RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 KIF21BO75037 1637 aa23.52■■□□□ 1.36
RNF4-202ENST00000502316 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
RNF4-202ENST00000502316 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
RNF4-202ENST00000502316 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
RNF4-202ENST00000502316 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
RNF4-202ENST00000502316 IQGAP2Q13576 1575 aa23.45■■□□□ 1.34
RNF4-202ENST00000502316 CTTNBP2Q8WZ74 1663 aa23.44■■□□□ 1.34
RNF4-202ENST00000502316 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
RNF4-202ENST00000502316 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
RNF4-202ENST00000502316 ERCC6L2Q5T890 1561 aa23.38■■□□□ 1.33
RNF4-202ENST00000502316 GOLGA3Q08378 1498 aa23.37■■□□□ 1.33
RNF4-202ENST00000502316 UGGT2Q9NYU1 1516 aa23.36■■□□□ 1.33
RNF4-202ENST00000502316 ARAP1Q96P48 1450 aa23.35■■□□□ 1.33
RNF4-202ENST00000502316 DISP1Q96F81 1524 aa23.28■■□□□ 1.32
RNF4-202ENST00000502316 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
RNF4-202ENST00000502316 KIAA0556O60303 1618 aa23.23■■□□□ 1.31
RNF4-202ENST00000502316 UBTFP17480 764 aaKnown RBP23.21■■□□□ 1.31
RNF4-202ENST00000502316 CYB5RLQ6IPT4 315 aa23.21■■□□□ 1.31
RNF4-202ENST00000502316 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
RNF4-202ENST00000502316 SAMD9Q5K651 1589 aa23.18■■□□□ 1.3
RNF4-202ENST00000502316 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
RNF4-202ENST00000502316 PTPRGP23470 1445 aa23.13■■□□□ 1.29
RNF4-202ENST00000502316 EFCAB5A4FU69 1503 aa23.12■■□□□ 1.29
RNF4-202ENST00000502316 ADCY10Q96PN6 1610 aa23.03■■□□□ 1.28
RNF4-202ENST00000502316 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
RNF4-202ENST00000502316 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
RNF4-202ENST00000502316 FHOD3Q2V2M9 1422 aa23■■□□□ 1.27
RNF4-202ENST00000502316 UACAQ9BZF9 1416 aa23■■□□□ 1.27
RNF4-202ENST00000502316 UHRF1BP1LA0JNW5 1464 aa23■■□□□ 1.27
RNF4-202ENST00000502316 P3H3Q8IVL6 736 aa23■■□□□ 1.27
RNF4-202ENST00000502316 LOC105371045A0A1W2PR82 267 aa22.99■■□□□ 1.27
RNF4-202ENST00000502316 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
RNF4-202ENST00000502316 ABCC2Q92887 1545 aa22.98■■□□□ 1.27
RNF4-202ENST00000502316 ABCA8O94911 1581 aa22.97■■□□□ 1.27
RNF4-202ENST00000502316 PLB1Q6P1J6 1458 aa22.96■■□□□ 1.27
RNF4-202ENST00000502316 CLIP1P30622 1438 aa22.94■■□□□ 1.26
RNF4-202ENST00000502316 CEP162Q5TB80 1403 aa22.91■■□□□ 1.26
RNF4-202ENST00000502316 KDM5BQ9UGL1 1544 aa22.89■■□□□ 1.26
RNF4-202ENST00000502316 FMN1Q68DA7 1419 aa22.89■■□□□ 1.25
RNF4-202ENST00000502316 RAPGEF6Q8TEU7 1601 aa22.88■■□□□ 1.25
RNF4-202ENST00000502316 MAPKBP1O60336 1514 aa22.86■■□□□ 1.25
RNF4-202ENST00000502316 NPM1P06748 294 aaKnown RBP eCLIP22.84■■□□□ 1.25
RNF4-202ENST00000502316 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
RNF4-202ENST00000502316 NUP153P49790 1475 aaKnown RBP22.81■■□□□ 1.24
RNF4-202ENST00000502316 ATP10BO94823 1461 aa22.76■■□□□ 1.23
RNF4-202ENST00000502316 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
RNF4-202ENST00000502316 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
RNF4-202ENST00000502316 CASKIN1Q8WXD9 1431 aa22.74■■□□□ 1.23
RNF4-202ENST00000502316 PCF11O94913 1555 aaKnown RBP22.73■■□□□ 1.23
RNF4-202ENST00000502316 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
RNF4-202ENST00000502316 ABCC10Q5T3U5 1492 aa22.7■■□□□ 1.22
RNF4-202ENST00000502316 EPRSP07814 1512 aaKnown RBP22.68■■□□□ 1.22
RNF4-202ENST00000502316 DIP2BQ9P265 1576 aa22.67■■□□□ 1.22
RNF4-202ENST00000502316 WDR7Q9Y4E6 1490 aa22.67■■□□□ 1.22
RNF4-202ENST00000502316 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
RNF4-202ENST00000502316 CDK13Q14004 1512 aaKnown RBP22.65■■□□□ 1.22
RNF4-202ENST00000502316 LRRIQ1Q96JM4 1722 aa22.65■■□□□ 1.22
RNF4-202ENST00000502316 KIF13AQ9H1H9 1805 aa22.64■■□□□ 1.22
RNF4-202ENST00000502316 VPS8Q8N3P4 1428 aa22.64■■□□□ 1.21
RNF4-202ENST00000502316 CCDC18Q5T9S5 1454 aa22.62■■□□□ 1.21
RNF4-202ENST00000502316 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
RNF4-202ENST00000502316 GLI2P10070 1586 aa22.61■■□□□ 1.21
RNF4-202ENST00000502316 ATP1B4Q9UN42 357 aaPredicted RBP22.6■■□□□ 1.21
RNF4-202ENST00000502316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
RNF4-202ENST00000502316 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
RNF4-202ENST00000502316 FAM69CQ0P6D2 419 aa22.57■■□□□ 1.2
RNF4-202ENST00000502316 PLEKHD1A6NEE1 506 aa22.54■■□□□ 1.2
RNF4-202ENST00000502316 CDK11AQ9UQ88 783 aaPredicted RBP22.52■■□□□ 1.2
RNF4-202ENST00000502316 MAP3K4Q9Y6R4 1608 aa22.5■■□□□ 1.19
RNF4-202ENST00000502316 TROQ12816 1431 aaPredicted RBP22.49■■□□□ 1.19
RNF4-202ENST00000502316 KCNH8Q96L42 1107 aa22.49■■□□□ 1.19
RNF4-202ENST00000502316 ABCA9Q8IUA7 1624 aa22.49■■□□□ 1.19
RNF4-202ENST00000502316 CFAP43Q8NDM7 1665 aa22.48■■□□□ 1.19
RNF4-202ENST00000502316 MAGI3Q5TCQ9 1506 aa22.47■■□□□ 1.19
RNF4-202ENST00000502316 TIAM1Q13009 1591 aa22.44■■□□□ 1.18
RNF4-202ENST00000502316 MAP3K1Q13233 1512 aa22.44■■□□□ 1.18
RNF4-202ENST00000502316 PPRC1Q5VV67 1664 aaKnown RBP22.43■■□□□ 1.18
RNF4-202ENST00000502316 KIF14Q15058 1648 aa22.42■■□□□ 1.18
RNF4-202ENST00000502316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.42■■□□□ 1.18
RNF4-202ENST00000502316 CD109Q6YHK3 1445 aa22.41■■□□□ 1.18
RNF4-202ENST00000502316 TTC37Q6PGP7 1564 aa22.4■■□□□ 1.18
RNF4-202ENST00000502316 TSPOAP1O95153 1857 aa22.39■■□□□ 1.17
RNF4-202ENST00000502316 EHBP1L1Q8N3D4 1523 aa22.38■■□□□ 1.17
RNF4-202ENST00000502316 MTUS2Q5JR59 1369 aa22.37■■□□□ 1.17
RNF4-202ENST00000502316 TEX14Q8IWB6 1497 aa22.36■■□□□ 1.17
RNF4-202ENST00000502316 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
RNF4-202ENST00000502316 ARAP3Q8WWN8 1544 aa22.31■■□□□ 1.16
RNF4-202ENST00000502316 PLCH2O75038 1416 aa22.3■■□□□ 1.16
RNF4-202ENST00000502316 MYO5CQ9NQX4 1742 aa22.29■■□□□ 1.16
RNF4-202ENST00000502316 APLP2Q06481 763 aa22.27■■□□□ 1.16
RNF4-202ENST00000502316 NEO1Q92859 1461 aa22.27■■□□□ 1.16
RNF4-202ENST00000502316 SUPT6HQ7KZ85 1726 aaKnown RBP22.26■■□□□ 1.15
RNF4-202ENST00000502316 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
RNF4-202ENST00000502316 PREX2Q70Z35 1606 aa22.25■■□□□ 1.15
RNF4-202ENST00000502316 CFAP74Q9C0B2 1584 aa22.25■■□□□ 1.15
RNF4-202ENST00000502316 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
RNF4-202ENST00000502316 FANCAO15360 1455 aa22.24■■□□□ 1.15
RNF4-202ENST00000502316 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
RNF4-202ENST00000502316 NCOA2Q15596 1464 aa22.23■■□□□ 1.15
RNF4-202ENST00000502316 GPATCH8Q9UKJ3 1502 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms