RNA–Protein interactions for RNA: ENST00000505752.5

ESRRB-202, Transcript of estrogen related receptor beta, humanhuman

TSL 1 (best)

Gene ESRRB, Length 2,432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRB-202ENST00000505752 WDR62O43379 1518 aa19.06■□□□□ 0.64
ESRRB-202ENST00000505752 CUL7Q14999 1698 aa19.03■□□□□ 0.64
ESRRB-202ENST00000505752 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.64
ESRRB-202ENST00000505752 PRKCSHP14314 528 aaPredicted RBP18.99■□□□□ 0.63
ESRRB-202ENST00000505752 THOC2Q8NI27 1593 aaKnown RBP18.98■□□□□ 0.63
ESRRB-202ENST00000505752 CCER1Q8TC90 406 aaPredicted RBP18.98■□□□□ 0.63
ESRRB-202ENST00000505752 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
ESRRB-202ENST00000505752 AQRO60306 1485 aaKnown RBP eCLIP18.97■□□□□ 0.637e-7■■■■■ 29.1
ESRRB-202ENST00000505752 IFT140Q96RY7 1462 aa18.95■□□□□ 0.62
ESRRB-202ENST00000505752 ARHGAP35Q9NRY4 1499 aa18.95■□□□□ 0.62
ESRRB-202ENST00000505752 CLSPNQ9HAW4 1339 aa18.94■□□□□ 0.62
ESRRB-202ENST00000505752 ZNF608Q9ULD9 1512 aaPredicted RBP18.93■□□□□ 0.62
ESRRB-202ENST00000505752 PBRM1Q86U86 1689 aa18.93■□□□□ 0.62
ESRRB-202ENST00000505752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
ESRRB-202ENST00000505752 APLP2Q06481 763 aa18.88■□□□□ 0.61
ESRRB-202ENST00000505752 CTTNBP2Q8WZ74 1663 aa18.87■□□□□ 0.61
ESRRB-202ENST00000505752 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
ESRRB-202ENST00000505752 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
ESRRB-202ENST00000505752 YTHDC1Q96MU7 727 aaKnown RBP18.84■□□□□ 0.61
ESRRB-202ENST00000505752 EIF4G3O43432 1585 aaKnown RBP18.83■□□□□ 0.6
ESRRB-202ENST00000505752 P3H3Q8IVL6 736 aa18.83■□□□□ 0.6
ESRRB-202ENST00000505752 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.6
ESRRB-202ENST00000505752 ADAMTS12P58397 1594 aa18.83■□□□□ 0.6
ESRRB-202ENST00000505752 ERICH6Q7L0X2 663 aa18.8■□□□□ 0.6
ESRRB-202ENST00000505752 TSHZ2Q9NRE2 1034 aa18.79■□□□□ 0.6
ESRRB-202ENST00000505752 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.6
ESRRB-202ENST00000505752 FHOD3Q2V2M9 1422 aa18.77■□□□□ 0.59
ESRRB-202ENST00000505752 EFCAB5A4FU69 1503 aa18.75■□□□□ 0.59
ESRRB-202ENST00000505752 KANK4Q5T7N3 995 aaPredicted RBP18.72■□□□□ 0.59
ESRRB-202ENST00000505752 SUPT16HQ9Y5B9 1047 aaKnown RBP18.72■□□□□ 0.59
ESRRB-202ENST00000505752 MIER1Q8N108 512 aa18.71■□□□□ 0.59
ESRRB-202ENST00000505752 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
ESRRB-202ENST00000505752 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
ESRRB-202ENST00000505752 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
ESRRB-202ENST00000505752 ATP1B4Q9UN42 357 aaPredicted RBP18.66■□□□□ 0.58
ESRRB-202ENST00000505752 IQGAP2Q13576 1575 aa18.66■□□□□ 0.58
ESRRB-202ENST00000505752 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
ESRRB-202ENST00000505752 FBLN2P98095 1184 aa18.63■□□□□ 0.57
ESRRB-202ENST00000505752 CHMP7Q8WUX9 453 aaPredicted RBP18.63■□□□□ 0.57
ESRRB-202ENST00000505752 TIAM1Q13009 1591 aa18.62■□□□□ 0.57
ESRRB-202ENST00000505752 SYNJ2O15056 1496 aa18.62■□□□□ 0.57
ESRRB-202ENST00000505752 FMN1Q68DA7 1419 aa18.61■□□□□ 0.57
ESRRB-202ENST00000505752 FYCO1Q9BQS8 1478 aa18.59■□□□□ 0.57
ESRRB-202ENST00000505752 CASKIN1Q8WXD9 1431 aa18.59■□□□□ 0.57
ESRRB-202ENST00000505752 MAP3K1Q13233 1512 aa18.58■□□□□ 0.56
ESRRB-202ENST00000505752 KIAA0586Q9BVV6 1533 aa18.58■□□□□ 0.56
ESRRB-202ENST00000505752 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
ESRRB-202ENST00000505752 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
ESRRB-202ENST00000505752 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
ESRRB-202ENST00000505752 LRRC9Q6ZRR7 1453 aa18.54■□□□□ 0.56
ESRRB-202ENST00000505752 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
ESRRB-202ENST00000505752 NUP160Q12769 1436 aa18.48■□□□□ 0.55
ESRRB-202ENST00000505752 DISP1Q96F81 1524 aa18.48■□□□□ 0.55
ESRRB-202ENST00000505752 LRRIQ1Q96JM4 1722 aa18.47■□□□□ 0.55
ESRRB-202ENST00000505752 KIAA0556O60303 1618 aa18.47■□□□□ 0.55
ESRRB-202ENST00000505752 RRBP1Q9P2E9 1410 aaKnown RBP18.46■□□□□ 0.55
ESRRB-202ENST00000505752 PHLDB1Q86UU1 1377 aa18.43■□□□□ 0.54
ESRRB-202ENST00000505752 CCNB3Q8WWL7 1395 aa18.43■□□□□ 0.54
ESRRB-202ENST00000505752 JPH4Q96JJ6 628 aa18.41■□□□□ 0.54
ESRRB-202ENST00000505752 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
ESRRB-202ENST00000505752 HECW1Q76N89 1606 aa18.4■□□□□ 0.54
ESRRB-202ENST00000505752 CHD1O14646 1710 aa18.4■□□□□ 0.54
ESRRB-202ENST00000505752 ARID3CA6NKF2 412 aa18.39■□□□□ 0.53
ESRRB-202ENST00000505752 CCDC18Q5T9S5 1454 aa18.36■□□□□ 0.53
ESRRB-202ENST00000505752 ITGAEP38570 1179 aa18.36■□□□□ 0.53
ESRRB-202ENST00000505752 EPRSP07814 1512 aaKnown RBP18.36■□□□□ 0.53
ESRRB-202ENST00000505752 CDK13Q14004 1512 aaKnown RBP18.35■□□□□ 0.53
ESRRB-202ENST00000505752 CARMIL2Q6F5E8 1435 aa18.35■□□□□ 0.53
ESRRB-202ENST00000505752 MAGI3Q5TCQ9 1506 aa18.33■□□□□ 0.52
ESRRB-202ENST00000505752 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
ESRRB-202ENST00000505752 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
ESRRB-202ENST00000505752 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
ESRRB-202ENST00000505752 RBM19Q9Y4C8 960 aaKnown RBP18.3■□□□□ 0.52
ESRRB-202ENST00000505752 NUP153P49790 1475 aaKnown RBP18.29■□□□□ 0.52
ESRRB-202ENST00000505752 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
ESRRB-202ENST00000505752 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
ESRRB-202ENST00000505752 PLB1Q6P1J6 1458 aa18.29■□□□□ 0.52
ESRRB-202ENST00000505752 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
ESRRB-202ENST00000505752 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
ESRRB-202ENST00000505752 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
ESRRB-202ENST00000505752 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
ESRRB-202ENST00000505752 ARHGEF11O15085 1522 aa18.21■□□□□ 0.51
ESRRB-202ENST00000505752 SHROOM2Q13796 1616 aa18.19■□□□□ 0.5
ESRRB-202ENST00000505752 ABCA8O94911 1581 aa18.17■□□□□ 0.5
ESRRB-202ENST00000505752 PTPRGP23470 1445 aa18.17■□□□□ 0.5
ESRRB-202ENST00000505752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.17■□□□□ 0.59e-7■■■■■ 85.9
ESRRB-202ENST00000505752 CDK11AQ9UQ88 783 aaPredicted RBP18.17■□□□□ 0.5
ESRRB-202ENST00000505752 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
ESRRB-202ENST00000505752 MSH5O43196 834 aa18.15■□□□□ 0.5
ESRRB-202ENST00000505752 CLASP1Q7Z460 1538 aa18.14■□□□□ 0.49
ESRRB-202ENST00000505752 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
ESRRB-202ENST00000505752 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
ESRRB-202ENST00000505752 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
ESRRB-202ENST00000505752 FANCIQ9NVI1 1328 aa18.11■□□□□ 0.49
ESRRB-202ENST00000505752 TROQ12816 1431 aaPredicted RBP18.11■□□□□ 0.49
ESRRB-202ENST00000505752 SETD5Q9C0A6 1442 aa18.1■□□□□ 0.49
ESRRB-202ENST00000505752 ATP10BO94823 1461 aa18.1■□□□□ 0.49
ESRRB-202ENST00000505752 PTPRKQ15262 1439 aa18.08■□□□□ 0.49
ESRRB-202ENST00000505752 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
ESRRB-202ENST00000505752 KIF14Q15058 1648 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms