RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
SUB1-204ENST00000504016 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
SUB1-204ENST00000504016 LHX8Q68G74 356 aa13.53□□□□□ -0.24
SUB1-204ENST00000504016 NUBP1P53384 320 aa13.5□□□□□ -0.25
SUB1-204ENST00000504016 KIF12Q96FN5 646 aa13.49□□□□□ -0.25
SUB1-204ENST00000504016 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
SUB1-204ENST00000504016 MAP3K13O43283 966 aa13.44□□□□□ -0.26
SUB1-204ENST00000504016 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
SUB1-204ENST00000504016 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
SUB1-204ENST00000504016 ASTLQ6HA08 431 aaPredicted RBP13.39□□□□□ -0.27
SUB1-204ENST00000504016 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
SUB1-204ENST00000504016 ATMINO43313 823 aaPredicted RBP13.37□□□□□ -0.27
SUB1-204ENST00000504016 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
SUB1-204ENST00000504016 PCDHB13Q9Y5F0 798 aa13.34□□□□□ -0.27
SUB1-204ENST00000504016 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
SUB1-204ENST00000504016 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
SUB1-204ENST00000504016 ATN1P54259 1190 aaPredicted RBP13.3□□□□□ -0.28
SUB1-204ENST00000504016 SLC39A7Q92504 469 aa13.29□□□□□ -0.28
SUB1-204ENST00000504016 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
SUB1-204ENST00000504016 TIE1P35590 1138 aa13.28□□□□□ -0.28
SUB1-204ENST00000504016 METRNQ9UJH8 293 aa13.28□□□□□ -0.28
SUB1-204ENST00000504016 C7P10643 843 aa13.27□□□□□ -0.29
SUB1-204ENST00000504016 PYGBP11216 843 aa13.26□□□□□ -0.29
SUB1-204ENST00000504016 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
SUB1-204ENST00000504016 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
SUB1-204ENST00000504016 GSE1Q14687 1217 aa13.23□□□□□ -0.29
SUB1-204ENST00000504016 TTLL13PA6NNM8 815 aa13.22□□□□□ -0.29
SUB1-204ENST00000504016 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
SUB1-204ENST00000504016 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
SUB1-204ENST00000504016 TMEM106CQ9BVX2 250 aa13.15□□□□□ -0.3
SUB1-204ENST00000504016 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
SUB1-204ENST00000504016 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
SUB1-204ENST00000504016 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
SUB1-204ENST00000504016 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
SUB1-204ENST00000504016 SEC24BO95487 1268 aa13.1□□□□□ -0.31
SUB1-204ENST00000504016 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
SUB1-204ENST00000504016 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
SUB1-204ENST00000504016 IER5LQ5T953 404 aa13.07□□□□□ -0.32
SUB1-204ENST00000504016 ZNF467Q7Z7K2 595 aaPredicted RBP13.07□□□□□ -0.32
SUB1-204ENST00000504016 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
SUB1-204ENST00000504016 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
SUB1-204ENST00000504016 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
SUB1-204ENST00000504016 SCUBE2Q9NQ36 999 aa13□□□□□ -0.33
SUB1-204ENST00000504016 PLCG2P16885 1265 aa12.96□□□□□ -0.33
SUB1-204ENST00000504016 PSEN1P49768 467 aa12.94□□□□□ -0.34
SUB1-204ENST00000504016 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
SUB1-204ENST00000504016 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
SUB1-204ENST00000504016 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
SUB1-204ENST00000504016 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
SUB1-204ENST00000504016 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
SUB1-204ENST00000504016 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
SUB1-204ENST00000504016 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
SUB1-204ENST00000504016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.36
SUB1-204ENST00000504016 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.37
SUB1-204ENST00000504016 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
SUB1-204ENST00000504016 PDCD7Q8N8D1 485 aaKnown RBP12.75□□□□□ -0.37
SUB1-204ENST00000504016 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
SUB1-204ENST00000504016 POTEMA6NI47 508 aa12.72□□□□□ -0.37
SUB1-204ENST00000504016 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
SUB1-204ENST00000504016 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.71□□□□□ -0.37
SUB1-204ENST00000504016 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
SUB1-204ENST00000504016 RNF25Q96BH1 459 aaPredicted RBP12.7□□□□□ -0.38
SUB1-204ENST00000504016 VGFO15240 615 aaPredicted RBP12.67□□□□□ -0.38
SUB1-204ENST00000504016 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
SUB1-204ENST00000504016 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
SUB1-204ENST00000504016 LCE2DQ5TA82 110 aaPredicted RBP12.65□□□□□ -0.38
SUB1-204ENST00000504016 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
SUB1-204ENST00000504016 EFCAB3Q8N7B9 438 aa12.65□□□□□ -0.38
SUB1-204ENST00000504016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.64□□□□□ -0.39
SUB1-204ENST00000504016 ZFP91Q96JP5 570 aaPredicted RBP12.64□□□□□ -0.39
SUB1-204ENST00000504016 G3V3G9 751 aa12.62□□□□□ -0.39
SUB1-204ENST00000504016 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
SUB1-204ENST00000504016 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
SUB1-204ENST00000504016 BOLA1Q9Y3E2 137 aa12.57□□□□□ -0.4
SUB1-204ENST00000504016 SNPHO15079 494 aa12.56□□□□□ -0.4
SUB1-204ENST00000504016 SOX12O15370 315 aa12.55□□□□□ -0.4
SUB1-204ENST00000504016 PKD2Q13563 968 aa12.55□□□□□ -0.4
SUB1-204ENST00000504016 ST18O60284 1047 aa12.54□□□□□ -0.4
SUB1-204ENST00000504016 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
SUB1-204ENST00000504016 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
SUB1-204ENST00000504016 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
SUB1-204ENST00000504016 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
SUB1-204ENST00000504016 RGL2O15211 777 aa12.49□□□□□ -0.41
SUB1-204ENST00000504016 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
SUB1-204ENST00000504016 STK25O00506 426 aa12.48□□□□□ -0.41
SUB1-204ENST00000504016 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
SUB1-204ENST00000504016 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
SUB1-204ENST00000504016 NLRP6P59044 892 aa12.43□□□□□ -0.42
SUB1-204ENST00000504016 MICALL2Q8IY33 904 aa12.42□□□□□ -0.42
SUB1-204ENST00000504016 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
SUB1-204ENST00000504016 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
SUB1-204ENST00000504016 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
SUB1-204ENST00000504016 MFRPQ9BY79 579 aa12.36□□□□□ -0.43
SUB1-204ENST00000504016 HOXB3P14651 431 aaPredicted RBP12.31□□□□□ -0.44
SUB1-204ENST00000504016 EMP3P54852 163 aa12.31□□□□□ -0.44
SUB1-204ENST00000504016 TMEM92Q6UXU6 159 aa12.31□□□□□ -0.44
SUB1-204ENST00000504016 ZNF710Q8N1W2 664 aa12.31□□□□□ -0.44
SUB1-204ENST00000504016 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
SUB1-204ENST00000504016 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
SUB1-204ENST00000504016 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms