RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 RRBP1Q9P2E9 1410 aaKnown RBP23.74■■□□□ 1.39
ZCCHC3-201ENST00000500893 FHOD3Q2V2M9 1422 aa23.73■■□□□ 1.39
ZCCHC3-201ENST00000500893 RAD54L2Q9Y4B4 1467 aa23.72■■□□□ 1.39
ZCCHC3-201ENST00000500893 PHLDB1Q86UU1 1377 aa23.72■■□□□ 1.39
ZCCHC3-201ENST00000500893 BCANQ96GW7 911 aa23.69■■□□□ 1.38
ZCCHC3-201ENST00000500893 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
ZCCHC3-201ENST00000500893 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.37
ZCCHC3-201ENST00000500893 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
ZCCHC3-201ENST00000500893 NESP48681 1621 aa23.62■■□□□ 1.37
ZCCHC3-201ENST00000500893 TDRD9Q8NDG6 1382 aaKnown RBP23.62■■□□□ 1.37
ZCCHC3-201ENST00000500893 CHIC2Q9UKJ5 165 aa23.59■■□□□ 1.37
ZCCHC3-201ENST00000500893 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
ZCCHC3-201ENST00000500893 FHAD1B1AJZ9 1412 aa23.56■■□□□ 1.36
ZCCHC3-201ENST00000500893 MTUS2Q5JR59 1369 aa23.55■■□□□ 1.36
ZCCHC3-201ENST00000500893 SUPT16HQ9Y5B9 1047 aaKnown RBP23.55■■□□□ 1.36
ZCCHC3-201ENST00000500893 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
ZCCHC3-201ENST00000500893 TRIM52Q96A61 297 aa23.52■■□□□ 1.36
ZCCHC3-201ENST00000500893 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
ZCCHC3-201ENST00000500893 RRP7BPQ9NSQ0 103 aa23.5■■□□□ 1.35
ZCCHC3-201ENST00000500893 TONSLQ96HA7 1378 aa23.45■■□□□ 1.34
ZCCHC3-201ENST00000500893 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
ZCCHC3-201ENST00000500893 CNGB1Q14028 1251 aaPredicted RBP23.42■■□□□ 1.34
ZCCHC3-201ENST00000500893 ANP32CO43423 234 aa23.41■■□□□ 1.34
ZCCHC3-201ENST00000500893 PCF11O94913 1555 aaKnown RBP23.41■■□□□ 1.34
ZCCHC3-201ENST00000500893 MAPKBP1O60336 1514 aa23.41■■□□□ 1.34
ZCCHC3-201ENST00000500893 FKBP8Q14318 412 aa23.4■■□□□ 1.34
ZCCHC3-201ENST00000500893 PPP1R15AO75807 674 aaPredicted RBP23.38■■□□□ 1.33
ZCCHC3-201ENST00000500893 WDR97A6NE52 1622 aa23.38■■□□□ 1.33
ZCCHC3-201ENST00000500893 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
ZCCHC3-201ENST00000500893 FOXD1Q16676 465 aa23.32■■□□□ 1.32
ZCCHC3-201ENST00000500893 NEFLP07196 543 aa23.31■■□□□ 1.32
ZCCHC3-201ENST00000500893 FMN1Q68DA7 1419 aa23.28■■□□□ 1.32
ZCCHC3-201ENST00000500893 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
ZCCHC3-201ENST00000500893 FGD6Q6ZV73 1430 aa23.27■■□□□ 1.32
ZCCHC3-201ENST00000500893 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
ZCCHC3-201ENST00000500893 DNMBPQ6XZF7 1577 aa23.25■■□□□ 1.31
ZCCHC3-201ENST00000500893 FBLN2P98095 1184 aa23.25■■□□□ 1.31
ZCCHC3-201ENST00000500893 POLR3GLQ9BT43 218 aa23.23■■□□□ 1.31
ZCCHC3-201ENST00000500893 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
ZCCHC3-201ENST00000500893 MAP3K1Q13233 1512 aa23.22■■□□□ 1.31
ZCCHC3-201ENST00000500893 CCDC18Q5T9S5 1454 aa23.21■■□□□ 1.31
ZCCHC3-201ENST00000500893 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.31
ZCCHC3-201ENST00000500893 PTPRKQ15262 1439 aa23.2■■□□□ 1.3
ZCCHC3-201ENST00000500893 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
ZCCHC3-201ENST00000500893 IRX6P78412 446 aaPredicted RBP23.19■■□□□ 1.3
ZCCHC3-201ENST00000500893 HNRNPUQ00839 825 aaKnown RBP eCLIP23.17■■□□□ 1.3
ZCCHC3-201ENST00000500893 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
ZCCHC3-201ENST00000500893 TIMELESSQ9UNS1 1208 aa23.16■■□□□ 1.3
ZCCHC3-201ENST00000500893 ZNF777Q9ULD5 760 aaPredicted RBP23.15■■□□□ 1.3
ZCCHC3-201ENST00000500893 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
ZCCHC3-201ENST00000500893 NCOA2Q15596 1464 aa23.14■■□□□ 1.3
ZCCHC3-201ENST00000500893 TSHZ2Q9NRE2 1034 aa23.14■■□□□ 1.29
ZCCHC3-201ENST00000500893 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.29
ZCCHC3-201ENST00000500893 PDS5BQ9NTI5 1447 aa23.12■■□□□ 1.29
ZCCHC3-201ENST00000500893 EFCAB5A4FU69 1503 aa23.1■■□□□ 1.29
ZCCHC3-201ENST00000500893 HSPA5P11021 654 aaKnown RBP23.09■■□□□ 1.29
ZCCHC3-201ENST00000500893 MYOM3Q5VTT5 1437 aa23.09■■□□□ 1.29
ZCCHC3-201ENST00000500893 SENP3-EIF4A1A0A087X0R7 540 aa23.08■■□□□ 1.29
ZCCHC3-201ENST00000500893 CFAP43Q8NDM7 1665 aa23.07■■□□□ 1.28
ZCCHC3-201ENST00000500893 ZNF644Q9H582 1327 aaPredicted RBP23.05■■□□□ 1.28
ZCCHC3-201ENST00000500893 UACAQ9BZF9 1416 aa23.05■■□□□ 1.28
ZCCHC3-201ENST00000500893 NAIPQ13075 1403 aa23.05■■□□□ 1.28
ZCCHC3-201ENST00000500893 FAM9BQ8IZU0 186 aa23.04■■□□□ 1.28
ZCCHC3-201ENST00000500893 MPHOSPH9Q99550 1183 aa23.04■■□□□ 1.28
ZCCHC3-201ENST00000500893 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
ZCCHC3-201ENST00000500893 HFM1A2PYH4 1435 aa23.03■■□□□ 1.28
ZCCHC3-201ENST00000500893 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
ZCCHC3-201ENST00000500893 EIF4G2P78344 907 aaKnown RBP eCLIP23.01■■□□□ 1.27
ZCCHC3-201ENST00000500893 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
ZCCHC3-201ENST00000500893 CCER2I3L3R5 266 aa23.01■■□□□ 1.27
ZCCHC3-201ENST00000500893 CUL7Q14999 1698 aa22.99■■□□□ 1.27
ZCCHC3-201ENST00000500893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.96■■□□□ 1.27
ZCCHC3-201ENST00000500893 CDK13Q14004 1512 aaKnown RBP22.95■■□□□ 1.26
ZCCHC3-201ENST00000500893 WASHC2AQ641Q2 1341 aa22.94■■□□□ 1.26
ZCCHC3-201ENST00000500893 CTTNBP2Q8WZ74 1663 aa22.94■■□□□ 1.26
ZCCHC3-201ENST00000500893 CCDC184Q52MB2 194 aa22.92■■□□□ 1.26
ZCCHC3-201ENST00000500893 PTPN23Q9H3S7 1636 aa22.92■■□□□ 1.26
ZCCHC3-201ENST00000500893 GRIN2BQ13224 1484 aa22.91■■□□□ 1.26
ZCCHC3-201ENST00000500893 MYT1Q01538 1121 aa22.91■■□□□ 1.26
ZCCHC3-201ENST00000500893 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
ZCCHC3-201ENST00000500893 MRS2Q9HD23 443 aa22.9■■□□□ 1.26
ZCCHC3-201ENST00000500893 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.25
ZCCHC3-201ENST00000500893 CDK11AQ9UQ88 783 aaPredicted RBP22.88■■□□□ 1.25
ZCCHC3-201ENST00000500893 C11orf95C9JLR9 678 aaPredicted RBP22.87■■□□□ 1.25
ZCCHC3-201ENST00000500893 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
ZCCHC3-201ENST00000500893 MAGI3Q5TCQ9 1506 aa22.87■■□□□ 1.25
ZCCHC3-201ENST00000500893 SUPT6HQ7KZ85 1726 aaKnown RBP22.84■■□□□ 1.25
ZCCHC3-201ENST00000500893 EHBP1L1Q8N3D4 1523 aa22.84■■□□□ 1.25
ZCCHC3-201ENST00000500893 NBPF8Q3BBV2 869 aa22.83■■□□□ 1.25
ZCCHC3-201ENST00000500893 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
ZCCHC3-201ENST00000500893 KDM2AQ9Y2K7 1162 aa22.81■■□□□ 1.24
ZCCHC3-201ENST00000500893 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
ZCCHC3-201ENST00000500893 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
ZCCHC3-201ENST00000500893 KIF21AQ7Z4S6 1674 aa22.77■■□□□ 1.24
ZCCHC3-201ENST00000500893 RBM19Q9Y4C8 960 aaKnown RBP22.77■■□□□ 1.24
ZCCHC3-201ENST00000500893 SAMD9Q5K651 1589 aa22.77■■□□□ 1.24
ZCCHC3-201ENST00000500893 UGGT2Q9NYU1 1516 aa22.76■■□□□ 1.23
ZCCHC3-201ENST00000500893 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
ZCCHC3-201ENST00000500893 LRRIQ1Q96JM4 1722 aa22.75■■□□□ 1.23
ZCCHC3-201ENST00000500893 KDM6BO15054 1643 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms