RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ADCY10Q96PN6 1610 aa23.84■■□□□ 1.41
DDX41-210ENST00000509576 IGF1RP08069 1367 aa23.83■■□□□ 1.41
DDX41-210ENST00000509576 CUL7Q14999 1698 aa23.79■■□□□ 1.4
DDX41-210ENST00000509576 KIAA0586Q9BVV6 1533 aa23.76■■□□□ 1.39
DDX41-210ENST00000509576 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
DDX41-210ENST00000509576 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
DDX41-210ENST00000509576 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
DDX41-210ENST00000509576 ABCC10Q5T3U5 1492 aa23.72■■□□□ 1.39
DDX41-210ENST00000509576 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
DDX41-210ENST00000509576 AEBP2Q6ZN18 517 aaPredicted RBP23.62■■□□□ 1.37
DDX41-210ENST00000509576 FAM69CQ0P6D2 419 aa23.61■■□□□ 1.37
DDX41-210ENST00000509576 CARMIL1Q5VZK9 1371 aa23.61■■□□□ 1.37
DDX41-210ENST00000509576 IQGAP2Q13576 1575 aa23.56■■□□□ 1.36
DDX41-210ENST00000509576 PPRC1Q5VV67 1664 aaKnown RBP23.53■■□□□ 1.36
DDX41-210ENST00000509576 DISP1Q96F81 1524 aa23.52■■□□□ 1.36
DDX41-210ENST00000509576 PTPRGP23470 1445 aa23.51■■□□□ 1.35
DDX41-210ENST00000509576 KDM6BO15054 1643 aa23.49■■□□□ 1.35
DDX41-210ENST00000509576 NPM1P06748 294 aaKnown RBP eCLIP23.49■■□□□ 1.35
DDX41-210ENST00000509576 ABCC2Q92887 1545 aa23.47■■□□□ 1.35
DDX41-210ENST00000509576 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
DDX41-210ENST00000509576 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
DDX41-210ENST00000509576 UGGT2Q9NYU1 1516 aa23.43■■□□□ 1.34
DDX41-210ENST00000509576 UHRF1BP1LA0JNW5 1464 aa23.42■■□□□ 1.34
DDX41-210ENST00000509576 CARMIL2Q6F5E8 1435 aa23.41■■□□□ 1.34
DDX41-210ENST00000509576 ASXL2Q76L83 1435 aa23.41■■□□□ 1.34
DDX41-210ENST00000509576 KIAA0556O60303 1618 aa23.4■■□□□ 1.34
DDX41-210ENST00000509576 RAPGEF2Q9Y4G8 1499 aa23.39■■□□□ 1.34
DDX41-210ENST00000509576 GLI2P10070 1586 aa23.39■■□□□ 1.33
DDX41-210ENST00000509576 ZCCHC11Q5TAX3 1644 aaKnown RBP23.37■■□□□ 1.33
DDX41-210ENST00000509576 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
DDX41-210ENST00000509576 CTTNBP2Q8WZ74 1663 aa23.35■■□□□ 1.33
DDX41-210ENST00000509576 KDM4FA0A1W2PPD8 638 aa23.35■■□□□ 1.33
DDX41-210ENST00000509576 KDM5BQ9UGL1 1544 aa23.34■■□□□ 1.33
DDX41-210ENST00000509576 MAP3K4Q9Y6R4 1608 aa23.33■■□□□ 1.32
DDX41-210ENST00000509576 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
DDX41-210ENST00000509576 COL17A1Q9UMD9 1497 aaPredicted RBP23.31■■□□□ 1.32
DDX41-210ENST00000509576 EPRSP07814 1512 aaKnown RBP23.29■■□□□ 1.32
DDX41-210ENST00000509576 ABCA8O94911 1581 aa23.2■■□□□ 1.3
DDX41-210ENST00000509576 PRXQ9BXM0 1461 aa23.2■■□□□ 1.3
DDX41-210ENST00000509576 WDR7Q9Y4E6 1490 aa23.15■■□□□ 1.3
DDX41-210ENST00000509576 ADGRL1O94910 1474 aa23.11■■□□□ 1.29
DDX41-210ENST00000509576 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
DDX41-210ENST00000509576 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
DDX41-210ENST00000509576 TEX14Q8IWB6 1497 aa23.06■■□□□ 1.28
DDX41-210ENST00000509576 MAGI3Q5TCQ9 1506 aa23.02■■□□□ 1.28
DDX41-210ENST00000509576 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
DDX41-210ENST00000509576 CD109Q6YHK3 1445 aa22.98■■□□□ 1.27
DDX41-210ENST00000509576 ATP10BO94823 1461 aa22.97■■□□□ 1.27
DDX41-210ENST00000509576 KCNH8Q96L42 1107 aa22.94■■□□□ 1.26
DDX41-210ENST00000509576 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
DDX41-210ENST00000509576 KIF21BO75037 1637 aa22.93■■□□□ 1.26
DDX41-210ENST00000509576 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
DDX41-210ENST00000509576 ABCA9Q8IUA7 1624 aa22.9■■□□□ 1.26
DDX41-210ENST00000509576 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
DDX41-210ENST00000509576 HECW2Q9P2P5 1572 aa22.88■■□□□ 1.25
DDX41-210ENST00000509576 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
DDX41-210ENST00000509576 ARAP3Q8WWN8 1544 aa22.85■■□□□ 1.25
DDX41-210ENST00000509576 NUP153P49790 1475 aaKnown RBP22.83■■□□□ 1.25
DDX41-210ENST00000509576 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
DDX41-210ENST00000509576 FHOD3Q2V2M9 1422 aa22.78■■□□□ 1.24
DDX41-210ENST00000509576 ADAMTSL3P82987 1691 aa22.74■■□□□ 1.23
DDX41-210ENST00000509576 ILDR1Q86SU0 546 aaPredicted RBP22.71■■□□□ 1.23
DDX41-210ENST00000509576 RICTORQ6R327 1708 aa22.69■■□□□ 1.22
DDX41-210ENST00000509576 EEA1Q15075 1411 aa22.69■■□□□ 1.22
DDX41-210ENST00000509576 RAPGEF3O95398 923 aa22.69■■□□□ 1.22
DDX41-210ENST00000509576 NEO1Q92859 1461 aa22.68■■□□□ 1.22
DDX41-210ENST00000509576 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
DDX41-210ENST00000509576 SIGLEC1Q9BZZ2 1709 aa22.68■■□□□ 1.22
DDX41-210ENST00000509576 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
DDX41-210ENST00000509576 TTC37Q6PGP7 1564 aa22.66■■□□□ 1.22
DDX41-210ENST00000509576 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
DDX41-210ENST00000509576 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.65■■□□□ 1.22
DDX41-210ENST00000509576 MADDQ8WXG6 1647 aa22.62■■□□□ 1.21
DDX41-210ENST00000509576 PHLDB1Q86UU1 1377 aa22.62■■□□□ 1.21
DDX41-210ENST00000509576 EFCAB5A4FU69 1503 aa22.62■■□□□ 1.21
DDX41-210ENST00000509576 CDK13Q14004 1512 aaKnown RBP22.62■■□□□ 1.21
DDX41-210ENST00000509576 PTPRMP28827 1452 aa22.6■■□□□ 1.21
DDX41-210ENST00000509576 ARHGEF40Q8TER5 1519 aa22.59■■□□□ 1.21
DDX41-210ENST00000509576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.58■■□□□ 1.21
DDX41-210ENST00000509576 HNRNPUL2Q1KMD3 747 aaKnown RBP22.58■■□□□ 1.21
DDX41-210ENST00000509576 LRRIQ1Q96JM4 1722 aa22.56■■□□□ 1.2
DDX41-210ENST00000509576 FANCAO15360 1455 aa22.54■■□□□ 1.2
DDX41-210ENST00000509576 AKNAQ7Z591 1439 aa22.53■■□□□ 1.2
DDX41-210ENST00000509576 RIMS1Q86UR5 1692 aaKnown RBP22.52■■□□□ 1.2
DDX41-210ENST00000509576 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.19
DDX41-210ENST00000509576 CFAP74Q9C0B2 1584 aa22.51■■□□□ 1.19
DDX41-210ENST00000509576 DENND4BO75064 1496 aaPredicted RBP22.51■■□□□ 1.19
DDX41-210ENST00000509576 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
DDX41-210ENST00000509576 YEATS2Q9ULM3 1422 aa22.49■■□□□ 1.19
DDX41-210ENST00000509576 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
DDX41-210ENST00000509576 KIF14Q15058 1648 aa22.47■■□□□ 1.19
DDX41-210ENST00000509576 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
DDX41-210ENST00000509576 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
DDX41-210ENST00000509576 LMTK3Q96Q04 1460 aa22.46■■□□□ 1.19
DDX41-210ENST00000509576 MYO5CQ9NQX4 1742 aa22.43■■□□□ 1.18
DDX41-210ENST00000509576 PCF11O94913 1555 aaKnown RBP22.43■■□□□ 1.18
DDX41-210ENST00000509576 ZFYVE16Q7Z3T8 1539 aa22.42■■□□□ 1.18
DDX41-210ENST00000509576 PLCH2O75038 1416 aa22.4■■□□□ 1.18
DDX41-210ENST00000509576 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
DDX41-210ENST00000509576 POGZQ7Z3K3 1410 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms