RNA–Protein interactions for RNA: ENST00000503867.1

PDS5A-204, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 2

Gene PDS5A, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-204ENST00000503867 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
PDS5A-204ENST00000503867 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
PDS5A-204ENST00000503867 POTEJP0CG39 1038 aa12.08□□□□□ -0.48
PDS5A-204ENST00000503867 UNC13AQ9UPW8 1703 aa12.08□□□□□ -0.48
PDS5A-204ENST00000503867 ZBTB22O15209 634 aa12.05□□□□□ -0.48
PDS5A-204ENST00000503867 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
PDS5A-204ENST00000503867 FAM163AQ96GL9 167 aaPredicted RBP12.02□□□□□ -0.49
PDS5A-204ENST00000503867 C7P10643 843 aa12.01□□□□□ -0.49
PDS5A-204ENST00000503867 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
PDS5A-204ENST00000503867 SLC39A7Q92504 469 aa12.01□□□□□ -0.49
PDS5A-204ENST00000503867 BICRAQ9NZM4 1560 aa12.01□□□□□ -0.49
PDS5A-204ENST00000503867 PHF12Q96QT6 1004 aa11.97□□□□□ -0.49
PDS5A-204ENST00000503867 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
PDS5A-204ENST00000503867 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
PDS5A-204ENST00000503867 SCUBE2Q9NQ36 999 aa11.95□□□□□ -0.5
PDS5A-204ENST00000503867 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
PDS5A-204ENST00000503867 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
PDS5A-204ENST00000503867 MS4A3Q96HJ5 214 aa11.81□□□□□ -0.52
PDS5A-204ENST00000503867 CECR2Q9BXF3 1484 aa11.79□□□□□ -0.52
PDS5A-204ENST00000503867 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
PDS5A-204ENST00000503867 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
PDS5A-204ENST00000503867 MMRN1Q13201 1228 aa11.75□□□□□ -0.53
PDS5A-204ENST00000503867 NPM1P06748 294 aaKnown RBP eCLIP11.73□□□□□ -0.53
PDS5A-204ENST00000503867 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
PDS5A-204ENST00000503867 SUPT5HO00267 1087 aaKnown RBP11.72□□□□□ -0.53
PDS5A-204ENST00000503867 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.53
PDS5A-204ENST00000503867 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
PDS5A-204ENST00000503867 SMARCA4P51532 1647 aa11.7□□□□□ -0.54
PDS5A-204ENST00000503867 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
PDS5A-204ENST00000503867 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
PDS5A-204ENST00000503867 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
PDS5A-204ENST00000503867 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
PDS5A-204ENST00000503867 ST18O60284 1047 aa11.61□□□□□ -0.55
PDS5A-204ENST00000503867 SMARCA2P51531 1590 aa11.61□□□□□ -0.55
PDS5A-204ENST00000503867 ATAD2BQ9ULI0 1458 aa11.6□□□□□ -0.55
PDS5A-204ENST00000503867 CC2D2AQ9P2K1 1620 aa11.6□□□□□ -0.55
PDS5A-204ENST00000503867 WIZO95785 1651 aa11.58□□□□□ -0.56
PDS5A-204ENST00000503867 PEG3Q9GZU2 1588 aa11.57□□□□□ -0.56
PDS5A-204ENST00000503867 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
PDS5A-204ENST00000503867 NCAPD3P42695 1498 aa11.55□□□□□ -0.56
PDS5A-204ENST00000503867 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
PDS5A-204ENST00000503867 COLQQ9Y215 455 aaPredicted RBP11.51□□□□□ -0.57
PDS5A-204ENST00000503867 TIE1P35590 1138 aa11.5□□□□□ -0.57
PDS5A-204ENST00000503867 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
PDS5A-204ENST00000503867 HMGXB3Q12766 1538 aa11.49□□□□□ -0.57
PDS5A-204ENST00000503867 KIF12Q96FN5 646 aa11.48□□□□□ -0.57
PDS5A-204ENST00000503867 TMEM121BQ9BXQ6 578 aaPredicted RBP11.48□□□□□ -0.57
PDS5A-204ENST00000503867 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
PDS5A-204ENST00000503867 SEC24BO95487 1268 aa11.47□□□□□ -0.57
PDS5A-204ENST00000503867 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
PDS5A-204ENST00000503867 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
PDS5A-204ENST00000503867 IER5LQ5T953 404 aa11.42□□□□□ -0.58
PDS5A-204ENST00000503867 TSPYL2Q9H2G4 693 aaPredicted RBP11.4□□□□□ -0.58
PDS5A-204ENST00000503867 TTLL13PA6NNM8 815 aa11.38□□□□□ -0.59
PDS5A-204ENST00000503867 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
PDS5A-204ENST00000503867 MAP3K13O43283 966 aa11.32□□□□□ -0.6
PDS5A-204ENST00000503867 SNPHO15079 494 aa11.29□□□□□ -0.6
PDS5A-204ENST00000503867 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
PDS5A-204ENST00000503867 CADPSQ9ULU8 1353 aa11.27□□□□□ -0.61
PDS5A-204ENST00000503867 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
PDS5A-204ENST00000503867 MARVELD3Q96A59 401 aa11.25□□□□□ -0.61
PDS5A-204ENST00000503867 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
PDS5A-204ENST00000503867 KRTAP3-2Q9BYR7 98 aa11.23□□□□□ -0.61
PDS5A-204ENST00000503867 CFTRP13569 1480 aa11.22□□□□□ -0.61
PDS5A-204ENST00000503867 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
PDS5A-204ENST00000503867 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
PDS5A-204ENST00000503867 PLCG2P16885 1265 aa11.18□□□□□ -0.62
PDS5A-204ENST00000503867 PDS5BQ9NTI5 1447 aa11.18□□□□□ -0.62
PDS5A-204ENST00000503867 NESP48681 1621 aa11.17□□□□□ -0.62
PDS5A-204ENST00000503867 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
PDS5A-204ENST00000503867 EMP3P54852 163 aa11.13□□□□□ -0.63
PDS5A-204ENST00000503867 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
PDS5A-204ENST00000503867 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
PDS5A-204ENST00000503867 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
PDS5A-204ENST00000503867 ERCC6Q03468 1493 aa11.1□□□□□ -0.63
PDS5A-204ENST00000503867 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
PDS5A-204ENST00000503867 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
PDS5A-204ENST00000503867 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
PDS5A-204ENST00000503867 CEP164Q9UPV0 1460 aa11.08□□□□□ -0.64
PDS5A-204ENST00000503867 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
PDS5A-204ENST00000503867 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
PDS5A-204ENST00000503867 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
PDS5A-204ENST00000503867 WRNQ14191 1432 aaPredicted RBP eCLIP11.05□□□□□ -0.64
PDS5A-204ENST00000503867 TMEM106CQ9BVX2 250 aa11.03□□□□□ -0.64
PDS5A-204ENST00000503867 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
PDS5A-204ENST00000503867 ABCC8Q09428 1581 aa11.03□□□□□ -0.64
PDS5A-204ENST00000503867 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
PDS5A-204ENST00000503867 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
PDS5A-204ENST00000503867 MRC2Q9UBG0 1479 aa11□□□□□ -0.65
PDS5A-204ENST00000503867 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
PDS5A-204ENST00000503867 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
PDS5A-204ENST00000503867 RNF166Q96A37 237 aaPredicted RBP10.98□□□□□ -0.65
PDS5A-204ENST00000503867 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.65
PDS5A-204ENST00000503867 CUX1P39880 1505 aa10.95□□□□□ -0.66
PDS5A-204ENST00000503867 URB2Q14146 1524 aaKnown RBP10.95□□□□□ -0.66
PDS5A-204ENST00000503867 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
PDS5A-204ENST00000503867 PROM2Q8N271 834 aa10.95□□□□□ -0.66
PDS5A-204ENST00000503867 TOP2BQ02880 1626 aa10.94□□□□□ -0.66
PDS5A-204ENST00000503867 SYNJ1O43426 1573 aa10.94□□□□□ -0.66
PDS5A-204ENST00000503867 PLEKHG5O94827 1062 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms