RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 GRIN2BQ13224 1484 aa11.37□□□□□ -0.59
GYPB-204ENST00000504951 SNAPC4Q5SXM2 1469 aa11.37□□□□□ -0.59
GYPB-204ENST00000504951 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
GYPB-204ENST00000504951 GAPVD1Q14C86 1478 aa11.36□□□□□ -0.59
GYPB-204ENST00000504951 FGD5Q6ZNL6 1462 aa11.3□□□□□ -0.6
GYPB-204ENST00000504951 CUX1P39880 1505 aa11.25□□□□□ -0.61
GYPB-204ENST00000504951 NUP160Q12769 1436 aa11.23□□□□□ -0.61
GYPB-204ENST00000504951 ABCA10Q8WWZ4 1543 aa11.23□□□□□ -0.61
GYPB-204ENST00000504951 GRIN2AQ12879 1464 aa11.19□□□□□ -0.62
GYPB-204ENST00000504951 SHROOM2Q13796 1616 aa11.18□□□□□ -0.62
GYPB-204ENST00000504951 ABCA5Q8WWZ7 1642 aa11.18□□□□□ -0.62
GYPB-204ENST00000504951 CEP170Q5SW79 1584 aa11.18□□□□□ -0.62
GYPB-204ENST00000504951 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
GYPB-204ENST00000504951 ERCC6L2Q5T890 1561 aa11.17□□□□□ -0.62
GYPB-204ENST00000504951 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
GYPB-204ENST00000504951 ABCC10Q5T3U5 1492 aa11.15□□□□□ -0.62
GYPB-204ENST00000504951 KIF13AQ9H1H9 1805 aa11.15□□□□□ -0.62
GYPB-204ENST00000504951 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
GYPB-204ENST00000504951 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
GYPB-204ENST00000504951 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
GYPB-204ENST00000504951 JPH4Q96JJ6 628 aa11.12□□□□□ -0.63
GYPB-204ENST00000504951 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
GYPB-204ENST00000504951 MAPKBP1O60336 1514 aa11.11□□□□□ -0.63
GYPB-204ENST00000504951 FAM69CQ0P6D2 419 aa11.11□□□□□ -0.63
GYPB-204ENST00000504951 ADAMTS12P58397 1594 aa11.1□□□□□ -0.63
GYPB-204ENST00000504951 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
GYPB-204ENST00000504951 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
GYPB-204ENST00000504951 PRG4Q92954 1404 aaPredicted RBP11.09□□□□□ -0.63
GYPB-204ENST00000504951 CAPN15O75808 1086 aa11.08□□□□□ -0.64
GYPB-204ENST00000504951 DIP2BQ9P265 1576 aa11.04□□□□□ -0.64
GYPB-204ENST00000504951 KCNA4P22459 653 aa11.03□□□□□ -0.64
GYPB-204ENST00000504951 DSG3P32926 999 aa11.02□□□□□ -0.65
GYPB-204ENST00000504951 APLP2Q06481 763 aa11.02□□□□□ -0.65
GYPB-204ENST00000504951 SPINK5Q9NQ38 1064 aaPredicted RBP11.01□□□□□ -0.65
GYPB-204ENST00000504951 KDM6BO15054 1643 aa11.01□□□□□ -0.65
GYPB-204ENST00000504951 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
GYPB-204ENST00000504951 BIVM-ERCC5R4GMW8 1640 aa10.98□□□□□ -0.65
GYPB-204ENST00000504951 ADCY10Q96PN6 1610 aa10.97□□□□□ -0.65
GYPB-204ENST00000504951 KIAA0586Q9BVV6 1533 aa10.96□□□□□ -0.65
GYPB-204ENST00000504951 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
GYPB-204ENST00000504951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
GYPB-204ENST00000504951 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
GYPB-204ENST00000504951 GLI2P10070 1586 aa10.94□□□□□ -0.66
GYPB-204ENST00000504951 SLC4A2P04920 1241 aa10.92□□□□□ -0.66
GYPB-204ENST00000504951 PLB1Q6P1J6 1458 aa10.92□□□□□ -0.66
GYPB-204ENST00000504951 ADGRL1O94910 1474 aa10.9□□□□□ -0.66
GYPB-204ENST00000504951 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
GYPB-204ENST00000504951 PTPRGP23470 1445 aa10.9□□□□□ -0.66
GYPB-204ENST00000504951 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
GYPB-204ENST00000504951 UHRF1BP1LA0JNW5 1464 aa10.88□□□□□ -0.67
GYPB-204ENST00000504951 IGF1RP08069 1367 aa10.88□□□□□ -0.67
GYPB-204ENST00000504951 TSPOAP1O95153 1857 aa10.86□□□□□ -0.67
GYPB-204ENST00000504951 TNIKQ9UKE5 1360 aa10.86□□□□□ -0.67
GYPB-204ENST00000504951 COL17A1Q9UMD9 1497 aaPredicted RBP10.86□□□□□ -0.67
GYPB-204ENST00000504951 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
GYPB-204ENST00000504951 FBXO41Q8TF61 875 aa10.85□□□□□ -0.67
GYPB-204ENST00000504951 PPRC1Q5VV67 1664 aaKnown RBP10.85□□□□□ -0.67
GYPB-204ENST00000504951 CARMIL2Q6F5E8 1435 aa10.84□□□□□ -0.67
GYPB-204ENST00000504951 HECW2Q9P2P5 1572 aa10.84□□□□□ -0.67
GYPB-204ENST00000504951 TEX14Q8IWB6 1497 aa10.83□□□□□ -0.68
GYPB-204ENST00000504951 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
GYPB-204ENST00000504951 EPRSP07814 1512 aaKnown RBP10.81□□□□□ -0.68
GYPB-204ENST00000504951 KDM5BQ9UGL1 1544 aa10.81□□□□□ -0.68
GYPB-204ENST00000504951 POTEHQ6S545 545 aa10.81□□□□□ -0.68
GYPB-204ENST00000504951 UACAQ9BZF9 1416 aa10.81□□□□□ -0.68
GYPB-204ENST00000504951 CUL7Q14999 1698 aa10.8□□□□□ -0.68
GYPB-204ENST00000504951 KIF27Q86VH2 1401 aa10.8□□□□□ -0.68
GYPB-204ENST00000504951 MAP3K4Q9Y6R4 1608 aa10.79□□□□□ -0.68
GYPB-204ENST00000504951 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.69
GYPB-204ENST00000504951 MAGI3Q5TCQ9 1506 aa10.75□□□□□ -0.69
GYPB-204ENST00000504951 ABCB7O75027 752 aa10.74□□□□□ -0.69
GYPB-204ENST00000504951 DISP1Q96F81 1524 aa10.73□□□□□ -0.69
GYPB-204ENST00000504951 IQGAP2Q13576 1575 aa10.71□□□□□ -0.69
GYPB-204ENST00000504951 UGGT2Q9NYU1 1516 aa10.71□□□□□ -0.69
GYPB-204ENST00000504951 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
GYPB-204ENST00000504951 PHLDB1Q86UU1 1377 aa10.7□□□□□ -0.7
GYPB-204ENST00000504951 SUPT5HO00267 1087 aaKnown RBP10.69□□□□□ -0.7
GYPB-204ENST00000504951 ARAP3Q8WWN8 1544 aa10.68□□□□□ -0.7
GYPB-204ENST00000504951 CD109Q6YHK3 1445 aa10.68□□□□□ -0.7
GYPB-204ENST00000504951 ZCCHC11Q5TAX3 1644 aaKnown RBP10.67□□□□□ -0.7
GYPB-204ENST00000504951 CFAP43Q8NDM7 1665 aa10.66□□□□□ -0.7
GYPB-204ENST00000504951 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
GYPB-204ENST00000504951 RBM42Q9BTD8 480 aaKnown RBP10.64□□□□□ -0.71
GYPB-204ENST00000504951 TTBK1Q5TCY1 1321 aaPredicted RBP10.63□□□□□ -0.71
GYPB-204ENST00000504951 PTPRMP28827 1452 aa10.63□□□□□ -0.71
GYPB-204ENST00000504951 ADAMTSL3P82987 1691 aa10.62□□□□□ -0.71
GYPB-204ENST00000504951 KIAA0556O60303 1618 aa10.61□□□□□ -0.71
GYPB-204ENST00000504951 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
GYPB-204ENST00000504951 ABCA8O94911 1581 aa10.59□□□□□ -0.71
GYPB-204ENST00000504951 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
GYPB-204ENST00000504951 PCF11O94913 1555 aaKnown RBP10.57□□□□□ -0.72
GYPB-204ENST00000504951 LMTK3Q96Q04 1460 aa10.57□□□□□ -0.72
GYPB-204ENST00000504951 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
GYPB-204ENST00000504951 NEO1Q92859 1461 aa10.56□□□□□ -0.72
GYPB-204ENST00000504951 KIF21BO75037 1637 aa10.56□□□□□ -0.72
GYPB-204ENST00000504951 SOCS7O14512 581 aa10.55□□□□□ -0.72
GYPB-204ENST00000504951 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
GYPB-204ENST00000504951 CERKQ8TCT0 537 aa10.53□□□□□ -0.72
GYPB-204ENST00000504951 BCORL1Q5H9F3 1711 aa10.53□□□□□ -0.72
GYPB-204ENST00000504951 ABCA9Q8IUA7 1624 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms