□□ 0.83
RNF4-218ENST00000513284 ADGRL1O94910 1474 aa20.21■□□□□ 0.83
RNF4-218ENST00000513284 COL17A1Q9UMD9 1497 aaPredicted RBP20.21■□□□□ 0.83
RNF4-218ENST00000513284 PPRC1Q5VV67 1664 aaKnown RBP20.19■□□□□ 0.82
RNF4-218ENST00000513284 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
RNF4-218ENST00000513284 ASXL2Q76L83 1435 aa20.16■□□□□ 0.82
RNF4-218ENST00000513284 GLI2P10070 1586 aa20.14■□□□□ 0.81
RNF4-218ENST00000513284 ABCC2Q92887 1545 aa20.14■□□□□ 0.81
RNF4-218ENST00000513284 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
RNF4-218ENST00000513284 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
RNF4-218ENST00000513284 HECW2Q9P2P5 1572 aa20.1■□□□□ 0.81
RNF4-218ENST00000513284 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
RNF4-218ENST00000513284 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
RNF4-218ENST00000513284 CARMIL2Q6F5E8 1435 aa20.02■□□□□ 0.8
RNF4-218ENST00000513284 UACAQ9BZF9 1416 aa20.02■□□□□ 0.8
RNF4-218ENST00000513284 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.8
RNF4-218ENST00000513284 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
RNF4-218ENST00000513284 CUL7Q14999 1698 aa20.02■□□□□ 0.8
RNF4-218ENST00000513284 MAP3K4Q9Y6R4 1608 aa20■□□□□ 0.79
RNF4-218ENST00000513284 KDM5BQ9UGL1 1544 aa19.98■□□□□ 0.79
RNF4-218ENST00000513284 DISP1Q96F81 1524 aa19.97■□□□□ 0.79
RNF4-218ENST00000513284 TEX14Q8IWB6 1497 aa19.92■□□□□ 0.78
RNF4-218ENST00000513284 IQGAP2Q13576 1575 aa19.92■□□□□ 0.78
RNF4-218ENST00000513284 FBXO41Q8TF61 875 aa19.91■□□□□ 0.78
RNF4-218ENST00000513284 ZCCHC11Q5TAX3 1644 aaKnown RBP19.89■□□□□ 0.77
RNF4-218ENST00000513284 UGGT2Q9NYU1 1516 aa19.83■□□□□ 0.77
RNF4-218ENST00000513284 WDR7Q9Y4E6 1490 aa19.82■□□□□ 0.76
RNF4-218ENST00000513284 KCNH8Q96L42 1107 aa19.81■□□□□ 0.76
RNF4-218ENST00000513284 CD109Q6YHK3 1445 aa19.81■□□□□ 0.76
RNF4-218ENST00000513284 MAGI3Q5TCQ9 1506 aa19.8■□□□□ 0.76
RNF4-218ENST00000513284 KIAA0556O60303 1618 aa19.76■□□□□ 0.75
RNF4-218ENST00000513284 KIF21BO75037 1637 aa19.73■□□□□ 0.75
RNF4-218ENST00000513284 RAPGEF2Q9Y4G8 1499 aa19.73■□□□□ 0.75
RNF4-218ENST00000513284 CFAP43Q8NDM7 1665 aa19.71■□□□□ 0.75
RNF4-218ENST00000513284 PTPRMP28827 1452 aa19.68■□□□□ 0.74
RNF4-218ENST00000513284 ARAP3Q8WWN8 1544 aa19.67■□□□□ 0.74
RNF4-218ENST00000513284 ABCA8O94911 1581 aa19.67■□□□□ 0.74
RNF4-218ENST00000513284 ADAMTSL3P82987 1691 aa19.65■□□□□ 0.74
RNF4-218ENST00000513284 RAPGEF3O95398 923 aa19.63■□□□□ 0.73
RNF4-218ENST00000513284 ARID3CA6NKF2 412 aa19.58■□□□□ 0.72
RNF4-218ENST00000513284 ATP10BO94823 1461 aa19.57■□□□□ 0.72
RNF4-218ENST00000513284 LMTK3Q96Q04 1460 aa19.57■□□□□ 0.72
RNF4-218ENST00000513284 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
RNF4-218ENST00000513284 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
RNF4-218ENST00000513284 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
RNF4-218ENST00000513284 BCORL1Q5H9F3 1711 aa19.51■□□□□ 0.71
RNF4-218ENST00000513284 HSPA2P54652 639 aa19.51■□□□□ 0.71
RNF4-218ENST00000513284 CTTNBP2Q8WZ74 1663 aa19.5■□□□□ 0.71
RNF4-218ENST00000513284 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
RNF4-218ENST00000513284 MADDQ8WXG6 1647 aa19.5■□□□□ 0.71
RNF4-218ENST00000513284 ARID4BQ4LE39 1312 aaPredicted RBP19.5■□□□□ 0.71
RNF4-218ENST00000513284 ABCA9Q8IUA7 1624 aa19.48■□□□□ 0.71
RNF4-218ENST00000513284 FRMPD1Q5SYB0 1578 aa19.47■□□□□ 0.71
RNF4-218ENST00000513284 CERKQ8TCT0 537 aa19.46■□□□□ 0.71
RNF4-218ENST00000513284 NEO1Q92859 1461 aa19.46■□□□□ 0.71
RNF4-218ENST00000513284 ILDR2Q71H61 639 aa19.45■□□□□ 0.7
RNF4-218ENST00000513284 PRXQ9BXM0 1461 aa19.42■□□□□ 0.7
RNF4-218ENST00000513284 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
RNF4-218ENST00000513284 RIMS1Q86UR5 1692 aaKnown RBP19.39■□□□□ 0.69
RNF4-218ENST00000513284 SOCS7O14512 581 aa19.34■□□□□ 0.69
RNF4-218ENST00000513284 SIGLEC1Q9BZZ2 1709 aa19.34■□□□□ 0.69
RNF4-218ENST00000513284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.33■□□□□ 0.68
RNF4-218ENST00000513284 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
RNF4-218ENST00000513284 FAM9AQ8IZU1 332 aaPredicted RBP19.33■□□□□ 0.68
RNF4-218ENST00000513284 DENND4BO75064 1496 aaPredicted RBP19.33■□□□□ 0.68
RNF4-218ENST00000513284 ARHGEF40Q8TER5 1519 aa19.32■□□□□ 0.68
RNF4-218ENST00000513284 FHOD3Q2V2M9 1422 aa19.32■□□□□ 0.68
RNF4-218ENST00000513284 AKNAQ7Z591 1439 aa19.32■□□□□ 0.68
RNF4-218ENST00000513284 RICTORQ6R327 1708 aa19.31■□□□□ 0.68
RNF4-218ENST00000513284 YEATS2Q9ULM3 1422 aa19.3■□□□□ 0.68
RNF4-218ENST00000513284 DISP3Q9P2K9 1392 aa19.3■□□□□ 0.68
RNF4-218ENST00000513284 RAPGEF6Q8TEU7 1601 aa19.29■□□□□ 0.68
RNF4-218ENST00000513284 NUP153P49790 1475 aaKnown RBP19.28■□□□□ 0.68
RNF4-218ENST00000513284 MLECQ14165 292 aa19.28■□□□□ 0.68
RNF4-218ENST00000513284 SAMD9Q5K651 1589 aa19.27■□□□□ 0.67
RNF4-218ENST00000513284 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
RNF4-218ENST00000513284 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
RNF4-218ENST00000513284 FANCAO15360 1455 aa19.24■□□□□ 0.67
RNF4-218ENST00000513284 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
RNF4-218ENST00000513284 ZMYM4Q5VZL5 1548 aa19.22■□□□□ 0.67
RNF4-218ENST00000513284 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.21■□□□□ 0.67
RNF4-218ENST00000513284 ZFYVE16Q7Z3T8 1539 aa19.2■□□□□ 0.66
RNF4-218ENST00000513284 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
RNF4-218ENST00000513284 TTC37Q6PGP7 1564 aa19.19■□□□□ 0.66
RNF4-218ENST00000513284 HECW1Q76N89 1606 aa19.18■□□□□ 0.66
RNF4-218ENST00000513284 STRCQ7RTU9 1775 aa19.17■□□□□ 0.66
RNF4-218ENST00000513284 EFCAB5A4FU69 1503 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms