RNA–Protein interactions for RNA: ENST00000509982.5

CDK11A-223, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 2,306 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-223ENST00000509982 P3H3Q8IVL6 736 aa27.36■■□□□ 1.97
CDK11A-223ENST00000509982 MIER1Q8N108 512 aa27.34■■□□□ 1.97
CDK11A-223ENST00000509982 PCF11O94913 1555 aaKnown RBP27.34■■□□□ 1.97
CDK11A-223ENST00000509982 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
CDK11A-223ENST00000509982 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
CDK11A-223ENST00000509982 FHOD3Q2V2M9 1422 aa27.3■■□□□ 1.96
CDK11A-223ENST00000509982 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
CDK11A-223ENST00000509982 PHLDB1Q86UU1 1377 aa27.29■■□□□ 1.96
CDK11A-223ENST00000509982 CUL7Q14999 1698 aa27.29■■□□□ 1.96
CDK11A-223ENST00000509982 CFAP43Q8NDM7 1665 aa27.29■■□□□ 1.96
CDK11A-223ENST00000509982 WDR97A6NE52 1622 aa27.24■■□□□ 1.95
CDK11A-223ENST00000509982 GTF3C3Q9Y5Q9 886 aa27.24■■□□□ 1.95
CDK11A-223ENST00000509982 RAB3GAP2Q9H2M9 1393 aa27.24■■□□□ 1.95
CDK11A-223ENST00000509982 EFCAB5A4FU69 1503 aa27.23■■□□□ 1.95
CDK11A-223ENST00000509982 CTTNBP2Q8WZ74 1663 aa27.22■■□□□ 1.95
CDK11A-223ENST00000509982 YTHDC1Q96MU7 727 aaKnown RBP27.21■■□□□ 1.95
CDK11A-223ENST00000509982 ATP1B4Q9UN42 357 aaPredicted RBP27.21■■□□□ 1.95
CDK11A-223ENST00000509982 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
CDK11A-223ENST00000509982 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
CDK11A-223ENST00000509982 PELP1Q8IZL8 1130 aaKnown RBP27.17■■□□□ 1.94
CDK11A-223ENST00000509982 TDRD9Q8NDG6 1382 aaKnown RBP27.16■■□□□ 1.94
CDK11A-223ENST00000509982 CASKIN1Q8WXD9 1431 aa27.16■■□□□ 1.94
CDK11A-223ENST00000509982 ABCA5Q8WWZ7 1642 aa27.15■■□□□ 1.94
CDK11A-223ENST00000509982 MAPKBP1O60336 1514 aa27.14■■□□□ 1.93
CDK11A-223ENST00000509982 FAM50AQ14320 339 aaKnown RBP27.13■■□□□ 1.93
CDK11A-223ENST00000509982 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.933e-7■■□□□ 13.7
CDK11A-223ENST00000509982 SETD5Q9C0A6 1442 aa27.13■■□□□ 1.93
CDK11A-223ENST00000509982 PDS5BQ9NTI5 1447 aa27.1■■□□□ 1.93
CDK11A-223ENST00000509982 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
CDK11A-223ENST00000509982 SNAPC4Q5SXM2 1469 aa27.05■■□□□ 1.92
CDK11A-223ENST00000509982 FMN1Q68DA7 1419 aa27.05■■□□□ 1.92
CDK11A-223ENST00000509982 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
CDK11A-223ENST00000509982 SAMD9Q5K651 1589 aa27.01■■□□□ 1.91
CDK11A-223ENST00000509982 TARBP1Q13395 1621 aaKnown RBP26.95■■□□□ 1.9
CDK11A-223ENST00000509982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.95■■□□□ 1.9
CDK11A-223ENST00000509982 LRRIQ1Q96JM4 1722 aa26.93■■□□□ 1.9
CDK11A-223ENST00000509982 FGD6Q6ZV73 1430 aa26.92■■□□□ 1.9
CDK11A-223ENST00000509982 MTUS2Q5JR59 1369 aa26.9■■□□□ 1.9
CDK11A-223ENST00000509982 SIN3AQ96ST3 1273 aa26.89■■□□□ 1.9
CDK11A-223ENST00000509982 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
CDK11A-223ENST00000509982 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
CDK11A-223ENST00000509982 NCOA2Q15596 1464 aa26.81■■□□□ 1.88
CDK11A-223ENST00000509982 PTPRKQ15262 1439 aa26.8■■□□□ 1.88
CDK11A-223ENST00000509982 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
CDK11A-223ENST00000509982 MYOM3Q5VTT5 1437 aa26.76■■□□□ 1.87
CDK11A-223ENST00000509982 EHBP1L1Q8N3D4 1523 aa26.74■■□□□ 1.87
CDK11A-223ENST00000509982 SUPT6HQ7KZ85 1726 aaKnown RBP26.74■■□□□ 1.87
CDK11A-223ENST00000509982 MAGI3Q5TCQ9 1506 aa26.73■■□□□ 1.87
CDK11A-223ENST00000509982 CCDC18Q5T9S5 1454 aa26.73■■□□□ 1.87
CDK11A-223ENST00000509982 ADAMTS12P58397 1594 aa26.72■■□□□ 1.87
CDK11A-223ENST00000509982 HFM1A2PYH4 1435 aa26.72■■□□□ 1.87
CDK11A-223ENST00000509982 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
CDK11A-223ENST00000509982 PTPN23Q9H3S7 1636 aa26.69■■□□□ 1.86
CDK11A-223ENST00000509982 IQGAP2Q13576 1575 aa26.69■■□□□ 1.86
CDK11A-223ENST00000509982 TIMELESSQ9UNS1 1208 aa26.69■■□□□ 1.86
CDK11A-223ENST00000509982 UGGT2Q9NYU1 1516 aa26.68■■□□□ 1.86
CDK11A-223ENST00000509982 ARHGEF11O15085 1522 aa26.67■■□□□ 1.86
CDK11A-223ENST00000509982 NAIPQ13075 1403 aa26.65■■□□□ 1.86
CDK11A-223ENST00000509982 UACAQ9BZF9 1416 aa26.63■■□□□ 1.85
CDK11A-223ENST00000509982 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
CDK11A-223ENST00000509982 HECW1Q76N89 1606 aa26.63■■□□□ 1.85
CDK11A-223ENST00000509982 EPRSP07814 1512 aaKnown RBP26.6■■□□□ 1.85
CDK11A-223ENST00000509982 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
CDK11A-223ENST00000509982 CDK13Q14004 1512 aaKnown RBP26.57■■□□□ 1.84
CDK11A-223ENST00000509982 DDX10Q13206 875 aaKnown RBP26.55■■□□□ 1.84
CDK11A-223ENST00000509982 KCNH8Q96L42 1107 aa26.55■■□□□ 1.84
CDK11A-223ENST00000509982 WDR62O43379 1518 aa26.55■■□□□ 1.84
CDK11A-223ENST00000509982 TCOF1Q13428 1488 aaKnown RBP26.55■■□□□ 1.84
CDK11A-223ENST00000509982 IFT140Q96RY7 1462 aa26.54■■□□□ 1.84
CDK11A-223ENST00000509982 HIRIP3Q9BW71 556 aaPredicted RBP26.53■■□□□ 1.84
CDK11A-223ENST00000509982 TONSLQ96HA7 1378 aa26.52■■□□□ 1.84
CDK11A-223ENST00000509982 ARID3CA6NKF2 412 aa26.51■■□□□ 1.84
CDK11A-223ENST00000509982 RRP7BPQ9NSQ0 103 aa26.49■■□□□ 1.83
CDK11A-223ENST00000509982 CHIC2Q9UKJ5 165 aa26.49■■□□□ 1.83
CDK11A-223ENST00000509982 GCC2Q8IWJ2 1684 aa26.44■■□□□ 1.82
CDK11A-223ENST00000509982 DISP1Q96F81 1524 aa26.43■■□□□ 1.82
CDK11A-223ENST00000509982 KIAA0586Q9BVV6 1533 aa26.43■■□□□ 1.82
CDK11A-223ENST00000509982 KIAA0556O60303 1618 aa26.42■■□□□ 1.82
CDK11A-223ENST00000509982 MIA2Q96PC5 1412 aa26.42■■□□□ 1.82
CDK11A-223ENST00000509982 KDM6BO15054 1643 aa26.41■■□□□ 1.82
CDK11A-223ENST00000509982 KDM5BQ9UGL1 1544 aa26.41■■□□□ 1.82
CDK11A-223ENST00000509982 DENND4BO75064 1496 aaPredicted RBP26.4■■□□□ 1.82
CDK11A-223ENST00000509982 EIF4G3O43432 1585 aaKnown RBP26.4■■□□□ 1.82
CDK11A-223ENST00000509982 AKNAQ7Z591 1439 aa26.39■■□□□ 1.82
CDK11A-223ENST00000509982 GRIN2AQ12879 1464 aa26.38■■□□□ 1.81
CDK11A-223ENST00000509982 NUP153P49790 1475 aaKnown RBP26.35■■□□□ 1.81
CDK11A-223ENST00000509982 SUPT16HQ9Y5B9 1047 aaKnown RBP26.33■■□□□ 1.81
CDK11A-223ENST00000509982 TRIM52Q96A61 297 aa26.32■■□□□ 1.8
CDK11A-223ENST00000509982 RAPGEF6Q8TEU7 1601 aa26.3■■□□□ 1.8
CDK11A-223ENST00000509982 DAPK1P53355 1430 aa26.27■■□□□ 1.8
CDK11A-223ENST00000509982 ERCC6Q03468 1493 aa26.26■■□□□ 1.79
CDK11A-223ENST00000509982 MPHOSPH9Q99550 1183 aa26.25■■□□□ 1.79
CDK11A-223ENST00000509982 ZNF644Q9H582 1327 aaPredicted RBP26.25■■□□□ 1.79
CDK11A-223ENST00000509982 ABCC5O15440 1437 aa26.23■■□□□ 1.79
CDK11A-223ENST00000509982 ANP32CO43423 234 aa26.23■■□□□ 1.79
CDK11A-223ENST00000509982 MAGI1Q96QZ7 1491 aaPredicted RBP26.22■■□□□ 1.79
CDK11A-223ENST00000509982 CEP170Q5SW79 1584 aa26.22■■□□□ 1.79
CDK11A-223ENST00000509982 DNMT1P26358 1616 aaKnown RBP26.22■■□□□ 1.79
CDK11A-223ENST00000509982 CCER2I3L3R5 266 aa26.21■■□□□ 1.79
CDK11A-223ENST00000509982 ROCK1Q13464 1354 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms