RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 ADAMTS12P58397 1594 aa28.59■■■□□ 2.17
PLXND1-202ENST00000501038 EFCAB5A4FU69 1503 aa28.59■■■□□ 2.17
PLXND1-202ENST00000501038 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
PLXND1-202ENST00000501038 FHAD1B1AJZ9 1412 aa28.56■■■□□ 2.16
PLXND1-202ENST00000501038 ZNF608Q9ULD9 1512 aaPredicted RBP28.56■■■□□ 2.16
PLXND1-202ENST00000501038 EIF4G3O43432 1585 aaKnown RBP28.51■■■□□ 2.15
PLXND1-202ENST00000501038 SAMD9Q5K651 1589 aa28.44■■■□□ 2.14
PLXND1-202ENST00000501038 MAP3K1Q13233 1512 aa28.42■■■□□ 2.14
PLXND1-202ENST00000501038 FHOD3Q2V2M9 1422 aa28.41■■■□□ 2.14
PLXND1-202ENST00000501038 PCF11O94913 1555 aaKnown RBP28.4■■■□□ 2.14
PLXND1-202ENST00000501038 TIAM1Q13009 1591 aa28.39■■■□□ 2.13
PLXND1-202ENST00000501038 SNAPC4Q5SXM2 1469 aa28.38■■■□□ 2.13
PLXND1-202ENST00000501038 P3H3Q8IVL6 736 aa28.37■■■□□ 2.13
PLXND1-202ENST00000501038 KANK4Q5T7N3 995 aaPredicted RBP28.36■■■□□ 2.13
PLXND1-202ENST00000501038 CFAP43Q8NDM7 1665 aa28.35■■■□□ 2.13
PLXND1-202ENST00000501038 IQGAP2Q13576 1575 aa28.33■■■□□ 2.13
PLXND1-202ENST00000501038 ZEB1P37275 1124 aaPredicted RBP28.33■■■□□ 2.13
PLXND1-202ENST00000501038 FYCO1Q9BQS8 1478 aa28.32■■■□□ 2.12
PLXND1-202ENST00000501038 MAGI1Q96QZ7 1491 aaPredicted RBP28.3■■■□□ 2.12
PLXND1-202ENST00000501038 FMN1Q68DA7 1419 aa28.3■■■□□ 2.12
PLXND1-202ENST00000501038 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
PLXND1-202ENST00000501038 GRIN2AQ12879 1464 aa28.25■■■□□ 2.11
PLXND1-202ENST00000501038 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
PLXND1-202ENST00000501038 UGGT2Q9NYU1 1516 aa28.19■■■□□ 2.1
PLXND1-202ENST00000501038 SYNJ2O15056 1496 aa28.19■■■□□ 2.1
PLXND1-202ENST00000501038 KIAA0586Q9BVV6 1533 aa28.19■■■□□ 2.1
PLXND1-202ENST00000501038 RRBP1Q9P2E9 1410 aaKnown RBP28.17■■■□□ 2.1
PLXND1-202ENST00000501038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.14■■■□□ 2.09
PLXND1-202ENST00000501038 ATP1B4Q9UN42 357 aaPredicted RBP28.12■■■□□ 2.09
PLXND1-202ENST00000501038 LRRIQ1Q96JM4 1722 aa28.12■■■□□ 2.09
PLXND1-202ENST00000501038 HNRNPUL2Q1KMD3 747 aaKnown RBP28.11■■■□□ 2.09
PLXND1-202ENST00000501038 CCER1Q8TC90 406 aaPredicted RBP28.09■■■□□ 2.09
PLXND1-202ENST00000501038 CEP170Q5SW79 1584 aa28.09■■■□□ 2.09
PLXND1-202ENST00000501038 CHMP7Q8WUX9 453 aaPredicted RBP28.07■■■□□ 2.08
PLXND1-202ENST00000501038 KIAA0556O60303 1618 aa28.05■■■□□ 2.08
PLXND1-202ENST00000501038 CCNB3Q8WWL7 1395 aa28.04■■■□□ 2.08
PLXND1-202ENST00000501038 HECW1Q76N89 1606 aa28.02■■■□□ 2.08
PLXND1-202ENST00000501038 NUP160Q12769 1436 aa28.02■■■□□ 2.08
PLXND1-202ENST00000501038 DISP1Q96F81 1524 aa28.01■■■□□ 2.07
PLXND1-202ENST00000501038 CCDC18Q5T9S5 1454 aa27.97■■■□□ 2.07
PLXND1-202ENST00000501038 PHLDB1Q86UU1 1377 aa27.96■■■□□ 2.07
PLXND1-202ENST00000501038 FBLN2P98095 1184 aa27.96■■■□□ 2.07
PLXND1-202ENST00000501038 EHBP1L1Q8N3D4 1523 aa27.91■■■□□ 2.06
PLXND1-202ENST00000501038 MTUS2Q5JR59 1369 aa27.9■■■□□ 2.06
PLXND1-202ENST00000501038 SUPT6HQ7KZ85 1726 aaKnown RBP27.87■■■□□ 2.05
PLXND1-202ENST00000501038 CHD1O14646 1710 aa27.87■■■□□ 2.05
PLXND1-202ENST00000501038 EPRSP07814 1512 aaKnown RBP27.86■■■□□ 2.05
PLXND1-202ENST00000501038 RAPGEF6Q8TEU7 1601 aa27.84■■■□□ 2.05
PLXND1-202ENST00000501038 CARMIL2Q6F5E8 1435 aa27.81■■■□□ 2.04
PLXND1-202ENST00000501038 MAGI3Q5TCQ9 1506 aa27.81■■■□□ 2.04
PLXND1-202ENST00000501038 NCOA2Q15596 1464 aa27.79■■■□□ 2.04
PLXND1-202ENST00000501038 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
PLXND1-202ENST00000501038 CDK13Q14004 1512 aaKnown RBP27.79■■■□□ 2.04
PLXND1-202ENST00000501038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.78■■■□□ 2.04
PLXND1-202ENST00000501038 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
PLXND1-202ENST00000501038 FGD6Q6ZV73 1430 aa27.76■■■□□ 2.03
PLXND1-202ENST00000501038 NUP153P49790 1475 aaKnown RBP27.73■■■□□ 2.03
PLXND1-202ENST00000501038 FAM50AQ14320 339 aaKnown RBP27.73■■■□□ 2.03
PLXND1-202ENST00000501038 ITGAEP38570 1179 aa27.72■■■□□ 2.03
PLXND1-202ENST00000501038 MYOM3Q5VTT5 1437 aa27.71■■■□□ 2.03
PLXND1-202ENST00000501038 PLB1Q6P1J6 1458 aa27.64■■■□□ 2.01
PLXND1-202ENST00000501038 SHROOM2Q13796 1616 aa27.64■■■□□ 2.01
PLXND1-202ENST00000501038 DHX57Q6P158 1386 aaKnown RBP27.63■■■□□ 2.01
PLXND1-202ENST00000501038 PTPN23Q9H3S7 1636 aa27.62■■■□□ 2.01
PLXND1-202ENST00000501038 ABCA8O94911 1581 aa27.62■■■□□ 2.01
PLXND1-202ENST00000501038 PRG4Q92954 1404 aaPredicted RBP27.6■■■□□ 2.01
PLXND1-202ENST00000501038 ARID3CA6NKF2 412 aa27.6■■■□□ 2.01
PLXND1-202ENST00000501038 SETD5Q9C0A6 1442 aa27.6■■■□□ 2.01
PLXND1-202ENST00000501038 CLSPNQ9HAW4 1339 aa27.58■■■□□ 2.01
PLXND1-202ENST00000501038 RAB3GAP2Q9H2M9 1393 aa27.57■■■□□ 2
PLXND1-202ENST00000501038 TCOF1Q13428 1488 aaKnown RBP27.56■■■□□ 2
PLXND1-202ENST00000501038 CDK11AQ9UQ88 783 aaPredicted RBP27.55■■■□□ 2
PLXND1-202ENST00000501038 MIA2Q96PC5 1412 aa27.52■■■□□ 2
PLXND1-202ENST00000501038 ADCY10Q96PN6 1610 aa27.51■■□□□ 1.99
PLXND1-202ENST00000501038 TROQ12816 1431 aaPredicted RBP27.51■■□□□ 1.99
PLXND1-202ENST00000501038 CLASP1Q7Z460 1538 aa27.49■■□□□ 1.99
PLXND1-202ENST00000501038 PTPRGP23470 1445 aa27.48■■□□□ 1.99
PLXND1-202ENST00000501038 PTPRKQ15262 1439 aa27.44■■□□□ 1.98
PLXND1-202ENST00000501038 ATP10BO94823 1461 aa27.42■■□□□ 1.98
PLXND1-202ENST00000501038 ITSN2Q9NZM3 1697 aa27.41■■□□□ 1.98
PLXND1-202ENST00000501038 KIF14Q15058 1648 aa27.4■■□□□ 1.98
PLXND1-202ENST00000501038 HFM1A2PYH4 1435 aa27.39■■□□□ 1.97
PLXND1-202ENST00000501038 ERCC6L2Q5T890 1561 aa27.38■■□□□ 1.97
PLXND1-202ENST00000501038 UACAQ9BZF9 1416 aa27.34■■□□□ 1.97
PLXND1-202ENST00000501038 MAPKBP1O60336 1514 aa27.34■■□□□ 1.97
PLXND1-202ENST00000501038 GCC2Q8IWJ2 1684 aa27.33■■□□□ 1.97
PLXND1-202ENST00000501038 PLEKHD1A6NEE1 506 aa27.31■■□□□ 1.96
PLXND1-202ENST00000501038 NAIPQ13075 1403 aa27.31■■□□□ 1.96
PLXND1-202ENST00000501038 DNMT1P26358 1616 aaKnown RBP27.3■■□□□ 1.96
PLXND1-202ENST00000501038 AKNAQ7Z591 1439 aa27.29■■□□□ 1.96
PLXND1-202ENST00000501038 GPATCH8Q9UKJ3 1502 aaKnown RBP27.28■■□□□ 1.96
PLXND1-202ENST00000501038 ABCC2Q92887 1545 aa27.27■■□□□ 1.96
PLXND1-202ENST00000501038 CDC42BPAQ5VT25 1732 aa27.26■■□□□ 1.95
PLXND1-202ENST00000501038 ABCC10Q5T3U5 1492 aa27.26■■□□□ 1.95
PLXND1-202ENST00000501038 DAPK1P53355 1430 aa27.25■■□□□ 1.95
PLXND1-202ENST00000501038 CAMSAP2Q08AD1 1489 aa27.23■■□□□ 1.95
PLXND1-202ENST00000501038 ABCC5O15440 1437 aa27.2■■□□□ 1.95
PLXND1-202ENST00000501038 CFDP1Q9UEE9 299 aaPredicted RBP27.19■■□□□ 1.94
PLXND1-202ENST00000501038 ZNF644Q9H582 1327 aaPredicted RBP27.18■■□□□ 1.94
PLXND1-202ENST00000501038 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms