RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
CAST-229ENST00000510098 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
CAST-229ENST00000510098 NUBP1P53384 320 aa11.1□□□□□ -0.63
CAST-229ENST00000510098 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
CAST-229ENST00000510098 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
CAST-229ENST00000510098 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
CAST-229ENST00000510098 MS4A3Q96HJ5 214 aa11.05□□□□□ -0.64
CAST-229ENST00000510098 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
CAST-229ENST00000510098 LHX8Q68G74 356 aa11.01□□□□□ -0.65
CAST-229ENST00000510098 FAM212AQ96EL1 285 aa11□□□□□ -0.65
CAST-229ENST00000510098 DCAF8Q5TAQ9 597 aa10.99□□□□□ -0.65
CAST-229ENST00000510098 ASTLQ6HA08 431 aaPredicted RBP10.99□□□□□ -0.65
CAST-229ENST00000510098 MAP3K13O43283 966 aa10.97□□□□□ -0.65
CAST-229ENST00000510098 SGIP1Q9BQI5 828 aa10.96□□□□□ -0.65
CAST-229ENST00000510098 ATMINO43313 823 aaPredicted RBP10.95□□□□□ -0.66
CAST-229ENST00000510098 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
CAST-229ENST00000510098 GSE1Q14687 1217 aa10.91□□□□□ -0.66
CAST-229ENST00000510098 CIZ1Q9ULV3 898 aaPredicted RBP10.9□□□□□ -0.66
CAST-229ENST00000510098 TIE1P35590 1138 aa10.89□□□□□ -0.67
CAST-229ENST00000510098 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
CAST-229ENST00000510098 BMP2KQ9NSY1 1161 aaPredicted RBP10.88□□□□□ -0.67
CAST-229ENST00000510098 PYGBP11216 843 aa10.87□□□□□ -0.67
CAST-229ENST00000510098 ATN1P54259 1190 aaPredicted RBP10.86□□□□□ -0.67
CAST-229ENST00000510098 PCDHB13Q9Y5F0 798 aa10.85□□□□□ -0.67
CAST-229ENST00000510098 C7P10643 843 aa10.84□□□□□ -0.67
CAST-229ENST00000510098 SLC39A7Q92504 469 aa10.84□□□□□ -0.67
CAST-229ENST00000510098 POTEB2H3BUK9 544 aa10.84□□□□□ -0.67
CAST-229ENST00000510098 IFNL1Q8IU54 200 aa10.83□□□□□ -0.68
CAST-229ENST00000510098 TTLL13PA6NNM8 815 aa10.82□□□□□ -0.68
CAST-229ENST00000510098 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
CAST-229ENST00000510098 CHRM1P11229 460 aaPredicted RBP10.79□□□□□ -0.68
CAST-229ENST00000510098 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
CAST-229ENST00000510098 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
CAST-229ENST00000510098 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
CAST-229ENST00000510098 POTEJP0CG39 1038 aa10.74□□□□□ -0.69
CAST-229ENST00000510098 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
CAST-229ENST00000510098 IER5LQ5T953 404 aa10.73□□□□□ -0.69
CAST-229ENST00000510098 PKD2Q13563 968 aa10.72□□□□□ -0.69
CAST-229ENST00000510098 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
CAST-229ENST00000510098 TMEM106CQ9BVX2 250 aa10.7□□□□□ -0.7
CAST-229ENST00000510098 ZNF467Q7Z7K2 595 aaPredicted RBP10.69□□□□□ -0.7
CAST-229ENST00000510098 ECM2O94769 699 aaPredicted RBP10.67□□□□□ -0.7
CAST-229ENST00000510098 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
CAST-229ENST00000510098 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
CAST-229ENST00000510098 MAMSTRQ6ZN01 415 aa10.63□□□□□ -0.71
CAST-229ENST00000510098 IRX5P78411 483 aaPredicted RBP10.61□□□□□ -0.71
CAST-229ENST00000510098 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
CAST-229ENST00000510098 PSEN1P49768 467 aa10.6□□□□□ -0.71
CAST-229ENST00000510098 PDAP1Q13442 181 aaKnown RBP10.6□□□□□ -0.71
CAST-229ENST00000510098 RGL2O15211 777 aa10.58□□□□□ -0.71
CAST-229ENST00000510098 SEC24BO95487 1268 aa10.58□□□□□ -0.71
CAST-229ENST00000510098 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
CAST-229ENST00000510098 OCEL1Q9H607 264 aa10.55□□□□□ -0.72
CAST-229ENST00000510098 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
CAST-229ENST00000510098 PLCG2P16885 1265 aa10.53□□□□□ -0.72
CAST-229ENST00000510098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.73
CAST-229ENST00000510098 ILDR1Q86SU0 546 aaPredicted RBP10.52□□□□□ -0.73
CAST-229ENST00000510098 ZFP91Q96JP5 570 aaPredicted RBP10.52□□□□□ -0.73
CAST-229ENST00000510098 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
CAST-229ENST00000510098 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
CAST-229ENST00000510098 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
CAST-229ENST00000510098 CABP2Q9NPB3 220 aa10.49□□□□□ -0.73
CAST-229ENST00000510098 TAOK2Q9UL54 1235 aa10.48□□□□□ -0.73
CAST-229ENST00000510098 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
CAST-229ENST00000510098 MKRN3Q13064 507 aaKnown RBP10.45□□□□□ -0.74
CAST-229ENST00000510098 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
CAST-229ENST00000510098 STK25O00506 426 aa10.43□□□□□ -0.74
CAST-229ENST00000510098 STK24Q9Y6E0 443 aa10.42□□□□□ -0.74
CAST-229ENST00000510098 LCE2DQ5TA82 110 aaPredicted RBP10.41□□□□□ -0.74
CAST-229ENST00000510098 EFCAB3Q8N7B9 438 aa10.41□□□□□ -0.74
CAST-229ENST00000510098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.741e-7■■□□□ 13.9
CAST-229ENST00000510098 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
CAST-229ENST00000510098 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
CAST-229ENST00000510098 L3MBTL3Q96JM7 780 aaPredicted RBP10.36□□□□□ -0.75
CAST-229ENST00000510098 SLAIN1Q8ND83 568 aa10.35□□□□□ -0.75
CAST-229ENST00000510098 HS6ST3Q8IZP7 471 aa10.34□□□□□ -0.75
CAST-229ENST00000510098 POTEMA6NI47 508 aa10.33□□□□□ -0.76
CAST-229ENST00000510098 SOX12O15370 315 aa10.33□□□□□ -0.76
CAST-229ENST00000510098 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
CAST-229ENST00000510098 POTEGQ6S5H5 508 aa10.32□□□□□ -0.76
CAST-229ENST00000510098 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.32□□□□□ -0.76
CAST-229ENST00000510098 PHF8Q9UPP1 1060 aa10.32□□□□□ -0.76
CAST-229ENST00000510098 FAM163AQ96GL9 167 aaPredicted RBP10.31□□□□□ -0.76
CAST-229ENST00000510098 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
CAST-229ENST00000510098 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
CAST-229ENST00000510098 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
CAST-229ENST00000510098 NLRP6P59044 892 aa10.26□□□□□ -0.77
CAST-229ENST00000510098 C3orf67Q6ZVT6 689 aa10.26□□□□□ -0.77
CAST-229ENST00000510098 FBXO22Q8NEZ5 403 aa10.26□□□□□ -0.77
CAST-229ENST00000510098 BOLA1Q9Y3E2 137 aa10.26□□□□□ -0.77
CAST-229ENST00000510098 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
CAST-229ENST00000510098 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
CAST-229ENST00000510098 SNPHO15079 494 aa10.22□□□□□ -0.77
CAST-229ENST00000510098 ST18O60284 1047 aa10.22□□□□□ -0.77
CAST-229ENST00000510098 DNAJC5Q9H3Z4 198 aa10.22□□□□□ -0.77
CAST-229ENST00000510098 G3V3G9 751 aa10.17□□□□□ -0.78
CAST-229ENST00000510098 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
CAST-229ENST00000510098 PPP1R37O75864 691 aa10.14□□□□□ -0.79
CAST-229ENST00000510098 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
CAST-229ENST00000510098 HOXB3P14651 431 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 235.6 ms