RNA–Protein interactions for RNA: ENST00000505221.5

PDCD6-202, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-202ENST00000505221 KIAA0586Q9BVV6 1533 aa25.73■■□□□ 1.71
PDCD6-202ENST00000505221 LOC105371045A0A1W2PR82 267 aa25.73■■□□□ 1.71
PDCD6-202ENST00000505221 JPH4Q96JJ6 628 aa25.69■■□□□ 1.7
PDCD6-202ENST00000505221 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
PDCD6-202ENST00000505221 TNIKQ9UKE5 1360 aa25.62■■□□□ 1.69
PDCD6-202ENST00000505221 RANGAP1P46060 587 aaPredicted RBP25.62■■□□□ 1.69
PDCD6-202ENST00000505221 IQGAP2Q13576 1575 aa25.61■■□□□ 1.69
PDCD6-202ENST00000505221 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.68
PDCD6-202ENST00000505221 PRG4Q92954 1404 aaPredicted RBP25.53■■□□□ 1.68
PDCD6-202ENST00000505221 CARMIL2Q6F5E8 1435 aa25.52■■□□□ 1.68
PDCD6-202ENST00000505221 DNAJC5Q9H3Z4 198 aa25.5■■□□□ 1.67
PDCD6-202ENST00000505221 UGGT2Q9NYU1 1516 aa25.48■■□□□ 1.67
PDCD6-202ENST00000505221 SHROOM2Q13796 1616 aa25.46■■□□□ 1.67
PDCD6-202ENST00000505221 P3H3Q8IVL6 736 aa25.45■■□□□ 1.66
PDCD6-202ENST00000505221 CLIP1P30622 1438 aa25.39■■□□□ 1.66
PDCD6-202ENST00000505221 TTBK1Q5TCY1 1321 aaPredicted RBP25.38■■□□□ 1.65
PDCD6-202ENST00000505221 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
PDCD6-202ENST00000505221 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
PDCD6-202ENST00000505221 DISP1Q96F81 1524 aa25.37■■□□□ 1.65
PDCD6-202ENST00000505221 EFCAB5A4FU69 1503 aa25.36■■□□□ 1.65
PDCD6-202ENST00000505221 PTPRGP23470 1445 aa25.33■■□□□ 1.65
PDCD6-202ENST00000505221 ERCC6L2Q5T890 1561 aa25.33■■□□□ 1.65
PDCD6-202ENST00000505221 KIAA0556O60303 1618 aa25.33■■□□□ 1.65
PDCD6-202ENST00000505221 ARHGAP35Q9NRY4 1499 aa25.31■■□□□ 1.64
PDCD6-202ENST00000505221 SAMD9Q5K651 1589 aa25.3■■□□□ 1.64
PDCD6-202ENST00000505221 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
PDCD6-202ENST00000505221 RIMBP3CA6NJZ7 1639 aa25.29■■□□□ 1.64
PDCD6-202ENST00000505221 RIMBP3BA6NNM3 1639 aa25.29■■□□□ 1.64
PDCD6-202ENST00000505221 RIMBP3Q9UFD9 1639 aa25.29■■□□□ 1.64
PDCD6-202ENST00000505221 FHOD3Q2V2M9 1422 aa25.28■■□□□ 1.64
PDCD6-202ENST00000505221 FMN1Q68DA7 1419 aa25.2■■□□□ 1.63
PDCD6-202ENST00000505221 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
PDCD6-202ENST00000505221 ATP1B4Q9UN42 357 aaPredicted RBP25.16■■□□□ 1.62
PDCD6-202ENST00000505221 UACAQ9BZF9 1416 aa25.14■■□□□ 1.62
PDCD6-202ENST00000505221 NPM1P06748 294 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDCD6-202ENST00000505221 PLB1Q6P1J6 1458 aa25.09■■□□□ 1.61
PDCD6-202ENST00000505221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
PDCD6-202ENST00000505221 HNRNPUL2Q1KMD3 747 aaKnown RBP25.04■■□□□ 1.6
PDCD6-202ENST00000505221 VPS8Q8N3P4 1428 aa25.03■■□□□ 1.6
PDCD6-202ENST00000505221 UHRF1BP1LA0JNW5 1464 aa25.03■■□□□ 1.6
PDCD6-202ENST00000505221 ABCA8O94911 1581 aa25.02■■□□□ 1.6
PDCD6-202ENST00000505221 CASKIN1Q8WXD9 1431 aa25.02■■□□□ 1.6
PDCD6-202ENST00000505221 ABCC2Q92887 1545 aa25.02■■□□□ 1.6
PDCD6-202ENST00000505221 RAPGEF6Q8TEU7 1601 aa25.01■■□□□ 1.59
PDCD6-202ENST00000505221 ARID3CA6NKF2 412 aa25■■□□□ 1.59
PDCD6-202ENST00000505221 APLP2Q06481 763 aa24.99■■□□□ 1.59
PDCD6-202ENST00000505221 FYCO1Q9BQS8 1478 aa24.96■■□□□ 1.59
PDCD6-202ENST00000505221 ADCY10Q96PN6 1610 aa24.94■■□□□ 1.58
PDCD6-202ENST00000505221 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
PDCD6-202ENST00000505221 CDK11AQ9UQ88 783 aaPredicted RBP24.93■■□□□ 1.58
PDCD6-202ENST00000505221 NUP153P49790 1475 aaKnown RBP24.93■■□□□ 1.58
PDCD6-202ENST00000505221 PCF11O94913 1555 aaKnown RBP24.92■■□□□ 1.58
PDCD6-202ENST00000505221 ATP10BO94823 1461 aa24.9■■□□□ 1.58
PDCD6-202ENST00000505221 KDM5BQ9UGL1 1544 aa24.9■■□□□ 1.58
PDCD6-202ENST00000505221 PLEKHD1A6NEE1 506 aa24.88■■□□□ 1.57
PDCD6-202ENST00000505221 EPRSP07814 1512 aaKnown RBP24.87■■□□□ 1.57
PDCD6-202ENST00000505221 CCDC18Q5T9S5 1454 aa24.87■■□□□ 1.57
PDCD6-202ENST00000505221 ZCCHC11Q5TAX3 1644 aaKnown RBP24.8■■□□□ 1.56
PDCD6-202ENST00000505221 CDK13Q14004 1512 aaKnown RBP24.8■■□□□ 1.56
PDCD6-202ENST00000505221 KCNH8Q96L42 1107 aa24.77■■□□□ 1.56
PDCD6-202ENST00000505221 ASXL2Q76L83 1435 aa24.77■■□□□ 1.56
PDCD6-202ENST00000505221 MTUS2Q5JR59 1369 aa24.74■■□□□ 1.55
PDCD6-202ENST00000505221 MAP3K1Q13233 1512 aa24.73■■□□□ 1.55
PDCD6-202ENST00000505221 MAPKBP1O60336 1514 aa24.72■■□□□ 1.55
PDCD6-202ENST00000505221 WDR7Q9Y4E6 1490 aa24.7■■□□□ 1.55
PDCD6-202ENST00000505221 TIAM1Q13009 1591 aa24.69■■□□□ 1.54
PDCD6-202ENST00000505221 LRRIQ1Q96JM4 1722 aa24.68■■□□□ 1.54
PDCD6-202ENST00000505221 TROQ12816 1431 aaPredicted RBP24.68■■□□□ 1.54
PDCD6-202ENST00000505221 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
PDCD6-202ENST00000505221 TRHP20396 242 aaPredicted RBP24.66■■□□□ 1.54
PDCD6-202ENST00000505221 FAM69CQ0P6D2 419 aa24.65■■□□□ 1.54
PDCD6-202ENST00000505221 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.53
PDCD6-202ENST00000505221 CFAP43Q8NDM7 1665 aa24.62■■□□□ 1.53
PDCD6-202ENST00000505221 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
PDCD6-202ENST00000505221 ABCC10Q5T3U5 1492 aa24.59■■□□□ 1.53
PDCD6-202ENST00000505221 EHBP1L1Q8N3D4 1523 aa24.59■■□□□ 1.53
PDCD6-202ENST00000505221 MAGI3Q5TCQ9 1506 aa24.58■■□□□ 1.53
PDCD6-202ENST00000505221 KIF14Q15058 1648 aa24.53■■□□□ 1.52
PDCD6-202ENST00000505221 CCNB3Q8WWL7 1395 aa24.51■■□□□ 1.51
PDCD6-202ENST00000505221 GLI2P10070 1586 aa24.5■■□□□ 1.51
PDCD6-202ENST00000505221 CD109Q6YHK3 1445 aa24.49■■□□□ 1.51
PDCD6-202ENST00000505221 DIP2BQ9P265 1576 aa24.49■■□□□ 1.51
PDCD6-202ENST00000505221 SUPT6HQ7KZ85 1726 aaKnown RBP24.47■■□□□ 1.51
PDCD6-202ENST00000505221 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.47■■□□□ 1.512e-6■■■■■ 26.8
PDCD6-202ENST00000505221 NCOA2Q15596 1464 aa24.47■■□□□ 1.51
PDCD6-202ENST00000505221 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
PDCD6-202ENST00000505221 CFDP1Q9UEE9 299 aaPredicted RBP24.43■■□□□ 1.5
PDCD6-202ENST00000505221 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
PDCD6-202ENST00000505221 PLCH2O75038 1416 aa24.41■■□□□ 1.5
PDCD6-202ENST00000505221 TTC37Q6PGP7 1564 aa24.39■■□□□ 1.5
PDCD6-202ENST00000505221 GPATCH8Q9UKJ3 1502 aaKnown RBP24.39■■□□□ 1.49
PDCD6-202ENST00000505221 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
PDCD6-202ENST00000505221 KIF13AQ9H1H9 1805 aa24.36■■□□□ 1.49
PDCD6-202ENST00000505221 MAP3K4Q9Y6R4 1608 aa24.35■■□□□ 1.49
PDCD6-202ENST00000505221 PHLDB1Q86UU1 1377 aa24.35■■□□□ 1.49
PDCD6-202ENST00000505221 MYOM3Q5VTT5 1437 aa24.35■■□□□ 1.49
PDCD6-202ENST00000505221 TEX14Q8IWB6 1497 aa24.34■■□□□ 1.49
PDCD6-202ENST00000505221 ARHGAP5Q13017 1502 aa24.34■■□□□ 1.49
PDCD6-202ENST00000505221 MYO5CQ9NQX4 1742 aa24.32■■□□□ 1.48
PDCD6-202ENST00000505221 FANCAO15360 1455 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms