RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 KIF21BO75037 1637 aa29.84■■■□□ 2.37
DDR1-254ENST00000504679 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
DDR1-254ENST00000504679 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
DDR1-254ENST00000504679 RIMBP3CA6NJZ7 1639 aa29.78■■■□□ 2.36
DDR1-254ENST00000504679 RIMBP3BA6NNM3 1639 aa29.78■■■□□ 2.36
DDR1-254ENST00000504679 SHROOM2Q13796 1616 aa29.78■■■□□ 2.36
DDR1-254ENST00000504679 RIMBP3Q9UFD9 1639 aa29.78■■■□□ 2.36
DDR1-254ENST00000504679 IQGAP2Q13576 1575 aa29.77■■■□□ 2.36
DDR1-254ENST00000504679 UBTFP17480 764 aaKnown RBP29.76■■■□□ 2.35
DDR1-254ENST00000504679 PRG4Q92954 1404 aaPredicted RBP29.76■■■□□ 2.35
DDR1-254ENST00000504679 CTTNBP2Q8WZ74 1663 aa29.74■■■□□ 2.35
DDR1-254ENST00000504679 GOLGA3Q08378 1498 aa29.73■■■□□ 2.35
DDR1-254ENST00000504679 CYB5RLQ6IPT4 315 aa29.67■■■□□ 2.34
DDR1-254ENST00000504679 CARMIL2Q6F5E8 1435 aa29.65■■■□□ 2.34
DDR1-254ENST00000504679 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.34
DDR1-254ENST00000504679 UGGT2Q9NYU1 1516 aa29.62■■■□□ 2.33
DDR1-254ENST00000504679 ARAP1Q96P48 1450 aa29.59■■■□□ 2.33
DDR1-254ENST00000504679 RANGAP1P46060 587 aaPredicted RBP29.56■■■□□ 2.32
DDR1-254ENST00000504679 DISP1Q96F81 1524 aa29.53■■■□□ 2.32
DDR1-254ENST00000504679 TNIKQ9UKE5 1360 aa29.52■■■□□ 2.32
DDR1-254ENST00000504679 TTBK1Q5TCY1 1321 aaPredicted RBP29.48■■■□□ 2.31
DDR1-254ENST00000504679 PTPRGP23470 1445 aa29.48■■■□□ 2.31
DDR1-254ENST00000504679 LOC105371045A0A1W2PR82 267 aa29.46■■■□□ 2.31
DDR1-254ENST00000504679 P3H3Q8IVL6 736 aa29.46■■■□□ 2.31
DDR1-254ENST00000504679 KIAA0556O60303 1618 aa29.45■■■□□ 2.31
DDR1-254ENST00000504679 SAMD9Q5K651 1589 aa29.36■■■□□ 2.29
DDR1-254ENST00000504679 EFCAB5A4FU69 1503 aa29.34■■■□□ 2.29
DDR1-254ENST00000504679 NPM1P06748 294 aaKnown RBP eCLIP29.29■■■□□ 2.28
DDR1-254ENST00000504679 UACAQ9BZF9 1416 aa29.26■■■□□ 2.27
DDR1-254ENST00000504679 FHOD3Q2V2M9 1422 aa29.25■■■□□ 2.27
DDR1-254ENST00000504679 ARHGAP35Q9NRY4 1499 aa29.24■■■□□ 2.27
DDR1-254ENST00000504679 CLIP1P30622 1438 aa29.22■■■□□ 2.27
DDR1-254ENST00000504679 UHRF1BP1LA0JNW5 1464 aa29.19■■■□□ 2.26
DDR1-254ENST00000504679 ADCY10Q96PN6 1610 aa29.18■■■□□ 2.26
DDR1-254ENST00000504679 PLB1Q6P1J6 1458 aa29.17■■■□□ 2.26
DDR1-254ENST00000504679 ABCC2Q92887 1545 aa29.15■■■□□ 2.26
DDR1-254ENST00000504679 CEP162Q5TB80 1403 aa29.14■■■□□ 2.26
DDR1-254ENST00000504679 ABCA8O94911 1581 aa29.13■■■□□ 2.25
DDR1-254ENST00000504679 FMN1Q68DA7 1419 aa29.12■■■□□ 2.25
DDR1-254ENST00000504679 RAPGEF6Q8TEU7 1601 aa29.05■■■□□ 2.24
DDR1-254ENST00000504679 ATP1B4Q9UN42 357 aaPredicted RBP29.05■■■□□ 2.24
DDR1-254ENST00000504679 KDM5BQ9UGL1 1544 aa29.04■■■□□ 2.24
DDR1-254ENST00000504679 ARID3CA6NKF2 412 aa29■■■□□ 2.23
DDR1-254ENST00000504679 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.99■■■□□ 2.23
DDR1-254ENST00000504679 TRHP20396 242 aaPredicted RBP28.99■■■□□ 2.23
DDR1-254ENST00000504679 HNRNPUL2Q1KMD3 747 aaKnown RBP28.99■■■□□ 2.23
DDR1-254ENST00000504679 ATP10BO94823 1461 aa28.96■■■□□ 2.23
DDR1-254ENST00000504679 MAPKBP1O60336 1514 aa28.95■■■□□ 2.23
DDR1-254ENST00000504679 ZCCHC11Q5TAX3 1644 aaKnown RBP28.95■■■□□ 2.23
DDR1-254ENST00000504679 NUP153P49790 1475 aaKnown RBP28.94■■■□□ 2.22
DDR1-254ENST00000504679 CASKIN1Q8WXD9 1431 aa28.91■■■□□ 2.22
DDR1-254ENST00000504679 ASXL2Q76L83 1435 aa28.9■■■□□ 2.22
DDR1-254ENST00000504679 HECW1Q76N89 1606 aa28.88■■■□□ 2.21
DDR1-254ENST00000504679 PLEKHD1A6NEE1 506 aa28.85■■■□□ 2.21
DDR1-254ENST00000504679 FAM69CQ0P6D2 419 aa28.84■■■□□ 2.21
DDR1-254ENST00000504679 EPRSP07814 1512 aaKnown RBP28.83■■■□□ 2.21
DDR1-254ENST00000504679 CDK11AQ9UQ88 783 aaPredicted RBP28.82■■■□□ 2.2
DDR1-254ENST00000504679 FYCO1Q9BQS8 1478 aa28.82■■■□□ 2.2
DDR1-254ENST00000504679 PCF11O94913 1555 aaKnown RBP28.81■■■□□ 2.2
DDR1-254ENST00000504679 ABCC10Q5T3U5 1492 aa28.81■■■□□ 2.2
DDR1-254ENST00000504679 KCNH8Q96L42 1107 aa28.81■■■□□ 2.2
DDR1-254ENST00000504679 WDR7Q9Y4E6 1490 aa28.79■■■□□ 2.2
DDR1-254ENST00000504679 VPS8Q8N3P4 1428 aa28.77■■■□□ 2.2
DDR1-254ENST00000504679 CDK13Q14004 1512 aaKnown RBP28.76■■■□□ 2.19
DDR1-254ENST00000504679 CCDC18Q5T9S5 1454 aa28.75■■■□□ 2.19
DDR1-254ENST00000504679 DIP2BQ9P265 1576 aa28.71■■■□□ 2.19
DDR1-254ENST00000504679 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
DDR1-254ENST00000504679 LRRIQ1Q96JM4 1722 aa28.7■■■□□ 2.19
DDR1-254ENST00000504679 GLI2P10070 1586 aa28.67■■■□□ 2.18
DDR1-254ENST00000504679 APLP2Q06481 763 aa28.62■■■□□ 2.17
DDR1-254ENST00000504679 TROQ12816 1431 aaPredicted RBP28.6■■■□□ 2.17
DDR1-254ENST00000504679 CD109Q6YHK3 1445 aa28.56■■■□□ 2.16
DDR1-254ENST00000504679 MTUS2Q5JR59 1369 aa28.54■■■□□ 2.16
DDR1-254ENST00000504679 TSPOAP1O95153 1857 aa28.53■■■□□ 2.16
DDR1-254ENST00000504679 CFAP43Q8NDM7 1665 aa28.52■■■□□ 2.16
DDR1-254ENST00000504679 MAP3K4Q9Y6R4 1608 aa28.52■■■□□ 2.16
DDR1-254ENST00000504679 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
DDR1-254ENST00000504679 MAP3K1Q13233 1512 aa28.5■■■□□ 2.15
DDR1-254ENST00000504679 MAGI3Q5TCQ9 1506 aa28.49■■■□□ 2.15
DDR1-254ENST00000504679 TIAM1Q13009 1591 aa28.49■■■□□ 2.15
DDR1-254ENST00000504679 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.48■■■□□ 2.159e-7■■■□□ 17.5
DDR1-254ENST00000504679 KIF14Q15058 1648 aa28.47■■■□□ 2.15
DDR1-254ENST00000504679 TEX14Q8IWB6 1497 aa28.44■■■□□ 2.14
DDR1-254ENST00000504679 KANK4Q5T7N3 995 aaPredicted RBP28.41■■■□□ 2.14
DDR1-254ENST00000504679 EHBP1L1Q8N3D4 1523 aa28.41■■■□□ 2.14
DDR1-254ENST00000504679 LRRC9Q6ZRR7 1453 aa28.4■■■□□ 2.14
DDR1-254ENST00000504679 PPRC1Q5VV67 1664 aaKnown RBP28.38■■■□□ 2.13
DDR1-254ENST00000504679 TTC37Q6PGP7 1564 aa28.38■■■□□ 2.13
DDR1-254ENST00000504679 PLCH2O75038 1416 aa28.37■■■□□ 2.13
DDR1-254ENST00000504679 EFCAB2Q5VUJ9 269 aa28.34■■■□□ 2.13
DDR1-254ENST00000504679 PHLDB1Q86UU1 1377 aa28.33■■■□□ 2.13
DDR1-254ENST00000504679 MYO5CQ9NQX4 1742 aa28.32■■■□□ 2.12
DDR1-254ENST00000504679 CCNB3Q8WWL7 1395 aa28.32■■■□□ 2.12
DDR1-254ENST00000504679 SUPT6HQ7KZ85 1726 aaKnown RBP28.31■■■□□ 2.12
DDR1-254ENST00000504679 FANCAO15360 1455 aa28.28■■■□□ 2.12
DDR1-254ENST00000504679 NEO1Q92859 1461 aa28.28■■■□□ 2.12
DDR1-254ENST00000504679 ARAP3Q8WWN8 1544 aa28.27■■■□□ 2.12
DDR1-254ENST00000504679 NCOA2Q15596 1464 aa28.27■■■□□ 2.12
DDR1-254ENST00000504679 ARHGAP5Q13017 1502 aa28.25■■■□□ 2.11
DDR1-254ENST00000504679 GPATCH8Q9UKJ3 1502 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms