RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
PAPD4-207ENST00000504233 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
PAPD4-207ENST00000504233 TIAM1Q13009 1591 aa16.46■□□□□ 0.22
PAPD4-207ENST00000504233 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
PAPD4-207ENST00000504233 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
PAPD4-207ENST00000504233 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
PAPD4-207ENST00000504233 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
PAPD4-207ENST00000504233 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
PAPD4-207ENST00000504233 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
PAPD4-207ENST00000504233 BCANQ96GW7 911 aa16.43■□□□□ 0.22
PAPD4-207ENST00000504233 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
PAPD4-207ENST00000504233 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
PAPD4-207ENST00000504233 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
PAPD4-207ENST00000504233 PCF11O94913 1555 aaKnown RBP16.4■□□□□ 0.22
PAPD4-207ENST00000504233 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
PAPD4-207ENST00000504233 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
PAPD4-207ENST00000504233 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
PAPD4-207ENST00000504233 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
PAPD4-207ENST00000504233 MAP3K1Q13233 1512 aa16.32■□□□□ 0.2
PAPD4-207ENST00000504233 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
PAPD4-207ENST00000504233 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
PAPD4-207ENST00000504233 MAPKBP1O60336 1514 aa16.3■□□□□ 0.2
PAPD4-207ENST00000504233 CFAP43Q8NDM7 1665 aa16.28■□□□□ 0.2
PAPD4-207ENST00000504233 FYCO1Q9BQS8 1478 aa16.25■□□□□ 0.19
PAPD4-207ENST00000504233 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
PAPD4-207ENST00000504233 CUL7Q14999 1698 aa16.25■□□□□ 0.19
PAPD4-207ENST00000504233 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
PAPD4-207ENST00000504233 EFCAB5A4FU69 1503 aa16.23■□□□□ 0.19
PAPD4-207ENST00000504233 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
PAPD4-207ENST00000504233 HIRIP3Q9BW71 556 aaPredicted RBP16.23■□□□□ 0.19
PAPD4-207ENST00000504233 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
PAPD4-207ENST00000504233 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
PAPD4-207ENST00000504233 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
PAPD4-207ENST00000504233 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
PAPD4-207ENST00000504233 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
PAPD4-207ENST00000504233 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
PAPD4-207ENST00000504233 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
PAPD4-207ENST00000504233 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
PAPD4-207ENST00000504233 ANP32EQ9BTT0 268 aa16.17■□□□□ 0.18
PAPD4-207ENST00000504233 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
PAPD4-207ENST00000504233 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
PAPD4-207ENST00000504233 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
PAPD4-207ENST00000504233 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
PAPD4-207ENST00000504233 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
PAPD4-207ENST00000504233 SUPT16HQ9Y5B9 1047 aaKnown RBP16.15■□□□□ 0.18
PAPD4-207ENST00000504233 TSHZ2Q9NRE2 1034 aa16.14■□□□□ 0.17
PAPD4-207ENST00000504233 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
PAPD4-207ENST00000504233 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
PAPD4-207ENST00000504233 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
PAPD4-207ENST00000504233 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
PAPD4-207ENST00000504233 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
PAPD4-207ENST00000504233 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.16
PAPD4-207ENST00000504233 RRP7BPQ9NSQ0 103 aa16.08■□□□□ 0.16
PAPD4-207ENST00000504233 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
PAPD4-207ENST00000504233 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
PAPD4-207ENST00000504233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.06■□□□□ 0.16
PAPD4-207ENST00000504233 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
PAPD4-207ENST00000504233 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
PAPD4-207ENST00000504233 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
PAPD4-207ENST00000504233 MAGI3Q5TCQ9 1506 aa16.03■□□□□ 0.16
PAPD4-207ENST00000504233 HFM1A2PYH4 1435 aa16.02■□□□□ 0.15
PAPD4-207ENST00000504233 NAIPQ13075 1403 aa16.01■□□□□ 0.15
PAPD4-207ENST00000504233 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
PAPD4-207ENST00000504233 SUPT6HQ7KZ85 1726 aaKnown RBP16■□□□□ 0.15
PAPD4-207ENST00000504233 TRIM52Q96A61 297 aa16■□□□□ 0.15
PAPD4-207ENST00000504233 CDK13Q14004 1512 aaKnown RBP15.99■□□□□ 0.15
PAPD4-207ENST00000504233 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
PAPD4-207ENST00000504233 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
PAPD4-207ENST00000504233 TIMELESSQ9UNS1 1208 aa15.99■□□□□ 0.15
PAPD4-207ENST00000504233 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
PAPD4-207ENST00000504233 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
PAPD4-207ENST00000504233 UGGT2Q9NYU1 1516 aa15.96■□□□□ 0.15
PAPD4-207ENST00000504233 IQGAP2Q13576 1575 aa15.96■□□□□ 0.15
PAPD4-207ENST00000504233 PRKCSHP14314 528 aaPredicted RBP15.95■□□□□ 0.14
PAPD4-207ENST00000504233 FOXD1Q16676 465 aa15.94■□□□□ 0.14
PAPD4-207ENST00000504233 EPRSP07814 1512 aaKnown RBP15.94■□□□□ 0.14
PAPD4-207ENST00000504233 THOC2Q8NI27 1593 aaKnown RBP15.93■□□□□ 0.14
PAPD4-207ENST00000504233 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
PAPD4-207ENST00000504233 ADAMTS12P58397 1594 aa15.93■□□□□ 0.14
PAPD4-207ENST00000504233 FKBP8Q14318 412 aa15.92■□□□□ 0.14
PAPD4-207ENST00000504233 HECW1Q76N89 1606 aa15.91■□□□□ 0.14
PAPD4-207ENST00000504233 ANP32CO43423 234 aa15.91■□□□□ 0.14
PAPD4-207ENST00000504233 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
PAPD4-207ENST00000504233 KDM6BO15054 1643 aa15.89■□□□□ 0.13
PAPD4-207ENST00000504233 ZNF644Q9H582 1327 aaPredicted RBP15.89■□□□□ 0.13
PAPD4-207ENST00000504233 FBLN2P98095 1184 aa15.88■□□□□ 0.13
PAPD4-207ENST00000504233 WDR62O43379 1518 aa15.86■□□□□ 0.13
PAPD4-207ENST00000504233 MPHOSPH9Q99550 1183 aa15.85■□□□□ 0.13
PAPD4-207ENST00000504233 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
PAPD4-207ENST00000504233 DENND4BO75064 1496 aaPredicted RBP15.84■□□□□ 0.13
PAPD4-207ENST00000504233 IRX6P78412 446 aaPredicted RBP15.83■□□□□ 0.12
PAPD4-207ENST00000504233 IFT140Q96RY7 1462 aa15.82■□□□□ 0.12
PAPD4-207ENST00000504233 HSPA5P11021 654 aaKnown RBP15.82■□□□□ 0.12
PAPD4-207ENST00000504233 KDM5BQ9UGL1 1544 aa15.82■□□□□ 0.12
PAPD4-207ENST00000504233 DISP1Q96F81 1524 aa15.81■□□□□ 0.12
PAPD4-207ENST00000504233 L3MBTL2Q969R5 705 aa15.8■□□□□ 0.12
PAPD4-207ENST00000504233 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
PAPD4-207ENST00000504233 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
PAPD4-207ENST00000504233 MIA2Q96PC5 1412 aa15.79■□□□□ 0.12
PAPD4-207ENST00000504233 GCC2Q8IWJ2 1684 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms