RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 TSPYL2Q9H2G4 693 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P3-201ENST00000510526 ATMINO43313 823 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P3-201ENST00000510526 POTEB2H3BUK9 544 aa7.46□□□□□ -1.22
HMGB3P3-201ENST00000510526 PELP1Q8IZL8 1130 aaKnown RBP7.46□□□□□ -1.22
HMGB3P3-201ENST00000510526 METRNQ9UJH8 293 aa7.46□□□□□ -1.22
HMGB3P3-201ENST00000510526 CCDC61Q9Y6R9 512 aa7.46□□□□□ -1.22
HMGB3P3-201ENST00000510526 MAMSTRQ6ZN01 415 aa7.45□□□□□ -1.22
HMGB3P3-201ENST00000510526 MIER1Q8N108 512 aa7.45□□□□□ -1.22
HMGB3P3-201ENST00000510526 KIF12Q96FN5 646 aa7.42□□□□□ -1.22
HMGB3P3-201ENST00000510526 ZBTB47Q9UFB7 747 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P3-201ENST00000510526 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
HMGB3P3-201ENST00000510526 TIE1P35590 1138 aa7.38□□□□□ -1.23
HMGB3P3-201ENST00000510526 ATN1P54259 1190 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P3-201ENST00000510526 SCUBE2Q9NQ36 999 aa7.38□□□□□ -1.23
HMGB3P3-201ENST00000510526 POTEMA6NI47 508 aa7.37□□□□□ -1.23
HMGB3P3-201ENST00000510526 MAP3K13O43283 966 aa7.36□□□□□ -1.23
HMGB3P3-201ENST00000510526 SGIP1Q9BQI5 828 aa7.36□□□□□ -1.23
HMGB3P3-201ENST00000510526 PCDH10Q9P2E7 1040 aa7.36□□□□□ -1.23
HMGB3P3-201ENST00000510526 POTEGQ6S5H5 508 aa7.35□□□□□ -1.23
HMGB3P3-201ENST00000510526 RASEFQ8IZ41 740 aa7.35□□□□□ -1.23
HMGB3P3-201ENST00000510526 BMP2KQ9NSY1 1161 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P3-201ENST00000510526 POTEJP0CG39 1038 aa7.33□□□□□ -1.24
HMGB3P3-201ENST00000510526 SEC24BO95487 1268 aa7.31□□□□□ -1.24
HMGB3P3-201ENST00000510526 TTLL13PA6NNM8 815 aa7.3□□□□□ -1.24
HMGB3P3-201ENST00000510526 IER5LQ5T953 404 aa7.3□□□□□ -1.24
HMGB3P3-201ENST00000510526 TRPC6Q9Y210 931 aa7.3□□□□□ -1.24
HMGB3P3-201ENST00000510526 PCDHB13Q9Y5F0 798 aa7.3□□□□□ -1.24
HMGB3P3-201ENST00000510526 FAM212AQ96EL1 285 aa7.29□□□□□ -1.24
HMGB3P3-201ENST00000510526 NUBP1P53384 320 aa7.28□□□□□ -1.24
HMGB3P3-201ENST00000510526 POTEFA5A3E0 1075 aa7.27□□□□□ -1.25
HMGB3P3-201ENST00000510526 TRIM35Q9UPQ4 493 aa7.27□□□□□ -1.25
HMGB3P3-201ENST00000510526 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P3-201ENST00000510526 FKBP8Q14318 412 aa7.24□□□□□ -1.25
HMGB3P3-201ENST00000510526 COLQQ9Y215 455 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P3-201ENST00000510526 IFNL1Q8IU54 200 aa7.22□□□□□ -1.25
HMGB3P3-201ENST00000510526 FBXO3Q9UK99 471 aa7.22□□□□□ -1.25
HMGB3P3-201ENST00000510526 TMEM106CQ9BVX2 250 aa7.21□□□□□ -1.26
HMGB3P3-201ENST00000510526 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P3-201ENST00000510526 PLCG2P16885 1265 aa7.19□□□□□ -1.26
HMGB3P3-201ENST00000510526 DCAF8Q5TAQ9 597 aa7.18□□□□□ -1.26
HMGB3P3-201ENST00000510526 SLAIN1Q8ND83 568 aa7.15□□□□□ -1.26
HMGB3P3-201ENST00000510526 IRX5P78411 483 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P3-201ENST00000510526 OCEL1Q9H607 264 aa7.14□□□□□ -1.27
HMGB3P3-201ENST00000510526 PYGBP11216 843 aa7.13□□□□□ -1.27
HMGB3P3-201ENST00000510526 GSE1Q14687 1217 aa7.12□□□□□ -1.27
HMGB3P3-201ENST00000510526 KLHL34Q8N239 644 aa7.11□□□□□ -1.27
HMGB3P3-201ENST00000510526 SNPHO15079 494 aa7.1□□□□□ -1.27
HMGB3P3-201ENST00000510526 ZNF467Q7Z7K2 595 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P3-201ENST00000510526 CDAN1Q8IWY9 1227 aa7.09□□□□□ -1.27
HMGB3P3-201ENST00000510526 ST18O60284 1047 aa7.08□□□□□ -1.28
HMGB3P3-201ENST00000510526 GOLGA2Q08379 1002 aa7.08□□□□□ -1.28
HMGB3P3-201ENST00000510526 TMEM121BQ9BXQ6 578 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P3-201ENST00000510526 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.08□□□□□ -1.28
HMGB3P3-201ENST00000510526 PCDHB8Q9UN66 801 aa7.08□□□□□ -1.28
HMGB3P3-201ENST00000510526 CHRM1P11229 460 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P3-201ENST00000510526 VASPP50552 380 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P3-201ENST00000510526 MKRN3Q13064 507 aaKnown RBP7.05□□□□□ -1.28
HMGB3P3-201ENST00000510526 L3MBTL3Q96JM7 780 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P3-201ENST00000510526 C3orf67Q6ZVT6 689 aa7.02□□□□□ -1.29
HMGB3P3-201ENST00000510526 PSEN1P49768 467 aa7□□□□□ -1.29
HMGB3P3-201ENST00000510526 PDCD7Q8N8D1 485 aaKnown RBP6.99□□□□□ -1.29
HMGB3P3-201ENST00000510526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.99□□□□□ -1.29
HMGB3P3-201ENST00000510526 PDAP1Q13442 181 aaKnown RBP6.98□□□□□ -1.29
HMGB3P3-201ENST00000510526 SPOCK2Q92563 424 aa6.96□□□□□ -1.3
HMGB3P3-201ENST00000510526 G3V3G9 751 aa6.95□□□□□ -1.3
HMGB3P3-201ENST00000510526 ILDR1Q86SU0 546 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P3-201ENST00000510526 MARVELD3Q96A59 401 aa6.93□□□□□ -1.3
HMGB3P3-201ENST00000510526 CIZ1Q9ULV3 898 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P3-201ENST00000510526 EMP3P54852 163 aa6.92□□□□□ -1.3
HMGB3P3-201ENST00000510526 MMRN1Q13201 1228 aa6.92□□□□□ -1.3
HMGB3P3-201ENST00000510526 SPNS2Q8IVW8 549 aa6.92□□□□□ -1.3
HMGB3P3-201ENST00000510526 TRIM41Q8WV44 630 aa6.91□□□□□ -1.3
HMGB3P3-201ENST00000510526 IFNLR1Q8IU57 520 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P3-201ENST00000510526 CABP2Q9NPB3 220 aa6.9□□□□□ -1.3
HMGB3P3-201ENST00000510526 BOLA1Q9Y3E2 137 aa6.88□□□□□ -1.31
HMGB3P3-201ENST00000510526 DPY19L2Q6NUT2 758 aa6.86□□□□□ -1.31
HMGB3P3-201ENST00000510526 HS3ST6Q96QI5 342 aa6.86□□□□□ -1.31
HMGB3P3-201ENST00000510526 FAM205CA6NFA0 338 aa6.85□□□□□ -1.31
HMGB3P3-201ENST00000510526 DOK7Q18PE1 504 aa6.84□□□□□ -1.31
HMGB3P3-201ENST00000510526 ZNF710Q8N1W2 664 aa6.84□□□□□ -1.31
HMGB3P3-201ENST00000510526 RIMBP2O15034 1052 aa6.83□□□□□ -1.32
HMGB3P3-201ENST00000510526 HOXB1P14653 301 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P3-201ENST00000510526 HOXB3P14651 431 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P3-201ENST00000510526 EFCAB3Q8N7B9 438 aa6.8□□□□□ -1.32
HMGB3P3-201ENST00000510526 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
HMGB3P3-201ENST00000510526 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
HMGB3P3-201ENST00000510526 POTEB3A0JP26 581 aa6.79□□□□□ -1.32
HMGB3P3-201ENST00000510526 POTEBQ6S5H4 581 aa6.79□□□□□ -1.32
HMGB3P3-201ENST00000510526 SOX12O15370 315 aa6.78□□□□□ -1.32
HMGB3P3-201ENST00000510526 ERBB3P21860 1342 aa6.77□□□□□ -1.32
HMGB3P3-201ENST00000510526 ZSWIM6Q9HCJ5 1215 aa6.77□□□□□ -1.33
HMGB3P3-201ENST00000510526 RIOK3O14730 519 aaKnown RBP6.75□□□□□ -1.33
HMGB3P3-201ENST00000510526 MICALL2Q8IY33 904 aa6.75□□□□□ -1.33
HMGB3P3-201ENST00000510526 VGFO15240 615 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P3-201ENST00000510526 TAOK2Q9UL54 1235 aa6.74□□□□□ -1.33
HMGB3P3-201ENST00000510526 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P3-201ENST00000510526 ZFP91Q96JP5 570 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P3-201ENST00000510526 VARS2Q5ST30 1063 aaKnown RBP6.7□□□□□ -1.34
HMGB3P3-201ENST00000510526 ZNF687Q8N1G0 1237 aa6.7□□□□□ -1.34
HMGB3P3-201ENST00000510526 PTGER2P43116 358 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms