RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 CARMIL1Q5VZK9 1371 aa31.42■■■□□ 2.62
RNF4-204ENST00000503659 PRG4Q92954 1404 aaPredicted RBP31.41■■■□□ 2.62
RNF4-204ENST00000503659 JPH4Q96JJ6 628 aa31.41■■■□□ 2.62
RNF4-204ENST00000503659 KIAA0586Q9BVV6 1533 aa31.39■■■□□ 2.61
RNF4-204ENST00000503659 RAPGEF2Q9Y4G8 1499 aa31.21■■■□□ 2.59
RNF4-204ENST00000503659 IQGAP2Q13576 1575 aa31.2■■■□□ 2.58
RNF4-204ENST00000503659 ADCY10Q96PN6 1610 aa31.09■■■□□ 2.57
RNF4-204ENST00000503659 CTTNBP2Q8WZ74 1663 aa31.06■■■□□ 2.56
RNF4-204ENST00000503659 PRXQ9BXM0 1461 aa31.05■■■□□ 2.56
RNF4-204ENST00000503659 NPM1P06748 294 aaKnown RBP eCLIP31.04■■■□□ 2.56
RNF4-204ENST00000503659 UGGT2Q9NYU1 1516 aa31.02■■■□□ 2.56
RNF4-204ENST00000503659 CARMIL2Q6F5E8 1435 aa31.01■■■□□ 2.55
RNF4-204ENST00000503659 DISP1Q96F81 1524 aa31.01■■■□□ 2.55
RNF4-204ENST00000503659 MAPKBP1O60336 1514 aa30.98■■■□□ 2.55
RNF4-204ENST00000503659 KIF13AQ9H1H9 1805 aa30.97■■■□□ 2.55
RNF4-204ENST00000503659 TNIKQ9UKE5 1360 aa30.95■■■□□ 2.55
RNF4-204ENST00000503659 PTPRGP23470 1445 aa30.95■■■□□ 2.54
RNF4-204ENST00000503659 KIAA0556O60303 1618 aa30.93■■■□□ 2.54
RNF4-204ENST00000503659 ABCC10Q5T3U5 1492 aa30.91■■■□□ 2.54
RNF4-204ENST00000503659 TTBK1Q5TCY1 1321 aaPredicted RBP30.84■■■□□ 2.53
RNF4-204ENST00000503659 FAM69CQ0P6D2 419 aa30.84■■■□□ 2.53
RNF4-204ENST00000503659 EEA1Q15075 1411 aa30.83■■■□□ 2.53
RNF4-204ENST00000503659 CSRNP3Q8WYN3 585 aa30.82■■■□□ 2.52
RNF4-204ENST00000503659 DIP2BQ9P265 1576 aa30.81■■■□□ 2.52
RNF4-204ENST00000503659 UHRF1BP1LA0JNW5 1464 aa30.8■■■□□ 2.52
RNF4-204ENST00000503659 ABCC2Q92887 1545 aa30.79■■■□□ 2.52
RNF4-204ENST00000503659 UACAQ9BZF9 1416 aa30.77■■■□□ 2.52
RNF4-204ENST00000503659 GOLGA3Q08378 1498 aa30.75■■■□□ 2.51
RNF4-204ENST00000503659 CHIC1Q5VXU3 224 aa30.69■■■□□ 2.5
RNF4-204ENST00000503659 KDM5BQ9UGL1 1544 aa30.66■■■□□ 2.5
RNF4-204ENST00000503659 ZCCHC11Q5TAX3 1644 aaKnown RBP30.65■■■□□ 2.5
RNF4-204ENST00000503659 PLB1Q6P1J6 1458 aa30.64■■■□□ 2.5
RNF4-204ENST00000503659 KIF21BO75037 1637 aa30.64■■■□□ 2.5
RNF4-204ENST00000503659 FAM9AQ8IZU1 332 aaPredicted RBP30.63■■■□□ 2.49
RNF4-204ENST00000503659 ASXL2Q76L83 1435 aa30.63■■■□□ 2.49
RNF4-204ENST00000503659 SAMD9Q5K651 1589 aa30.62■■■□□ 2.49
RNF4-204ENST00000503659 ABCA8O94911 1581 aa30.61■■■□□ 2.49
RNF4-204ENST00000503659 TSPOAP1O95153 1857 aa30.57■■■□□ 2.48
RNF4-204ENST00000503659 GLI2P10070 1586 aa30.56■■■□□ 2.48
RNF4-204ENST00000503659 AEBP2Q6ZN18 517 aaPredicted RBP30.55■■■□□ 2.48
RNF4-204ENST00000503659 KDM6BO15054 1643 aa30.48■■■□□ 2.47
RNF4-204ENST00000503659 PPRC1Q5VV67 1664 aaKnown RBP30.47■■■□□ 2.47
RNF4-204ENST00000503659 P3H3Q8IVL6 736 aa30.46■■■□□ 2.47
RNF4-204ENST00000503659 EPRSP07814 1512 aaKnown RBP30.46■■■□□ 2.47
RNF4-204ENST00000503659 MAP3K4Q9Y6R4 1608 aa30.42■■■□□ 2.46
RNF4-204ENST00000503659 WDR7Q9Y4E6 1490 aa30.42■■■□□ 2.46
RNF4-204ENST00000503659 RAPGEF6Q8TEU7 1601 aa30.37■■■□□ 2.45
RNF4-204ENST00000503659 EFCAB5A4FU69 1503 aa30.36■■■□□ 2.45
RNF4-204ENST00000503659 FHOD3Q2V2M9 1422 aa30.34■■■□□ 2.45
RNF4-204ENST00000503659 RANGAP1P46060 587 aaPredicted RBP30.34■■■□□ 2.45
RNF4-204ENST00000503659 ATP10BO94823 1461 aa30.31■■■□□ 2.44
RNF4-204ENST00000503659 TEX14Q8IWB6 1497 aa30.31■■■□□ 2.44
RNF4-204ENST00000503659 EHMT2Q96KQ7 1210 aa30.27■■■□□ 2.44
RNF4-204ENST00000503659 CFAP43Q8NDM7 1665 aa30.25■■■□□ 2.43
RNF4-204ENST00000503659 ARID3CA6NKF2 412 aa30.24■■■□□ 2.43
RNF4-204ENST00000503659 NUP153P49790 1475 aaKnown RBP30.24■■■□□ 2.43
RNF4-204ENST00000503659 UBTFP17480 764 aaKnown RBP30.22■■■□□ 2.43
RNF4-204ENST00000503659 KCNH8Q96L42 1107 aa30.17■■■□□ 2.42
RNF4-204ENST00000503659 CD109Q6YHK3 1445 aa30.16■■■□□ 2.42
RNF4-204ENST00000503659 MAGI3Q5TCQ9 1506 aa30.16■■■□□ 2.42
RNF4-204ENST00000503659 COL17A1Q9UMD9 1497 aaPredicted RBP30.15■■■□□ 2.42
RNF4-204ENST00000503659 ARHGAP35Q9NRY4 1499 aa30.14■■■□□ 2.42
RNF4-204ENST00000503659 ABCA9Q8IUA7 1624 aa30.11■■■□□ 2.41
RNF4-204ENST00000503659 KDM4FA0A1W2PPD8 638 aa30.07■■■□□ 2.4
RNF4-204ENST00000503659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.02■■■□□ 2.4
RNF4-204ENST00000503659 HNRNPUL2Q1KMD3 747 aaKnown RBP30.02■■■□□ 2.4
RNF4-204ENST00000503659 FMN1Q68DA7 1419 aa30.02■■■□□ 2.4
RNF4-204ENST00000503659 CDK13Q14004 1512 aaKnown RBP30■■■□□ 2.39
RNF4-204ENST00000503659 HECW1Q76N89 1606 aa29.99■■■□□ 2.39
RNF4-204ENST00000503659 PHLDB1Q86UU1 1377 aa29.95■■■□□ 2.39
RNF4-204ENST00000503659 ARAP3Q8WWN8 1544 aa29.92■■■□□ 2.38
RNF4-204ENST00000503659 LRRIQ1Q96JM4 1722 aa29.92■■■□□ 2.38
RNF4-204ENST00000503659 PLEKHD1A6NEE1 506 aa29.9■■■□□ 2.38
RNF4-204ENST00000503659 ADGRL1O94910 1474 aa29.89■■■□□ 2.38
RNF4-204ENST00000503659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.89■■■□□ 2.38
RNF4-204ENST00000503659 TTC37Q6PGP7 1564 aa29.88■■■□□ 2.37
RNF4-204ENST00000503659 PCF11O94913 1555 aaKnown RBP29.85■■■□□ 2.37
RNF4-204ENST00000503659 NEO1Q92859 1461 aa29.84■■■□□ 2.37
RNF4-204ENST00000503659 ATP1B4Q9UN42 357 aaPredicted RBP29.8■■■□□ 2.36
RNF4-204ENST00000503659 CLIP1P30622 1438 aa29.78■■■□□ 2.36
RNF4-204ENST00000503659 CASKIN1Q8WXD9 1431 aa29.77■■■□□ 2.36
RNF4-204ENST00000503659 FRMPD1Q5SYB0 1578 aa29.77■■■□□ 2.36
RNF4-204ENST00000503659 CFAP74Q9C0B2 1584 aa29.76■■■□□ 2.35
RNF4-204ENST00000503659 KIF14Q15058 1648 aa29.74■■■□□ 2.35
RNF4-204ENST00000503659 FANCAO15360 1455 aa29.72■■■□□ 2.35
RNF4-204ENST00000503659 FYCO1Q9BQS8 1478 aa29.7■■■□□ 2.35
RNF4-204ENST00000503659 MYO5CQ9NQX4 1742 aa29.7■■■□□ 2.34
RNF4-204ENST00000503659 TROQ12816 1431 aaPredicted RBP29.7■■■□□ 2.34
RNF4-204ENST00000503659 CCDC18Q5T9S5 1454 aa29.69■■■□□ 2.34
RNF4-204ENST00000503659 RICTORQ6R327 1708 aa29.69■■■□□ 2.34
RNF4-204ENST00000503659 RAPGEF3O95398 923 aa29.67■■■□□ 2.34
RNF4-204ENST00000503659 CDK11AQ9UQ88 783 aaPredicted RBP29.67■■■□□ 2.34
RNF4-204ENST00000503659 AKNAQ7Z591 1439 aa29.67■■■□□ 2.34
RNF4-204ENST00000503659 PLCH2O75038 1416 aa29.65■■■□□ 2.34
RNF4-204ENST00000503659 DENND4BO75064 1496 aaPredicted RBP29.61■■■□□ 2.33
RNF4-204ENST00000503659 CEP162Q5TB80 1403 aa29.59■■■□□ 2.33
RNF4-204ENST00000503659 ZMYM4Q5VZL5 1548 aa29.55■■■□□ 2.32
RNF4-204ENST00000503659 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
RNF4-204ENST00000503659 CDC42BPBQ9Y5S2 1711 aa29.54■■■□□ 2.32
RNF4-204ENST00000503659 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms