RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TSPOAP1O95153 1857 aa18.23■□□□□ 0.51
CLCN3-208ENST00000512813 CUX1P39880 1505 aa18.2■□□□□ 0.5
CLCN3-208ENST00000512813 SOCS7O14512 581 aa18.18■□□□□ 0.5
CLCN3-208ENST00000512813 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
CLCN3-208ENST00000512813 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLCN3-208ENST00000512813 PRG4Q92954 1404 aaPredicted RBP18.15■□□□□ 0.5
CLCN3-208ENST00000512813 ADCY10Q96PN6 1610 aa18.15■□□□□ 0.5
CLCN3-208ENST00000512813 ABCA10Q8WWZ4 1543 aa18.14■□□□□ 0.49
CLCN3-208ENST00000512813 PPRC1Q5VV67 1664 aaKnown RBP18.07■□□□□ 0.48
CLCN3-208ENST00000512813 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
CLCN3-208ENST00000512813 TOP2BQ02880 1626 aa18.03■□□□□ 0.48
CLCN3-208ENST00000512813 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
CLCN3-208ENST00000512813 JPH4Q96JJ6 628 aa18■□□□□ 0.47
CLCN3-208ENST00000512813 COL17A1Q9UMD9 1497 aaPredicted RBP17.99■□□□□ 0.47
CLCN3-208ENST00000512813 GLI2P10070 1586 aa17.97■□□□□ 0.47
CLCN3-208ENST00000512813 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
CLCN3-208ENST00000512813 RUSC2Q8N2Y8 1516 aa17.96■□□□□ 0.47
CLCN3-208ENST00000512813 ERICH3Q5RHP9 1530 aa17.9■□□□□ 0.46
CLCN3-208ENST00000512813 PLB1Q6P1J6 1458 aa17.86■□□□□ 0.45
CLCN3-208ENST00000512813 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
CLCN3-208ENST00000512813 TEX14Q8IWB6 1497 aa17.84■□□□□ 0.45
CLCN3-208ENST00000512813 ASXL2Q76L83 1435 aa17.83■□□□□ 0.45
CLCN3-208ENST00000512813 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
CLCN3-208ENST00000512813 SPATA31D1Q6ZQQ2 1576 aa17.81■□□□□ 0.44
CLCN3-208ENST00000512813 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
CLCN3-208ENST00000512813 PCF11O94913 1555 aaKnown RBP17.77■□□□□ 0.44
CLCN3-208ENST00000512813 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
CLCN3-208ENST00000512813 KIF21BO75037 1637 aa17.74■□□□□ 0.43
CLCN3-208ENST00000512813 PTPRMP28827 1452 aa17.73■□□□□ 0.43
CLCN3-208ENST00000512813 CUL7Q14999 1698 aa17.73■□□□□ 0.43
CLCN3-208ENST00000512813 KIAA0586Q9BVV6 1533 aa17.72■□□□□ 0.43
CLCN3-208ENST00000512813 CERKQ8TCT0 537 aa17.71■□□□□ 0.43
CLCN3-208ENST00000512813 PTPRGP23470 1445 aa17.71■□□□□ 0.43
CLCN3-208ENST00000512813 ADAMTSL3P82987 1691 aa17.68■□□□□ 0.42
CLCN3-208ENST00000512813 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
CLCN3-208ENST00000512813 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
CLCN3-208ENST00000512813 TNIKQ9UKE5 1360 aa17.6■□□□□ 0.41
CLCN3-208ENST00000512813 KDM5BQ9UGL1 1544 aa17.6■□□□□ 0.41
CLCN3-208ENST00000512813 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
CLCN3-208ENST00000512813 UACAQ9BZF9 1416 aa17.55■□□□□ 0.4
CLCN3-208ENST00000512813 ZCCHC11Q5TAX3 1644 aaKnown RBP17.54■□□□□ 0.4
CLCN3-208ENST00000512813 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
CLCN3-208ENST00000512813 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
CLCN3-208ENST00000512813 MADDQ8WXG6 1647 aa17.53■□□□□ 0.4
CLCN3-208ENST00000512813 BCORL1Q5H9F3 1711 aa17.52■□□□□ 0.39
CLCN3-208ENST00000512813 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.39
CLCN3-208ENST00000512813 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
CLCN3-208ENST00000512813 HSPA2P54652 639 aa17.49■□□□□ 0.39
CLCN3-208ENST00000512813 CD109Q6YHK3 1445 aa17.48■□□□□ 0.39
CLCN3-208ENST00000512813 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
CLCN3-208ENST00000512813 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
CLCN3-208ENST00000512813 IQGAP2Q13576 1575 aa17.38■□□□□ 0.37
CLCN3-208ENST00000512813 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
CLCN3-208ENST00000512813 IGF1RP08069 1367 aa17.33■□□□□ 0.36
CLCN3-208ENST00000512813 ARID4BQ4LE39 1312 aaPredicted RBP17.3■□□□□ 0.36
CLCN3-208ENST00000512813 PHLDB1Q86UU1 1377 aa17.29■□□□□ 0.36
CLCN3-208ENST00000512813 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
CLCN3-208ENST00000512813 IQSEC2Q5JU85 1478 aa17.28■□□□□ 0.36
CLCN3-208ENST00000512813 YEATS2Q9ULM3 1422 aa17.28■□□□□ 0.36
CLCN3-208ENST00000512813 FRMPD1Q5SYB0 1578 aa17.28■□□□□ 0.36
CLCN3-208ENST00000512813 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
CLCN3-208ENST00000512813 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
CLCN3-208ENST00000512813 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
CLCN3-208ENST00000512813 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
CLCN3-208ENST00000512813 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
CLCN3-208ENST00000512813 UGGT2Q9NYU1 1516 aa17.24■□□□□ 0.35
CLCN3-208ENST00000512813 PREX1Q8TCU6 1659 aa17.23■□□□□ 0.35
CLCN3-208ENST00000512813 RAPGEF3O95398 923 aa17.23■□□□□ 0.35
CLCN3-208ENST00000512813 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
CLCN3-208ENST00000512813 KIF27Q86VH2 1401 aa17.21■□□□□ 0.35
CLCN3-208ENST00000512813 LTBP4Q8N2S1 1624 aa17.21■□□□□ 0.35
CLCN3-208ENST00000512813 NEO1Q92859 1461 aa17.19■□□□□ 0.34
CLCN3-208ENST00000512813 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
CLCN3-208ENST00000512813 CARMIL1Q5VZK9 1371 aa17.18■□□□□ 0.34
CLCN3-208ENST00000512813 POGZQ7Z3K3 1410 aa17.18■□□□□ 0.34
CLCN3-208ENST00000512813 FANCAO15360 1455 aa17.18■□□□□ 0.34
CLCN3-208ENST00000512813 ABCA9Q8IUA7 1624 aa17.18■□□□□ 0.34
CLCN3-208ENST00000512813 ABCA8O94911 1581 aa17.16■□□□□ 0.34
CLCN3-208ENST00000512813 PTPRTO14522 1441 aa17.16■□□□□ 0.34
CLCN3-208ENST00000512813 FER1L4A9Z1Z3 1794 aa17.16■□□□□ 0.34
CLCN3-208ENST00000512813 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
CLCN3-208ENST00000512813 SIGLEC1Q9BZZ2 1709 aa17.12■□□□□ 0.33
CLCN3-208ENST00000512813 AKNAQ7Z591 1439 aa17.09■□□□□ 0.33
CLCN3-208ENST00000512813 RICTORQ6R327 1708 aa17.09■□□□□ 0.33
CLCN3-208ENST00000512813 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
CLCN3-208ENST00000512813 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
CLCN3-208ENST00000512813 ARHGEF12Q9NZN5 1544 aa17.04■□□□□ 0.32
CLCN3-208ENST00000512813 DENND4BO75064 1496 aaPredicted RBP17.04■□□□□ 0.32
CLCN3-208ENST00000512813 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
CLCN3-208ENST00000512813 ZFYVE16Q7Z3T8 1539 aa17.03■□□□□ 0.32
CLCN3-208ENST00000512813 EFCAB5A4FU69 1503 aa17.02■□□□□ 0.32
CLCN3-208ENST00000512813 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
CLCN3-208ENST00000512813 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
CLCN3-208ENST00000512813 MLECQ14165 292 aa16.97■□□□□ 0.31
CLCN3-208ENST00000512813 ATP10BO94823 1461 aa16.97■□□□□ 0.31
CLCN3-208ENST00000512813 MAGI2Q86UL8 1455 aa16.97■□□□□ 0.31
CLCN3-208ENST00000512813 SETD1BQ9UPS6 1966 aaKnown RBP16.97■□□□□ 0.31
CLCN3-208ENST00000512813 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
CLCN3-208ENST00000512813 NCOA1Q15788 1441 aa16.94■□□□□ 0.3
CLCN3-208ENST00000512813 CFAP74Q9C0B2 1584 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms