RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 URB2Q14146 1524 aaKnown RBP13.43□□□□□ -0.26
CLCN3-207ENST00000511092 EIF4G3O43432 1585 aaKnown RBP13.42□□□□□ -0.26
CLCN3-207ENST00000511092 ZBTB22O15209 634 aa13.42□□□□□ -0.26
CLCN3-207ENST00000511092 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
CLCN3-207ENST00000511092 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
CLCN3-207ENST00000511092 KDM6BO15054 1643 aa13.38□□□□□ -0.27
CLCN3-207ENST00000511092 ABCB7O75027 752 aa13.37□□□□□ -0.27
CLCN3-207ENST00000511092 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
CLCN3-207ENST00000511092 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
CLCN3-207ENST00000511092 FBLN2P98095 1184 aa13.27□□□□□ -0.29
CLCN3-207ENST00000511092 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
CLCN3-207ENST00000511092 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
CLCN3-207ENST00000511092 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
CLCN3-207ENST00000511092 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
CLCN3-207ENST00000511092 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
CLCN3-207ENST00000511092 POLA2Q14181 598 aa13.2□□□□□ -0.3
CLCN3-207ENST00000511092 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
CLCN3-207ENST00000511092 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
CLCN3-207ENST00000511092 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLCN3-207ENST00000511092 SYNJ1O43426 1573 aa13.14□□□□□ -0.31
CLCN3-207ENST00000511092 DIP2BQ9P265 1576 aa13.11□□□□□ -0.31
CLCN3-207ENST00000511092 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
CLCN3-207ENST00000511092 ABCC10Q5T3U5 1492 aa13.05□□□□□ -0.32
CLCN3-207ENST00000511092 FAM69CQ0P6D2 419 aa13.05□□□□□ -0.32
CLCN3-207ENST00000511092 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
CLCN3-207ENST00000511092 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
CLCN3-207ENST00000511092 CERKQ8TCT0 537 aa13□□□□□ -0.33
CLCN3-207ENST00000511092 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
CLCN3-207ENST00000511092 CFTRP13569 1480 aa12.97□□□□□ -0.33
CLCN3-207ENST00000511092 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
CLCN3-207ENST00000511092 PRDM2Q13029 1718 aa12.95□□□□□ -0.34
CLCN3-207ENST00000511092 PPRC1Q5VV67 1664 aaKnown RBP12.93□□□□□ -0.34
CLCN3-207ENST00000511092 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
CLCN3-207ENST00000511092 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
CLCN3-207ENST00000511092 MAPKBP1O60336 1514 aa12.88□□□□□ -0.35
CLCN3-207ENST00000511092 PCF11O94913 1555 aaKnown RBP12.87□□□□□ -0.35
CLCN3-207ENST00000511092 CEP170Q5SW79 1584 aa12.86□□□□□ -0.35
CLCN3-207ENST00000511092 COL17A1Q9UMD9 1497 aaPredicted RBP12.84□□□□□ -0.35
CLCN3-207ENST00000511092 CHMP7Q8WUX9 453 aaPredicted RBP12.83□□□□□ -0.36
CLCN3-207ENST00000511092 POTEHQ6S545 545 aa12.8□□□□□ -0.36
CLCN3-207ENST00000511092 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
CLCN3-207ENST00000511092 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
CLCN3-207ENST00000511092 KIF21BO75037 1637 aa12.77□□□□□ -0.36
CLCN3-207ENST00000511092 TDRD9Q8NDG6 1382 aaKnown RBP12.77□□□□□ -0.37
CLCN3-207ENST00000511092 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.37
CLCN3-207ENST00000511092 MED1Q15648 1581 aaPredicted RBP12.76□□□□□ -0.37
CLCN3-207ENST00000511092 WIZO95785 1651 aa12.75□□□□□ -0.37
CLCN3-207ENST00000511092 RAD54L2Q9Y4B4 1467 aa12.75□□□□□ -0.37
CLCN3-207ENST00000511092 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
CLCN3-207ENST00000511092 ADCY10Q96PN6 1610 aa12.74□□□□□ -0.37
CLCN3-207ENST00000511092 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
CLCN3-207ENST00000511092 PTPRMP28827 1452 aa12.72□□□□□ -0.37
CLCN3-207ENST00000511092 PBRM1Q86U86 1689 aa12.71□□□□□ -0.37
CLCN3-207ENST00000511092 HSPA2P54652 639 aa12.7□□□□□ -0.38
CLCN3-207ENST00000511092 ADAMTSL3P82987 1691 aa12.67□□□□□ -0.38
CLCN3-207ENST00000511092 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
CLCN3-207ENST00000511092 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
CLCN3-207ENST00000511092 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
CLCN3-207ENST00000511092 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
CLCN3-207ENST00000511092 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
CLCN3-207ENST00000511092 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
CLCN3-207ENST00000511092 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
CLCN3-207ENST00000511092 ABCC8Q09428 1581 aa12.61□□□□□ -0.39
CLCN3-207ENST00000511092 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
CLCN3-207ENST00000511092 MADDQ8WXG6 1647 aa12.58□□□□□ -0.4
CLCN3-207ENST00000511092 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLCN3-207ENST00000511092 GLI2P10070 1586 aa12.53□□□□□ -0.4
CLCN3-207ENST00000511092 MAP3K4Q9Y6R4 1608 aa12.53□□□□□ -0.4
CLCN3-207ENST00000511092 SOGA1O94964 1423 aa12.53□□□□□ -0.4
CLCN3-207ENST00000511092 GRIN2AQ12879 1464 aa12.52□□□□□ -0.41
CLCN3-207ENST00000511092 RIMS1Q86UR5 1692 aaKnown RBP12.51□□□□□ -0.41
CLCN3-207ENST00000511092 STRCQ7RTU9 1775 aa12.51□□□□□ -0.41
CLCN3-207ENST00000511092 SSUH2Q9Y2M2 353 aa12.51□□□□□ -0.41
CLCN3-207ENST00000511092 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
CLCN3-207ENST00000511092 NUP160Q12769 1436 aa12.51□□□□□ -0.41
CLCN3-207ENST00000511092 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
CLCN3-207ENST00000511092 BCORL1Q5H9F3 1711 aa12.48□□□□□ -0.41
CLCN3-207ENST00000511092 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
CLCN3-207ENST00000511092 SETD1AO15047 1707 aaKnown RBP12.47□□□□□ -0.41
CLCN3-207ENST00000511092 LTBP4Q8N2S1 1624 aa12.46□□□□□ -0.41
CLCN3-207ENST00000511092 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
CLCN3-207ENST00000511092 FGD5Q6ZNL6 1462 aa12.43□□□□□ -0.42
CLCN3-207ENST00000511092 CUL7Q14999 1698 aa12.42□□□□□ -0.42
CLCN3-207ENST00000511092 ADAMTS12P58397 1594 aa12.41□□□□□ -0.42
CLCN3-207ENST00000511092 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.43
CLCN3-207ENST00000511092 ABCA5Q8WWZ7 1642 aa12.39□□□□□ -0.43
CLCN3-207ENST00000511092 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
CLCN3-207ENST00000511092 IQSEC2Q5JU85 1478 aa12.38□□□□□ -0.43
CLCN3-207ENST00000511092 ASXL2Q76L83 1435 aa12.37□□□□□ -0.43
CLCN3-207ENST00000511092 FXR2P51116 673 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLCN3-207ENST00000511092 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
CLCN3-207ENST00000511092 TOP2AP11388 1531 aaKnown RBP12.34□□□□□ -0.43
CLCN3-207ENST00000511092 CFAP43Q8NDM7 1665 aa12.32□□□□□ -0.44
CLCN3-207ENST00000511092 HSPA1LP34931 641 aa12.32□□□□□ -0.44
CLCN3-207ENST00000511092 IFFO2Q5TF58 517 aa12.32□□□□□ -0.44
CLCN3-207ENST00000511092 EPRSP07814 1512 aaKnown RBP12.32□□□□□ -0.44
CLCN3-207ENST00000511092 ABCC2Q92887 1545 aa12.31□□□□□ -0.44
CLCN3-207ENST00000511092 KIAA0586Q9BVV6 1533 aa12.3□□□□□ -0.44
CLCN3-207ENST00000511092 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
CLCN3-207ENST00000511092 PLB1Q6P1J6 1458 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms