RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 JPH4Q96JJ6 628 aa22.29■■□□□ 1.16
RNF4-206ENST00000504782 CUL7Q14999 1698 aa22.26■■□□□ 1.15
RNF4-206ENST00000504782 KIAA0586Q9BVV6 1533 aa22.17■■□□□ 1.14
RNF4-206ENST00000504782 CARMIL1Q5VZK9 1371 aa22.16■■□□□ 1.14
RNF4-206ENST00000504782 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.13
RNF4-206ENST00000504782 ADCY10Q96PN6 1610 aa22.07■■□□□ 1.12
RNF4-206ENST00000504782 IQGAP2Q13576 1575 aa22■■□□□ 1.11
RNF4-206ENST00000504782 TTBK1Q5TCY1 1321 aaPredicted RBP21.99■■□□□ 1.11
RNF4-206ENST00000504782 RAPGEF2Q9Y4G8 1499 aa21.97■■□□□ 1.11
RNF4-206ENST00000504782 PTPRGP23470 1445 aa21.94■■□□□ 1.1
RNF4-206ENST00000504782 MAPKBP1O60336 1514 aa21.94■■□□□ 1.1
RNF4-206ENST00000504782 NPM1P06748 294 aaKnown RBP eCLIP21.93■■□□□ 1.1
RNF4-206ENST00000504782 DISP1Q96F81 1524 aa21.92■■□□□ 1.1
RNF4-206ENST00000504782 ABCC10Q5T3U5 1492 aa21.91■■□□□ 1.1
RNF4-206ENST00000504782 CARMIL2Q6F5E8 1435 aa21.9■■□□□ 1.1
RNF4-206ENST00000504782 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
RNF4-206ENST00000504782 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
RNF4-206ENST00000504782 DIP2BQ9P265 1576 aa21.9■■□□□ 1.1
RNF4-206ENST00000504782 UGGT2Q9NYU1 1516 aa21.86■■□□□ 1.09
RNF4-206ENST00000504782 CTTNBP2Q8WZ74 1663 aa21.85■■□□□ 1.09
RNF4-206ENST00000504782 TSPOAP1O95153 1857 aa21.82■■□□□ 1.08
RNF4-206ENST00000504782 KIAA0556O60303 1618 aa21.82■■□□□ 1.08
RNF4-206ENST00000504782 ABCC2Q92887 1545 aa21.8■■□□□ 1.08
RNF4-206ENST00000504782 PRXQ9BXM0 1461 aa21.8■■□□□ 1.08
RNF4-206ENST00000504782 UACAQ9BZF9 1416 aa21.79■■□□□ 1.08
RNF4-206ENST00000504782 UHRF1BP1LA0JNW5 1464 aa21.77■■□□□ 1.08
RNF4-206ENST00000504782 ASXL2Q76L83 1435 aa21.74■■□□□ 1.07
RNF4-206ENST00000504782 ZCCHC11Q5TAX3 1644 aaKnown RBP21.71■■□□□ 1.07
RNF4-206ENST00000504782 KDM5BQ9UGL1 1544 aa21.7■■□□□ 1.06
RNF4-206ENST00000504782 PLB1Q6P1J6 1458 aa21.68■■□□□ 1.06
RNF4-206ENST00000504782 PPRC1Q5VV67 1664 aaKnown RBP21.68■■□□□ 1.06
RNF4-206ENST00000504782 KDM6BO15054 1643 aa21.66■■□□□ 1.06
RNF4-206ENST00000504782 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
RNF4-206ENST00000504782 GLI2P10070 1586 aa21.65■■□□□ 1.06
RNF4-206ENST00000504782 GOLGA3Q08378 1498 aa21.64■■□□□ 1.05
RNF4-206ENST00000504782 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
RNF4-206ENST00000504782 ABCA8O94911 1581 aa21.61■■□□□ 1.05
RNF4-206ENST00000504782 EPRSP07814 1512 aaKnown RBP21.61■■□□□ 1.05
RNF4-206ENST00000504782 P3H3Q8IVL6 736 aa21.6■■□□□ 1.05
RNF4-206ENST00000504782 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.05
RNF4-206ENST00000504782 MAP3K4Q9Y6R4 1608 aa21.58■■□□□ 1.04
RNF4-206ENST00000504782 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
RNF4-206ENST00000504782 WDR7Q9Y4E6 1490 aa21.52■■□□□ 1.04
RNF4-206ENST00000504782 EEA1Q15075 1411 aa21.51■■□□□ 1.03
RNF4-206ENST00000504782 COL17A1Q9UMD9 1497 aaPredicted RBP21.51■■□□□ 1.03
RNF4-206ENST00000504782 ARID3CA6NKF2 412 aa21.5■■□□□ 1.03
RNF4-206ENST00000504782 RANGAP1P46060 587 aaPredicted RBP21.49■■□□□ 1.03
RNF4-206ENST00000504782 KCNH8Q96L42 1107 aa21.47■■□□□ 1.03
RNF4-206ENST00000504782 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
RNF4-206ENST00000504782 ATP10BO94823 1461 aa21.44■■□□□ 1.02
RNF4-206ENST00000504782 KIF21BO75037 1637 aa21.43■■□□□ 1.02
RNF4-206ENST00000504782 KDM4FA0A1W2PPD8 638 aa21.42■■□□□ 1.02
RNF4-206ENST00000504782 CFAP43Q8NDM7 1665 aa21.42■■□□□ 1.02
RNF4-206ENST00000504782 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
RNF4-206ENST00000504782 TEX14Q8IWB6 1497 aa21.41■■□□□ 1.02
RNF4-206ENST00000504782 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
RNF4-206ENST00000504782 FHOD3Q2V2M9 1422 aa21.39■■□□□ 1.02
RNF4-206ENST00000504782 CD109Q6YHK3 1445 aa21.39■■□□□ 1.02
RNF4-206ENST00000504782 MAGI3Q5TCQ9 1506 aa21.35■■□□□ 1.01
RNF4-206ENST00000504782 NUP153P49790 1475 aaKnown RBP21.33■■□□□ 1.01
RNF4-206ENST00000504782 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
RNF4-206ENST00000504782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.28■■□□□ 1
RNF4-206ENST00000504782 HNRNPUL2Q1KMD3 747 aaKnown RBP21.28■■□□□ 1
RNF4-206ENST00000504782 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
RNF4-206ENST00000504782 UBTFP17480 764 aaKnown RBP21.25■□□□□ 0.99
RNF4-206ENST00000504782 ADGRL1O94910 1474 aa21.25■□□□□ 0.99
RNF4-206ENST00000504782 ARAP3Q8WWN8 1544 aa21.19■□□□□ 0.98
RNF4-206ENST00000504782 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
RNF4-206ENST00000504782 CDK13Q14004 1512 aaKnown RBP21.18■□□□□ 0.98
RNF4-206ENST00000504782 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.97
RNF4-206ENST00000504782 RAPGEF3O95398 923 aa21.13■□□□□ 0.97
RNF4-206ENST00000504782 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.13■□□□□ 0.97
RNF4-206ENST00000504782 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
RNF4-206ENST00000504782 FRMPD1Q5SYB0 1578 aa21.1■□□□□ 0.97
RNF4-206ENST00000504782 NEO1Q92859 1461 aa21.1■□□□□ 0.97
RNF4-206ENST00000504782 LRRIQ1Q96JM4 1722 aa21.09■□□□□ 0.97
RNF4-206ENST00000504782 ATP1B4Q9UN42 357 aaPredicted RBP21.09■□□□□ 0.97
RNF4-206ENST00000504782 PHLDB1Q86UU1 1377 aa21.08■□□□□ 0.96
RNF4-206ENST00000504782 HECW1Q76N89 1606 aa21.07■□□□□ 0.96
RNF4-206ENST00000504782 FMN1Q68DA7 1419 aa21.06■□□□□ 0.96
RNF4-206ENST00000504782 RICTORQ6R327 1708 aa21.03■□□□□ 0.96
RNF4-206ENST00000504782 FANCAO15360 1455 aa21.02■□□□□ 0.96
RNF4-206ENST00000504782 AKNAQ7Z591 1439 aa21.02■□□□□ 0.96
RNF4-206ENST00000504782 KIF14Q15058 1648 aa21■□□□□ 0.95
RNF4-206ENST00000504782 CFAP74Q9C0B2 1584 aa20.98■□□□□ 0.95
RNF4-206ENST00000504782 DENND4BO75064 1496 aaPredicted RBP20.97■□□□□ 0.95
RNF4-206ENST00000504782 PCF11O94913 1555 aaKnown RBP20.96■□□□□ 0.95
RNF4-206ENST00000504782 ADAMTSL3P82987 1691 aa20.95■□□□□ 0.94
RNF4-206ENST00000504782 MYO5CQ9NQX4 1742 aa20.95■□□□□ 0.94
RNF4-206ENST00000504782 PLCH2O75038 1416 aa20.95■□□□□ 0.94
RNF4-206ENST00000504782 HECW2Q9P2P5 1572 aa20.93■□□□□ 0.94
RNF4-206ENST00000504782 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
RNF4-206ENST00000504782 ARHGEF40Q8TER5 1519 aa20.92■□□□□ 0.94
RNF4-206ENST00000504782 BCORL1Q5H9F3 1711 aa20.92■□□□□ 0.94
RNF4-206ENST00000504782 TROQ12816 1431 aaPredicted RBP20.91■□□□□ 0.94
RNF4-206ENST00000504782 CASKIN1Q8WXD9 1431 aa20.89■□□□□ 0.94
RNF4-206ENST00000504782 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
RNF4-206ENST00000504782 ZMYM4Q5VZL5 1548 aa20.88■□□□□ 0.93
RNF4-206ENST00000504782 SCAPERQ9BY12 1400 aa20.88■□□□□ 0.93
RNF4-206ENST00000504782 YEATS2Q9ULM3 1422 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms