RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 KDM4FA0A1W2PPD8 638 aa21.01■□□□□ 0.95
RNF4-216ENST00000511859 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
RNF4-216ENST00000511859 TOP2BQ02880 1626 aa20.98■□□□□ 0.95
RNF4-216ENST00000511859 BIVM-ERCC5R4GMW8 1640 aa20.97■□□□□ 0.95
RNF4-216ENST00000511859 DIP2BQ9P265 1576 aa20.94■□□□□ 0.94
RNF4-216ENST00000511859 ILDR1Q86SU0 546 aaPredicted RBP20.93■□□□□ 0.94
RNF4-216ENST00000511859 KDM6BO15054 1643 aa20.92■□□□□ 0.94
RNF4-216ENST00000511859 ADCY10Q96PN6 1610 aa20.87■□□□□ 0.93
RNF4-216ENST00000511859 RUSC2Q8N2Y8 1516 aa20.86■□□□□ 0.93
RNF4-216ENST00000511859 TSPOAP1O95153 1857 aa20.86■□□□□ 0.93
RNF4-216ENST00000511859 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
RNF4-216ENST00000511859 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
RNF4-216ENST00000511859 PTPRGP23470 1445 aa20.71■□□□□ 0.91
RNF4-216ENST00000511859 IGF1RP08069 1367 aa20.67■□□□□ 0.9
RNF4-216ENST00000511859 PLB1Q6P1J6 1458 aa20.66■□□□□ 0.9
RNF4-216ENST00000511859 ADGRL1O94910 1474 aa20.65■□□□□ 0.9
RNF4-216ENST00000511859 ABCC2Q92887 1545 aa20.65■□□□□ 0.9
RNF4-216ENST00000511859 GLI2P10070 1586 aa20.64■□□□□ 0.9
RNF4-216ENST00000511859 ASXL2Q76L83 1435 aa20.63■□□□□ 0.89
RNF4-216ENST00000511859 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
RNF4-216ENST00000511859 CUL7Q14999 1698 aa20.62■□□□□ 0.89
RNF4-216ENST00000511859 CARMIL2Q6F5E8 1435 aa20.62■□□□□ 0.89
RNF4-216ENST00000511859 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
RNF4-216ENST00000511859 PPRC1Q5VV67 1664 aaKnown RBP20.61■□□□□ 0.89
RNF4-216ENST00000511859 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
RNF4-216ENST00000511859 UHRF1BP1LA0JNW5 1464 aa20.56■□□□□ 0.88
RNF4-216ENST00000511859 COL17A1Q9UMD9 1497 aaPredicted RBP20.54■□□□□ 0.88
RNF4-216ENST00000511859 HECW2Q9P2P5 1572 aa20.53■□□□□ 0.88
RNF4-216ENST00000511859 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
RNF4-216ENST00000511859 UACAQ9BZF9 1416 aa20.52■□□□□ 0.88
RNF4-216ENST00000511859 TEX14Q8IWB6 1497 aa20.51■□□□□ 0.87
RNF4-216ENST00000511859 EPRSP07814 1512 aaKnown RBP20.49■□□□□ 0.87
RNF4-216ENST00000511859 MAP3K4Q9Y6R4 1608 aa20.48■□□□□ 0.87
RNF4-216ENST00000511859 KDM5BQ9UGL1 1544 aa20.46■□□□□ 0.87
RNF4-216ENST00000511859 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
RNF4-216ENST00000511859 DISP1Q96F81 1524 aa20.4■□□□□ 0.86
RNF4-216ENST00000511859 FBXO41Q8TF61 875 aa20.38■□□□□ 0.85
RNF4-216ENST00000511859 ZCCHC11Q5TAX3 1644 aaKnown RBP20.37■□□□□ 0.85
RNF4-216ENST00000511859 UGGT2Q9NYU1 1516 aa20.33■□□□□ 0.84
RNF4-216ENST00000511859 WDR7Q9Y4E6 1490 aa20.33■□□□□ 0.84
RNF4-216ENST00000511859 MAGI3Q5TCQ9 1506 aa20.3■□□□□ 0.84
RNF4-216ENST00000511859 CD109Q6YHK3 1445 aa20.3■□□□□ 0.84
RNF4-216ENST00000511859 CFAP43Q8NDM7 1665 aa20.26■□□□□ 0.83
RNF4-216ENST00000511859 KIAA0556O60303 1618 aa20.26■□□□□ 0.83
RNF4-216ENST00000511859 KCNH8Q96L42 1107 aa20.26■□□□□ 0.83
RNF4-216ENST00000511859 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
RNF4-216ENST00000511859 KIF21BO75037 1637 aa20.18■□□□□ 0.82
RNF4-216ENST00000511859 ARAP3Q8WWN8 1544 aa20.16■□□□□ 0.82
RNF4-216ENST00000511859 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
RNF4-216ENST00000511859 PHLDB1Q86UU1 1377 aa20.14■□□□□ 0.81
RNF4-216ENST00000511859 PTPRMP28827 1452 aa20.13■□□□□ 0.81
RNF4-216ENST00000511859 ABCA8O94911 1581 aa20.12■□□□□ 0.81
RNF4-216ENST00000511859 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
RNF4-216ENST00000511859 ADAMTSL3P82987 1691 aa20.1■□□□□ 0.81
RNF4-216ENST00000511859 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
RNF4-216ENST00000511859 RAPGEF3O95398 923 aa20.03■□□□□ 0.8
RNF4-216ENST00000511859 PCF11O94913 1555 aaKnown RBP20.01■□□□□ 0.79
RNF4-216ENST00000511859 ARID4BQ4LE39 1312 aaPredicted RBP20■□□□□ 0.79
RNF4-216ENST00000511859 ATP10BO94823 1461 aa20■□□□□ 0.79
RNF4-216ENST00000511859 BCORL1Q5H9F3 1711 aa19.99■□□□□ 0.79
RNF4-216ENST00000511859 ABCA9Q8IUA7 1624 aa19.99■□□□□ 0.79
RNF4-216ENST00000511859 NEO1Q92859 1461 aa19.98■□□□□ 0.79
RNF4-216ENST00000511859 LMTK3Q96Q04 1460 aa19.97■□□□□ 0.79
RNF4-216ENST00000511859 ARID3CA6NKF2 412 aa19.96■□□□□ 0.79
RNF4-216ENST00000511859 MADDQ8WXG6 1647 aa19.95■□□□□ 0.78
RNF4-216ENST00000511859 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
RNF4-216ENST00000511859 CERKQ8TCT0 537 aa19.9■□□□□ 0.78
RNF4-216ENST00000511859 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
RNF4-216ENST00000511859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.88■□□□□ 0.77
RNF4-216ENST00000511859 HSPA2P54652 639 aa19.88■□□□□ 0.77
RNF4-216ENST00000511859 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
RNF4-216ENST00000511859 FRMPD1Q5SYB0 1578 aa19.86■□□□□ 0.77
RNF4-216ENST00000511859 RIMS1Q86UR5 1692 aaKnown RBP19.86■□□□□ 0.77
RNF4-216ENST00000511859 POGZQ7Z3K3 1410 aa19.84■□□□□ 0.77
RNF4-216ENST00000511859 DENND4BO75064 1496 aaPredicted RBP19.83■□□□□ 0.77
RNF4-216ENST00000511859 ARHGEF40Q8TER5 1519 aa19.81■□□□□ 0.76
RNF4-216ENST00000511859 FHOD3Q2V2M9 1422 aa19.8■□□□□ 0.76
RNF4-216ENST00000511859 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
RNF4-216ENST00000511859 FANCAO15360 1455 aa19.8■□□□□ 0.76
RNF4-216ENST00000511859 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
RNF4-216ENST00000511859 RICTORQ6R327 1708 aa19.79■□□□□ 0.76
RNF4-216ENST00000511859 PLEKHD1A6NEE1 506 aa19.79■□□□□ 0.76
RNF4-216ENST00000511859 AKNAQ7Z591 1439 aa19.79■□□□□ 0.76
RNF4-216ENST00000511859 SOCS7O14512 581 aa19.76■□□□□ 0.75
RNF4-216ENST00000511859 SAMD9Q5K651 1589 aa19.75■□□□□ 0.75
RNF4-216ENST00000511859 DISP3Q9P2K9 1392 aa19.74■□□□□ 0.75
RNF4-216ENST00000511859 CFAP74Q9C0B2 1584 aa19.73■□□□□ 0.75
RNF4-216ENST00000511859 MAGI2Q86UL8 1455 aa19.73■□□□□ 0.75
RNF4-216ENST00000511859 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
RNF4-216ENST00000511859 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
RNF4-216ENST00000511859 ILDR2Q71H61 639 aa19.72■□□□□ 0.75
RNF4-216ENST00000511859 EFCAB5A4FU69 1503 aa19.71■□□□□ 0.75
RNF4-216ENST00000511859 ZMYM4Q5VZL5 1548 aa19.71■□□□□ 0.75
RNF4-216ENST00000511859 MLECQ14165 292 aa19.7■□□□□ 0.74
RNF4-216ENST00000511859 ZFYVE16Q7Z3T8 1539 aa19.7■□□□□ 0.74
RNF4-216ENST00000511859 YEATS2Q9ULM3 1422 aa19.69■□□□□ 0.74
RNF4-216ENST00000511859 FER1L4A9Z1Z3 1794 aa19.68■□□□□ 0.74
RNF4-216ENST00000511859 SETD1BQ9UPS6 1966 aaKnown RBP19.68■□□□□ 0.74
RNF4-216ENST00000511859 TTC37Q6PGP7 1564 aa19.67■□□□□ 0.74
RNF4-216ENST00000511859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms