RNA–Protein interactions for RNA: ENST00000511503.1

AFDN-220, Transcript of afadin, adherens junction formation factor, humanhuman

TSL 2

Gene AFDN, Length 1,257 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFDN-220ENST00000511503 FANCD2Q9BXW9 1451 aa17.33■□□□□ 0.37
AFDN-220ENST00000511503 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
AFDN-220ENST00000511503 SSUH2Q9Y2M2 353 aa17.27■□□□□ 0.36
AFDN-220ENST00000511503 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
AFDN-220ENST00000511503 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
AFDN-220ENST00000511503 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
AFDN-220ENST00000511503 PROM2Q8N271 834 aa17.07■□□□□ 0.32
AFDN-220ENST00000511503 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
AFDN-220ENST00000511503 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
AFDN-220ENST00000511503 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
AFDN-220ENST00000511503 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
AFDN-220ENST00000511503 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
AFDN-220ENST00000511503 SPDYE1Q8NFV5 336 aaPredicted RBP16.95■□□□□ 0.3
AFDN-220ENST00000511503 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
AFDN-220ENST00000511503 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
AFDN-220ENST00000511503 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
AFDN-220ENST00000511503 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
AFDN-220ENST00000511503 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
AFDN-220ENST00000511503 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
AFDN-220ENST00000511503 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
AFDN-220ENST00000511503 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
AFDN-220ENST00000511503 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
AFDN-220ENST00000511503 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
AFDN-220ENST00000511503 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.28
AFDN-220ENST00000511503 SOGA1O94964 1423 aa16.77■□□□□ 0.27
AFDN-220ENST00000511503 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
AFDN-220ENST00000511503 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
AFDN-220ENST00000511503 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
AFDN-220ENST00000511503 RIMBP3Q9UFD9 1639 aa16.74■□□□□ 0.27
AFDN-220ENST00000511503 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
AFDN-220ENST00000511503 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
AFDN-220ENST00000511503 TDRD9Q8NDG6 1382 aaKnown RBP16.71■□□□□ 0.27
AFDN-220ENST00000511503 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
AFDN-220ENST00000511503 PRR29P0C7W0 189 aa16.7■□□□□ 0.26
AFDN-220ENST00000511503 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
AFDN-220ENST00000511503 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
AFDN-220ENST00000511503 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
AFDN-220ENST00000511503 MAGI1Q96QZ7 1491 aaPredicted RBP16.64■□□□□ 0.25
AFDN-220ENST00000511503 CUX1P39880 1505 aa16.64■□□□□ 0.25
AFDN-220ENST00000511503 GRIN2BQ13224 1484 aa16.63■□□□□ 0.25
AFDN-220ENST00000511503 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
AFDN-220ENST00000511503 POTEHQ6S545 545 aa16.6■□□□□ 0.25
AFDN-220ENST00000511503 ARAP1Q96P48 1450 aa16.59■□□□□ 0.25
AFDN-220ENST00000511503 CHD1O14646 1710 aa16.57■□□□□ 0.24
AFDN-220ENST00000511503 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
AFDN-220ENST00000511503 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
AFDN-220ENST00000511503 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
AFDN-220ENST00000511503 FXR2P51116 673 aaKnown RBP eCLIP16.54■□□□□ 0.24
AFDN-220ENST00000511503 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
AFDN-220ENST00000511503 CLASP1Q7Z460 1538 aa16.54■□□□□ 0.24
AFDN-220ENST00000511503 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
AFDN-220ENST00000511503 VASPP50552 380 aaPredicted RBP16.53■□□□□ 0.24
AFDN-220ENST00000511503 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
AFDN-220ENST00000511503 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
AFDN-220ENST00000511503 MIER1Q8N108 512 aa16.5■□□□□ 0.23
AFDN-220ENST00000511503 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
AFDN-220ENST00000511503 PIP4P2Q8N4L2 257 aa16.48■□□□□ 0.23
AFDN-220ENST00000511503 CREBZFQ9NS37 354 aa16.43■□□□□ 0.22
AFDN-220ENST00000511503 ABCA5Q8WWZ7 1642 aa16.42■□□□□ 0.22
AFDN-220ENST00000511503 PRKAR2AP13861 404 aaKnown RBP16.42■□□□□ 0.22
AFDN-220ENST00000511503 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
AFDN-220ENST00000511503 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
AFDN-220ENST00000511503 NUP160Q12769 1436 aa16.37■□□□□ 0.21
AFDN-220ENST00000511503 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
AFDN-220ENST00000511503 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
AFDN-220ENST00000511503 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
AFDN-220ENST00000511503 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
AFDN-220ENST00000511503 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
AFDN-220ENST00000511503 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
AFDN-220ENST00000511503 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
AFDN-220ENST00000511503 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
AFDN-220ENST00000511503 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
AFDN-220ENST00000511503 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
AFDN-220ENST00000511503 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
AFDN-220ENST00000511503 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
AFDN-220ENST00000511503 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
AFDN-220ENST00000511503 MNX1P50219 401 aaPredicted RBP16.23■□□□□ 0.19
AFDN-220ENST00000511503 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
AFDN-220ENST00000511503 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
AFDN-220ENST00000511503 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
AFDN-220ENST00000511503 IGF1RP08069 1367 aa16.15■□□□□ 0.18
AFDN-220ENST00000511503 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
AFDN-220ENST00000511503 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
AFDN-220ENST00000511503 KIAA0586Q9BVV6 1533 aa16.11■□□□□ 0.17
AFDN-220ENST00000511503 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
AFDN-220ENST00000511503 NUBP1P53384 320 aa16.04■□□□□ 0.16
AFDN-220ENST00000511503 CARMIL1Q5VZK9 1371 aa16.03■□□□□ 0.16
AFDN-220ENST00000511503 ABCC10Q5T3U5 1492 aa16.02■□□□□ 0.15
AFDN-220ENST00000511503 CUL7Q14999 1698 aa16.02■□□□□ 0.15
AFDN-220ENST00000511503 MAPKBP1O60336 1514 aa16.01■□□□□ 0.15
AFDN-220ENST00000511503 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
AFDN-220ENST00000511503 HAX1O00165 279 aa15.99■□□□□ 0.15
AFDN-220ENST00000511503 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
AFDN-220ENST00000511503 C19orf67A6NJJ6 358 aa15.98■□□□□ 0.15
AFDN-220ENST00000511503 PTPRGP23470 1445 aa15.98■□□□□ 0.15
AFDN-220ENST00000511503 FAM212AQ96EL1 285 aa15.98■□□□□ 0.15
AFDN-220ENST00000511503 CARMIL2Q6F5E8 1435 aa15.97■□□□□ 0.15
AFDN-220ENST00000511503 CD44P16070 742 aaKnown RBP15.96■□□□□ 0.15
AFDN-220ENST00000511503 RASEFQ8IZ41 740 aa15.96■□□□□ 0.15
AFDN-220ENST00000511503 TNIKQ9UKE5 1360 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms