RNA–Protein interactions for RNA: ENST00000507348.5

SERF1A-205, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-205ENST00000507348 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
SERF1A-205ENST00000507348 CUL7Q14999 1698 aa26.77■■□□□ 1.88
SERF1A-205ENST00000507348 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
SERF1A-205ENST00000507348 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
SERF1A-205ENST00000507348 PRG4Q92954 1404 aaPredicted RBP26.72■■□□□ 1.87
SERF1A-205ENST00000507348 CARMIL1Q5VZK9 1371 aa26.71■■□□□ 1.87
SERF1A-205ENST00000507348 KIAA0586Q9BVV6 1533 aa26.71■■□□□ 1.87
SERF1A-205ENST00000507348 TRHP20396 242 aaPredicted RBP26.58■■□□□ 1.85
SERF1A-205ENST00000507348 RAPGEF2Q9Y4G8 1499 aa26.5■■□□□ 1.83
SERF1A-205ENST00000507348 IQGAP2Q13576 1575 aa26.42■■□□□ 1.82
SERF1A-205ENST00000507348 PRXQ9BXM0 1461 aa26.4■■□□□ 1.82
SERF1A-205ENST00000507348 CARMIL2Q6F5E8 1435 aa26.37■■□□□ 1.81
SERF1A-205ENST00000507348 ADCY10Q96PN6 1610 aa26.36■■□□□ 1.81
SERF1A-205ENST00000507348 TNIKQ9UKE5 1360 aa26.35■■□□□ 1.81
SERF1A-205ENST00000507348 DISP1Q96F81 1524 aa26.35■■□□□ 1.81
SERF1A-205ENST00000507348 UGGT2Q9NYU1 1516 aa26.35■■□□□ 1.81
SERF1A-205ENST00000507348 PTPRGP23470 1445 aa26.35■■□□□ 1.81
SERF1A-205ENST00000507348 MAPKBP1O60336 1514 aa26.32■■□□□ 1.8
SERF1A-205ENST00000507348 NPM1P06748 294 aaKnown RBP eCLIP26.25■■□□□ 1.79
SERF1A-205ENST00000507348 ABCC10Q5T3U5 1492 aa26.24■■□□□ 1.79
SERF1A-205ENST00000507348 UHRF1BP1LA0JNW5 1464 aa26.23■■□□□ 1.79
SERF1A-205ENST00000507348 CSRNP3Q8WYN3 585 aa26.21■■□□□ 1.79
SERF1A-205ENST00000507348 KIF13AQ9H1H9 1805 aa26.2■■□□□ 1.78
SERF1A-205ENST00000507348 ABCC2Q92887 1545 aa26.19■■□□□ 1.78
SERF1A-205ENST00000507348 KIAA0556O60303 1618 aa26.19■■□□□ 1.78
SERF1A-205ENST00000507348 EEA1Q15075 1411 aa26.19■■□□□ 1.78
SERF1A-205ENST00000507348 UACAQ9BZF9 1416 aa26.18■■□□□ 1.78
SERF1A-205ENST00000507348 CTTNBP2Q8WZ74 1663 aa26.16■■□□□ 1.78
SERF1A-205ENST00000507348 DIP2BQ9P265 1576 aa26.13■■□□□ 1.77
SERF1A-205ENST00000507348 FAM69CQ0P6D2 419 aa26.12■■□□□ 1.77
SERF1A-205ENST00000507348 GOLGA3Q08378 1498 aa26.11■■□□□ 1.77
SERF1A-205ENST00000507348 KDM5BQ9UGL1 1544 aa26.09■■□□□ 1.77
SERF1A-205ENST00000507348 TTBK1Q5TCY1 1321 aaPredicted RBP26.09■■□□□ 1.77
SERF1A-205ENST00000507348 PLB1Q6P1J6 1458 aa26.04■■□□□ 1.76
SERF1A-205ENST00000507348 ASXL2Q76L83 1435 aa26.04■■□□□ 1.76
SERF1A-205ENST00000507348 ABCA8O94911 1581 aa25.99■■□□□ 1.75
SERF1A-205ENST00000507348 GLI2P10070 1586 aa25.98■■□□□ 1.75
SERF1A-205ENST00000507348 SAMD9Q5K651 1589 aa25.93■■□□□ 1.74
SERF1A-205ENST00000507348 ZCCHC11Q5TAX3 1644 aaKnown RBP25.92■■□□□ 1.74
SERF1A-205ENST00000507348 KIF21BO75037 1637 aa25.92■■□□□ 1.74
SERF1A-205ENST00000507348 EPRSP07814 1512 aaKnown RBP25.9■■□□□ 1.74
SERF1A-205ENST00000507348 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.74
SERF1A-205ENST00000507348 WDR7Q9Y4E6 1490 aa25.85■■□□□ 1.73
SERF1A-205ENST00000507348 P3H3Q8IVL6 736 aa25.82■■□□□ 1.72
SERF1A-205ENST00000507348 PPRC1Q5VV67 1664 aaKnown RBP25.81■■□□□ 1.72
SERF1A-205ENST00000507348 MAP3K4Q9Y6R4 1608 aa25.79■■□□□ 1.72
SERF1A-205ENST00000507348 ATP10BO94823 1461 aa25.77■■□□□ 1.72
SERF1A-205ENST00000507348 TSPOAP1O95153 1857 aa25.77■■□□□ 1.72
SERF1A-205ENST00000507348 KDM6BO15054 1643 aa25.74■■□□□ 1.71
SERF1A-205ENST00000507348 FOXD1Q16676 465 aa25.73■■□□□ 1.71
SERF1A-205ENST00000507348 EFCAB5A4FU69 1503 aa25.73■■□□□ 1.71
SERF1A-205ENST00000507348 FHOD3Q2V2M9 1422 aa25.71■■□□□ 1.71
SERF1A-205ENST00000507348 RAPGEF6Q8TEU7 1601 aa25.69■■□□□ 1.7
SERF1A-205ENST00000507348 NUP153P49790 1475 aaKnown RBP25.68■■□□□ 1.7
SERF1A-205ENST00000507348 TEX14Q8IWB6 1497 aa25.68■■□□□ 1.7
SERF1A-205ENST00000507348 MAGI3Q5TCQ9 1506 aa25.68■■□□□ 1.7
SERF1A-205ENST00000507348 COL17A1Q9UMD9 1497 aaPredicted RBP25.67■■□□□ 1.7
SERF1A-205ENST00000507348 CD109Q6YHK3 1445 aa25.64■■□□□ 1.7
SERF1A-205ENST00000507348 KCNH8Q96L42 1107 aa25.63■■□□□ 1.69
SERF1A-205ENST00000507348 CFAP43Q8NDM7 1665 aa25.62■■□□□ 1.69
SERF1A-205ENST00000507348 RANGAP1P46060 587 aaPredicted RBP25.62■■□□□ 1.69
SERF1A-205ENST00000507348 UBTFP17480 764 aaKnown RBP25.61■■□□□ 1.69
SERF1A-205ENST00000507348 ARID3CA6NKF2 412 aa25.59■■□□□ 1.69
SERF1A-205ENST00000507348 ARHGAP35Q9NRY4 1499 aa25.56■■□□□ 1.68
SERF1A-205ENST00000507348 ABCA9Q8IUA7 1624 aa25.54■■□□□ 1.68
SERF1A-205ENST00000507348 FMN1Q68DA7 1419 aa25.49■■□□□ 1.67
SERF1A-205ENST00000507348 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
SERF1A-205ENST00000507348 ARAP3Q8WWN8 1544 aa25.47■■□□□ 1.67
SERF1A-205ENST00000507348 PHLDB1Q86UU1 1377 aa25.46■■□□□ 1.67
SERF1A-205ENST00000507348 KDM4FA0A1W2PPD8 638 aa25.45■■□□□ 1.66
SERF1A-205ENST00000507348 PLEKHD1A6NEE1 506 aa25.45■■□□□ 1.66
SERF1A-205ENST00000507348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.66
SERF1A-205ENST00000507348 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
SERF1A-205ENST00000507348 NEO1Q92859 1461 aa25.4■■□□□ 1.66
SERF1A-205ENST00000507348 CDK13Q14004 1512 aaKnown RBP25.38■■□□□ 1.65
SERF1A-205ENST00000507348 HECW1Q76N89 1606 aa25.35■■□□□ 1.65
SERF1A-205ENST00000507348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.35■■□□□ 1.65
SERF1A-205ENST00000507348 CASKIN1Q8WXD9 1431 aa25.29■■□□□ 1.64
SERF1A-205ENST00000507348 TTC37Q6PGP7 1564 aa25.27■■□□□ 1.64
SERF1A-205ENST00000507348 ADGRL1O94910 1474 aa25.26■■□□□ 1.63
SERF1A-205ENST00000507348 CDK11AQ9UQ88 783 aaPredicted RBP25.25■■□□□ 1.63
SERF1A-205ENST00000507348 PLCH2O75038 1416 aa25.24■■□□□ 1.63
SERF1A-205ENST00000507348 CLIP1P30622 1438 aa25.24■■□□□ 1.63
SERF1A-205ENST00000507348 RAPGEF3O95398 923 aa25.24■■□□□ 1.63
SERF1A-205ENST00000507348 FANCAO15360 1455 aa25.23■■□□□ 1.63
SERF1A-205ENST00000507348 TROQ12816 1431 aaPredicted RBP25.23■■□□□ 1.63
SERF1A-205ENST00000507348 AKNAQ7Z591 1439 aa25.23■■□□□ 1.63
SERF1A-205ENST00000507348 FRMPD1Q5SYB0 1578 aa25.22■■□□□ 1.63
SERF1A-205ENST00000507348 LRRIQ1Q96JM4 1722 aa25.21■■□□□ 1.63
SERF1A-205ENST00000507348 ATP1B4Q9UN42 357 aaPredicted RBP25.21■■□□□ 1.63
SERF1A-205ENST00000507348 PCF11O94913 1555 aaKnown RBP25.18■■□□□ 1.62
SERF1A-205ENST00000507348 CCDC18Q5T9S5 1454 aa25.18■■□□□ 1.62
SERF1A-205ENST00000507348 CFAP74Q9C0B2 1584 aa25.18■■□□□ 1.62
SERF1A-205ENST00000507348 DENND4BO75064 1496 aaPredicted RBP25.17■■□□□ 1.62
SERF1A-205ENST00000507348 FYCO1Q9BQS8 1478 aa25.17■■□□□ 1.62
SERF1A-205ENST00000507348 KIF14Q15058 1648 aa25.14■■□□□ 1.61
SERF1A-205ENST00000507348 RICTORQ6R327 1708 aa25.12■■□□□ 1.61
SERF1A-205ENST00000507348 ZMYM4Q5VZL5 1548 aa25.1■■□□□ 1.61
SERF1A-205ENST00000507348 EFCAB2Q5VUJ9 269 aa25.09■■□□□ 1.61
SERF1A-205ENST00000507348 POGZQ7Z3K3 1410 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms