RNA–Protein interactions for RNA: ENST00000502692.5

ACTN3-201, Transcript of actinin alpha 3 (gene/pseudogene), humanhuman

TSL 2 BASIC

Gene ACTN3, Length 3,084 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN3-201ENST00000502692 ADAMTS12P58397 1594 aa17.81■□□□□ 0.44
ACTN3-201ENST00000502692 SYNJ2O15056 1496 aa17.81■□□□□ 0.44
ACTN3-201ENST00000502692 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
ACTN3-201ENST00000502692 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.44
ACTN3-201ENST00000502692 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
ACTN3-201ENST00000502692 PRXQ9BXM0 1461 aa17.74■□□□□ 0.43
ACTN3-201ENST00000502692 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
ACTN3-201ENST00000502692 RANGAP1P46060 587 aaPredicted RBP17.7■□□□□ 0.42
ACTN3-201ENST00000502692 CHD1O14646 1710 aa17.7■□□□□ 0.42
ACTN3-201ENST00000502692 KIF21BO75037 1637 aa17.7■□□□□ 0.42
ACTN3-201ENST00000502692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.69■□□□□ 0.42
ACTN3-201ENST00000502692 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
ACTN3-201ENST00000502692 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
ACTN3-201ENST00000502692 ACIN1Q9UKV3 1341 aaKnown RBP17.63■□□□□ 0.41
ACTN3-201ENST00000502692 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
ACTN3-201ENST00000502692 NUP160Q12769 1436 aa17.6■□□□□ 0.41
ACTN3-201ENST00000502692 CLIP1P30622 1438 aa17.6■□□□□ 0.41
ACTN3-201ENST00000502692 CCER1Q8TC90 406 aaPredicted RBP17.6■□□□□ 0.41
ACTN3-201ENST00000502692 CEP170Q5SW79 1584 aa17.58■□□□□ 0.4
ACTN3-201ENST00000502692 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
ACTN3-201ENST00000502692 CTTNBP2Q8WZ74 1663 aa17.53■□□□□ 0.4
ACTN3-201ENST00000502692 IQGAP2Q13576 1575 aa17.52■□□□□ 0.4
ACTN3-201ENST00000502692 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
ACTN3-201ENST00000502692 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
ACTN3-201ENST00000502692 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
ACTN3-201ENST00000502692 APLP2Q06481 763 aa17.45■□□□□ 0.38
ACTN3-201ENST00000502692 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
ACTN3-201ENST00000502692 PRG4Q92954 1404 aaPredicted RBP17.42■□□□□ 0.38
ACTN3-201ENST00000502692 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
ACTN3-201ENST00000502692 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
ACTN3-201ENST00000502692 SHROOM2Q13796 1616 aa17.39■□□□□ 0.37
ACTN3-201ENST00000502692 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
ACTN3-201ENST00000502692 EFCAB5A4FU69 1503 aa17.37■□□□□ 0.37
ACTN3-201ENST00000502692 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
ACTN3-201ENST00000502692 KIAA0556O60303 1618 aa17.33■□□□□ 0.36
ACTN3-201ENST00000502692 ARAP1Q96P48 1450 aa17.33■□□□□ 0.36
ACTN3-201ENST00000502692 DISP1Q96F81 1524 aa17.32■□□□□ 0.36
ACTN3-201ENST00000502692 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
ACTN3-201ENST00000502692 SAMD9Q5K651 1589 aa17.3■□□□□ 0.36
ACTN3-201ENST00000502692 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
ACTN3-201ENST00000502692 ARHGAP35Q9NRY4 1499 aa17.29■□□□□ 0.36
ACTN3-201ENST00000502692 FHOD3Q2V2M9 1422 aa17.29■□□□□ 0.36
ACTN3-201ENST00000502692 PTPRGP23470 1445 aa17.29■□□□□ 0.36
ACTN3-201ENST00000502692 KANK4Q5T7N3 995 aaPredicted RBP17.29■□□□□ 0.36
ACTN3-201ENST00000502692 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
ACTN3-201ENST00000502692 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
ACTN3-201ENST00000502692 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
ACTN3-201ENST00000502692 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
ACTN3-201ENST00000502692 DIEXFQ68CQ4 756 aaKnown RBP17.25■□□□□ 0.35
ACTN3-201ENST00000502692 FMN1Q68DA7 1419 aa17.24■□□□□ 0.35
ACTN3-201ENST00000502692 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
ACTN3-201ENST00000502692 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
ACTN3-201ENST00000502692 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.35
ACTN3-201ENST00000502692 UACAQ9BZF9 1416 aa17.16■□□□□ 0.34
ACTN3-201ENST00000502692 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
ACTN3-201ENST00000502692 PLB1Q6P1J6 1458 aa17.13■□□□□ 0.33
ACTN3-201ENST00000502692 RAPGEF6Q8TEU7 1601 aa17.11■□□□□ 0.33
ACTN3-201ENST00000502692 CASKIN1Q8WXD9 1431 aa17.1■□□□□ 0.33
ACTN3-201ENST00000502692 ABCC2Q92887 1545 aa17.1■□□□□ 0.33
ACTN3-201ENST00000502692 ABCA8O94911 1581 aa17.09■□□□□ 0.33
ACTN3-201ENST00000502692 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
ACTN3-201ENST00000502692 HECW1Q76N89 1606 aa17.09■□□□□ 0.33
ACTN3-201ENST00000502692 FYCO1Q9BQS8 1478 aa17.09■□□□□ 0.33
ACTN3-201ENST00000502692 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.33
ACTN3-201ENST00000502692 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
ACTN3-201ENST00000502692 ITGAEP38570 1179 aa17.07■□□□□ 0.32
ACTN3-201ENST00000502692 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
ACTN3-201ENST00000502692 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
ACTN3-201ENST00000502692 NUP153P49790 1475 aaKnown RBP17.03■□□□□ 0.32
ACTN3-201ENST00000502692 CCDC18Q5T9S5 1454 aa17.03■□□□□ 0.32
ACTN3-201ENST00000502692 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.32
ACTN3-201ENST00000502692 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
ACTN3-201ENST00000502692 EPRSP07814 1512 aaKnown RBP17■□□□□ 0.31
ACTN3-201ENST00000502692 CCNB3Q8WWL7 1395 aa17■□□□□ 0.31
ACTN3-201ENST00000502692 KDM5BQ9UGL1 1544 aa16.99■□□□□ 0.31
ACTN3-201ENST00000502692 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
ACTN3-201ENST00000502692 ATP10BO94823 1461 aa16.98■□□□□ 0.31
ACTN3-201ENST00000502692 TIAM1Q13009 1591 aa16.97■□□□□ 0.31
ACTN3-201ENST00000502692 CDK13Q14004 1512 aaKnown RBP16.97■□□□□ 0.31
ACTN3-201ENST00000502692 DHX57Q6P158 1386 aaKnown RBP16.96■□□□□ 0.31
ACTN3-201ENST00000502692 ZCCHC11Q5TAX3 1644 aaKnown RBP16.96■□□□□ 0.31
ACTN3-201ENST00000502692 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
ACTN3-201ENST00000502692 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
ACTN3-201ENST00000502692 LRRC9Q6ZRR7 1453 aa16.93■□□□□ 0.3
ACTN3-201ENST00000502692 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
ACTN3-201ENST00000502692 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
ACTN3-201ENST00000502692 PHLDB1Q86UU1 1377 aa16.91■□□□□ 0.3
ACTN3-201ENST00000502692 FAM50AQ14320 339 aaKnown RBP16.9■□□□□ 0.3
ACTN3-201ENST00000502692 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
ACTN3-201ENST00000502692 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
ACTN3-201ENST00000502692 WDR7Q9Y4E6 1490 aa16.88■□□□□ 0.29
ACTN3-201ENST00000502692 MAPKBP1O60336 1514 aa16.88■□□□□ 0.29
ACTN3-201ENST00000502692 LRRIQ1Q96JM4 1722 aa16.88■□□□□ 0.29
ACTN3-201ENST00000502692 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
ACTN3-201ENST00000502692 EHBP1L1Q8N3D4 1523 aa16.85■□□□□ 0.29
ACTN3-201ENST00000502692 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
ACTN3-201ENST00000502692 RAB3GAP2Q9H2M9 1393 aa16.82■□□□□ 0.28
ACTN3-201ENST00000502692 MIER1Q8N108 512 aa16.82■□□□□ 0.28
ACTN3-201ENST00000502692 KIF14Q15058 1648 aa16.82■□□□□ 0.28
ACTN3-201ENST00000502692 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms