RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 NUP160Q12769 1436 aa10.55□□□□□ -0.72
GYPB-205ENST00000505583 SHROOM2Q13796 1616 aa10.54□□□□□ -0.72
GYPB-205ENST00000505583 FHAD1B1AJZ9 1412 aa10.51□□□□□ -0.73
GYPB-205ENST00000505583 ERICH3Q5RHP9 1530 aa10.51□□□□□ -0.73
GYPB-205ENST00000505583 POTEDQ86YR6 584 aa10.5□□□□□ -0.73
GYPB-205ENST00000505583 KIF13AQ9H1H9 1805 aa10.46□□□□□ -0.74
GYPB-205ENST00000505583 RUSC2Q8N2Y8 1516 aa10.45□□□□□ -0.74
GYPB-205ENST00000505583 PRG4Q92954 1404 aaPredicted RBP10.45□□□□□ -0.74
GYPB-205ENST00000505583 JPH4Q96JJ6 628 aa10.43□□□□□ -0.74
GYPB-205ENST00000505583 ADCY10Q96PN6 1610 aa10.38□□□□□ -0.75
GYPB-205ENST00000505583 IGF1RP08069 1367 aa10.38□□□□□ -0.75
GYPB-205ENST00000505583 MSH5O43196 834 aa10.37□□□□□ -0.75
GYPB-205ENST00000505583 PIAS4Q8N2W9 510 aaPredicted RBP10.37□□□□□ -0.75
GYPB-205ENST00000505583 CUL7Q14999 1698 aa10.35□□□□□ -0.75
GYPB-205ENST00000505583 KIAA0586Q9BVV6 1533 aa10.35□□□□□ -0.75
GYPB-205ENST00000505583 KIF27Q86VH2 1401 aa10.34□□□□□ -0.75
GYPB-205ENST00000505583 ABCC10Q5T3U5 1492 aa10.34□□□□□ -0.75
GYPB-205ENST00000505583 DIP2BQ9P265 1576 aa10.34□□□□□ -0.75
GYPB-205ENST00000505583 MAPKBP1O60336 1514 aa10.33□□□□□ -0.76
GYPB-205ENST00000505583 FAM69CQ0P6D2 419 aa10.32□□□□□ -0.76
GYPB-205ENST00000505583 TSPOAP1O95153 1857 aa10.3□□□□□ -0.76
GYPB-205ENST00000505583 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
GYPB-205ENST00000505583 CARMIL1Q5VZK9 1371 aa10.28□□□□□ -0.76
GYPB-205ENST00000505583 TTBK1Q5TCY1 1321 aaPredicted RBP10.27□□□□□ -0.77
GYPB-205ENST00000505583 PTPRGP23470 1445 aa10.26□□□□□ -0.77
GYPB-205ENST00000505583 IQGAP2Q13576 1575 aa10.26□□□□□ -0.77
GYPB-205ENST00000505583 KDM6BO15054 1643 aa10.25□□□□□ -0.77
GYPB-205ENST00000505583 DISP1Q96F81 1524 aa10.23□□□□□ -0.77
GYPB-205ENST00000505583 PPRC1Q5VV67 1664 aaKnown RBP10.23□□□□□ -0.77
GYPB-205ENST00000505583 TNIKQ9UKE5 1360 aa10.23□□□□□ -0.77
GYPB-205ENST00000505583 ABCC2Q92887 1545 aa10.23□□□□□ -0.77
GYPB-205ENST00000505583 CARMIL2Q6F5E8 1435 aa10.22□□□□□ -0.77
GYPB-205ENST00000505583 KDM4FA0A1W2PPD8 638 aa10.2□□□□□ -0.78
GYPB-205ENST00000505583 ASXL2Q76L83 1435 aa10.2□□□□□ -0.78
GYPB-205ENST00000505583 UGGT2Q9NYU1 1516 aa10.19□□□□□ -0.78
GYPB-205ENST00000505583 UHRF1BP1LA0JNW5 1464 aa10.19□□□□□ -0.78
GYPB-205ENST00000505583 GLI2P10070 1586 aa10.18□□□□□ -0.78
GYPB-205ENST00000505583 RAPGEF2Q9Y4G8 1499 aa10.18□□□□□ -0.78
GYPB-205ENST00000505583 UACAQ9BZF9 1416 aa10.18□□□□□ -0.78
GYPB-205ENST00000505583 KIAA0556O60303 1618 aa10.18□□□□□ -0.78
GYPB-205ENST00000505583 ZCCHC11Q5TAX3 1644 aaKnown RBP10.17□□□□□ -0.78
GYPB-205ENST00000505583 KDM5BQ9UGL1 1544 aa10.17□□□□□ -0.78
GYPB-205ENST00000505583 PLB1Q6P1J6 1458 aa10.17□□□□□ -0.78
GYPB-205ENST00000505583 MAP3K4Q9Y6R4 1608 aa10.16□□□□□ -0.78
GYPB-205ENST00000505583 COL17A1Q9UMD9 1497 aaPredicted RBP10.16□□□□□ -0.78
GYPB-205ENST00000505583 CTTNBP2Q8WZ74 1663 aa10.15□□□□□ -0.78
GYPB-205ENST00000505583 EPRSP07814 1512 aaKnown RBP10.15□□□□□ -0.78
GYPB-205ENST00000505583 ABCA8O94911 1581 aa10.09□□□□□ -0.79
GYPB-205ENST00000505583 ADGRL1O94910 1474 aa10.09□□□□□ -0.79
GYPB-205ENST00000505583 PRXQ9BXM0 1461 aa10.09□□□□□ -0.79
GYPB-205ENST00000505583 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
GYPB-205ENST00000505583 TEX14Q8IWB6 1497 aa10.06□□□□□ -0.8
GYPB-205ENST00000505583 GOLGA3Q08378 1498 aa10.05□□□□□ -0.8
GYPB-205ENST00000505583 CFAP43Q8NDM7 1665 aa10.05□□□□□ -0.8
GYPB-205ENST00000505583 KCNH8Q96L42 1107 aa10.04□□□□□ -0.8
GYPB-205ENST00000505583 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
GYPB-205ENST00000505583 MAGI3Q5TCQ9 1506 aa10.02□□□□□ -0.8
GYPB-205ENST00000505583 CD109Q6YHK3 1445 aa10.02□□□□□ -0.81
GYPB-205ENST00000505583 P3H3Q8IVL6 736 aa10.02□□□□□ -0.81
GYPB-205ENST00000505583 ATP10BO94823 1461 aa10□□□□□ -0.81
GYPB-205ENST00000505583 KCNA4P22459 653 aa10□□□□□ -0.81
GYPB-205ENST00000505583 SAMD9Q5K651 1589 aa10□□□□□ -0.81
GYPB-205ENST00000505583 KIF21BO75037 1637 aa10□□□□□ -0.81
GYPB-205ENST00000505583 HECW2Q9P2P5 1572 aa9.98□□□□□ -0.81
GYPB-205ENST00000505583 ABCA9Q8IUA7 1624 aa9.97□□□□□ -0.81
GYPB-205ENST00000505583 RAPGEF6Q8TEU7 1601 aa9.96□□□□□ -0.81
GYPB-205ENST00000505583 CSRNP3Q8WYN3 585 aa9.96□□□□□ -0.82
GYPB-205ENST00000505583 ARAP3Q8WWN8 1544 aa9.96□□□□□ -0.82
GYPB-205ENST00000505583 ILDR1Q86SU0 546 aaPredicted RBP9.95□□□□□ -0.82
GYPB-205ENST00000505583 NUP153P49790 1475 aaKnown RBP9.94□□□□□ -0.82
GYPB-205ENST00000505583 RANGAP1P46060 587 aaPredicted RBP9.94□□□□□ -0.82
GYPB-205ENST00000505583 FRMPD1Q5SYB0 1578 aa9.92□□□□□ -0.82
GYPB-205ENST00000505583 FHOD3Q2V2M9 1422 aa9.92□□□□□ -0.82
GYPB-205ENST00000505583 PPP4R3CPQ6ZMV5 832 aa9.92□□□□□ -0.82
GYPB-205ENST00000505583 RAPGEF3O95398 923 aa9.91□□□□□ -0.82
GYPB-205ENST00000505583 FAM9AQ8IZU1 332 aaPredicted RBP9.91□□□□□ -0.82
GYPB-205ENST00000505583 ADAMTSL3P82987 1691 aa9.9□□□□□ -0.82
GYPB-205ENST00000505583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.89□□□□□ -0.83
GYPB-205ENST00000505583 HNRNPUL2Q1KMD3 747 aaKnown RBP9.89□□□□□ -0.83
GYPB-205ENST00000505583 NEO1Q92859 1461 aa9.88□□□□□ -0.83
GYPB-205ENST00000505583 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
GYPB-205ENST00000505583 EEA1Q15075 1411 aa9.87□□□□□ -0.83
GYPB-205ENST00000505583 BCORL1Q5H9F3 1711 aa9.87□□□□□ -0.83
GYPB-205ENST00000505583 PHLDB1Q86UU1 1377 aa9.87□□□□□ -0.83
GYPB-205ENST00000505583 PTPRMP28827 1452 aa9.86□□□□□ -0.83
GYPB-205ENST00000505583 TTC37Q6PGP7 1564 aa9.86□□□□□ -0.83
GYPB-205ENST00000505583 SIGLEC1Q9BZZ2 1709 aa9.86□□□□□ -0.83
GYPB-205ENST00000505583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.86□□□□□ -0.83
GYPB-205ENST00000505583 MADDQ8WXG6 1647 aa9.85□□□□□ -0.83
GYPB-205ENST00000505583 CDK13Q14004 1512 aaKnown RBP9.85□□□□□ -0.83
GYPB-205ENST00000505583 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
GYPB-205ENST00000505583 ARHGEF40Q8TER5 1519 aa9.83□□□□□ -0.84
GYPB-205ENST00000505583 PLEKHD1A6NEE1 506 aa9.83□□□□□ -0.84
GYPB-205ENST00000505583 EHMT2Q96KQ7 1210 aa9.83□□□□□ -0.84
GYPB-205ENST00000505583 FANCAO15360 1455 aa9.83□□□□□ -0.84
GYPB-205ENST00000505583 AKNAQ7Z591 1439 aa9.82□□□□□ -0.84
GYPB-205ENST00000505583 RIMS1Q86UR5 1692 aaKnown RBP9.82□□□□□ -0.84
GYPB-205ENST00000505583 CFAP74Q9C0B2 1584 aa9.81□□□□□ -0.84
GYPB-205ENST00000505583 DENND4BO75064 1496 aaPredicted RBP9.81□□□□□ -0.84
GYPB-205ENST00000505583 ARID4BQ4LE39 1312 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms