RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ABCB7O75027 752 aa6.52□□□□□ -1.37
CLTC-209ENST00000498711 CHGAP10645 457 aaKnown RBP6.52□□□□□ -1.37
CLTC-209ENST00000498711 MIER1Q8N108 512 aa6.52□□□□□ -1.37
CLTC-209ENST00000498711 NBR1Q14596 966 aa6.5□□□□□ -1.37
CLTC-209ENST00000498711 CECR2Q9BXF3 1484 aa6.5□□□□□ -1.37
CLTC-209ENST00000498711 CIZ1Q9ULV3 898 aaPredicted RBP6.49□□□□□ -1.37
CLTC-209ENST00000498711 SSUH2Q9Y2M2 353 aa6.49□□□□□ -1.37
CLTC-209ENST00000498711 SPDYE2BA6NHP3 402 aa6.49□□□□□ -1.37
CLTC-209ENST00000498711 SUPT5HO00267 1087 aaKnown RBP6.49□□□□□ -1.37
CLTC-209ENST00000498711 SPDYE6P0CI01 402 aa6.49□□□□□ -1.37
CLTC-209ENST00000498711 SPDYE2Q495Y8 402 aa6.49□□□□□ -1.37
CLTC-209ENST00000498711 DNAJC5Q9H3Z4 198 aa6.49□□□□□ -1.37
CLTC-209ENST00000498711 ZBTB47Q9UFB7 747 aaPredicted RBP6.49□□□□□ -1.37
CLTC-209ENST00000498711 HRCP23327 699 aa6.49□□□□□ -1.37
CLTC-209ENST00000498711 BAZ1AQ9NRL2 1556 aaPredicted RBP6.48□□□□□ -1.37
CLTC-209ENST00000498711 SMARCA4P51532 1647 aa6.48□□□□□ -1.37
CLTC-209ENST00000498711 PLEKHG5O94827 1062 aa6.48□□□□□ -1.37
CLTC-209ENST00000498711 NCAPD3P42695 1498 aa6.48□□□□□ -1.37
CLTC-209ENST00000498711 PABPN1Q86U42 306 aaKnown RBP eCLIP6.47□□□□□ -1.37
CLTC-209ENST00000498711 TRIM41Q8WV44 630 aa6.47□□□□□ -1.37
CLTC-209ENST00000498711 OSCARQ8IYS5 282 aa6.46□□□□□ -1.37
CLTC-209ENST00000498711 HS6ST3Q8IZP7 471 aa6.46□□□□□ -1.38
CLTC-209ENST00000498711 ATAD2BQ9ULI0 1458 aa6.4□□□□□ -1.39
CLTC-209ENST00000498711 RBM42Q9BTD8 480 aaKnown RBP6.39□□□□□ -1.39
CLTC-209ENST00000498711 CUX2O14529 1486 aa6.39□□□□□ -1.39
CLTC-209ENST00000498711 LAMC3Q9Y6N6 1575 aa6.38□□□□□ -1.39
CLTC-209ENST00000498711 GSE1Q14687 1217 aa6.38□□□□□ -1.39
CLTC-209ENST00000498711 RNF25Q96BH1 459 aaPredicted RBP6.38□□□□□ -1.39
CLTC-209ENST00000498711 TIMELESSQ9UNS1 1208 aa6.37□□□□□ -1.39
CLTC-209ENST00000498711 PRDM2Q13029 1718 aa6.35□□□□□ -1.39
CLTC-209ENST00000498711 TULP1O00294 542 aaPredicted RBP6.35□□□□□ -1.39
CLTC-209ENST00000498711 NKX1-1Q15270 411 aaPredicted RBP6.35□□□□□ -1.39
CLTC-209ENST00000498711 RIOK3O14730 519 aaKnown RBP6.34□□□□□ -1.39
CLTC-209ENST00000498711 GTF3C3Q9Y5Q9 886 aa6.34□□□□□ -1.39
CLTC-209ENST00000498711 BAZ1BQ9UIG0 1483 aaKnown RBP6.33□□□□□ -1.4
CLTC-209ENST00000498711 GTPBP6O43824 516 aaPredicted RBP6.33□□□□□ -1.4
CLTC-209ENST00000498711 POTEHQ6S545 545 aa6.32□□□□□ -1.4
CLTC-209ENST00000498711 ERICH6Q7L0X2 663 aa6.32□□□□□ -1.4
CLTC-209ENST00000498711 RSF1Q96T23 1441 aaPredicted RBP6.31□□□□□ -1.4
CLTC-209ENST00000498711 THOC2Q8NI27 1593 aaKnown RBP6.3□□□□□ -1.4
CLTC-209ENST00000498711 STK25O00506 426 aa6.3□□□□□ -1.4
CLTC-209ENST00000498711 NUBP1P53384 320 aa6.3□□□□□ -1.4
CLTC-209ENST00000498711 TOP2AP11388 1531 aaKnown RBP6.29□□□□□ -1.4
CLTC-209ENST00000498711 VGFO15240 615 aaPredicted RBP6.29□□□□□ -1.4
CLTC-209ENST00000498711 DCAF8Q5TAQ9 597 aa6.29□□□□□ -1.4
CLTC-209ENST00000498711 RYDENQ9NUL5 291 aaKnown RBP6.28□□□□□ -1.4
CLTC-209ENST00000498711 MROH2BQ7Z745 1585 aa6.28□□□□□ -1.4
CLTC-209ENST00000498711 TMEM132AQ24JP5 1023 aa6.28□□□□□ -1.4
CLTC-209ENST00000498711 PCGF6Q9BYE7 350 aa6.28□□□□□ -1.4
CLTC-209ENST00000498711 TRIM26Q12899 539 aaPredicted RBP6.26□□□□□ -1.41
CLTC-209ENST00000498711 FAM212AQ96EL1 285 aa6.26□□□□□ -1.41
CLTC-209ENST00000498711 P3H3Q8IVL6 736 aa6.26□□□□□ -1.41
CLTC-209ENST00000498711 WDR62O43379 1518 aa6.25□□□□□ -1.41
CLTC-209ENST00000498711 AKT1S1Q96B36 256 aa6.25□□□□□ -1.41
CLTC-209ENST00000498711 ARXQ96QS3 562 aa6.25□□□□□ -1.41
CLTC-209ENST00000498711 SGIP1Q9BQI5 828 aa6.24□□□□□ -1.41
CLTC-209ENST00000498711 WDR97A6NE52 1622 aa6.23□□□□□ -1.41
CLTC-209ENST00000498711 LOC105371045A0A1W2PR82 267 aa6.23□□□□□ -1.41
CLTC-209ENST00000498711 PDS5BQ9NTI5 1447 aa6.23□□□□□ -1.41
CLTC-209ENST00000498711 CHRM1P11229 460 aaPredicted RBP6.23□□□□□ -1.41
CLTC-209ENST00000498711 STK24Q9Y6E0 443 aa6.23□□□□□ -1.41
CLTC-209ENST00000498711 BCL11BQ9C0K0 894 aaPredicted RBP6.22□□□□□ -1.41
CLTC-209ENST00000498711 KIF21AQ7Z4S6 1674 aa6.22□□□□□ -1.41
CLTC-209ENST00000498711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.21□□□□□ -1.42
CLTC-209ENST00000498711 ZFP91Q96JP5 570 aaPredicted RBP6.21□□□□□ -1.42
CLTC-209ENST00000498711 WIZO95785 1651 aa6.21□□□□□ -1.42
CLTC-209ENST00000498711 ZEB1P37275 1124 aaPredicted RBP6.21□□□□□ -1.42
CLTC-209ENST00000498711 PPARGC1BQ86YN6 1023 aaKnown RBP6.2□□□□□ -1.42
CLTC-209ENST00000498711 MRC2Q9UBG0 1479 aa6.2□□□□□ -1.42
CLTC-209ENST00000498711 CFTRP13569 1480 aa6.2□□□□□ -1.42
CLTC-209ENST00000498711 ERCC6Q03468 1493 aa6.19□□□□□ -1.42
CLTC-209ENST00000498711 CADPSQ9ULU8 1353 aa6.19□□□□□ -1.42
CLTC-209ENST00000498711 SPDYE1Q8NFV5 336 aaPredicted RBP6.19□□□□□ -1.42
CLTC-209ENST00000498711 CREBZFQ9NS37 354 aa6.18□□□□□ -1.42
CLTC-209ENST00000498711 ABCC8Q09428 1581 aa6.18□□□□□ -1.42
CLTC-209ENST00000498711 MNX1P50219 401 aaPredicted RBP6.17□□□□□ -1.42
CLTC-209ENST00000498711 C14orf37Q86TY3 774 aa6.17□□□□□ -1.42
CLTC-209ENST00000498711 RASEFQ8IZ41 740 aa6.17□□□□□ -1.42
CLTC-209ENST00000498711 WDR70Q9NW82 654 aa6.17□□□□□ -1.42
CLTC-209ENST00000498711 LMOD2Q6P5Q4 547 aa6.16□□□□□ -1.42
CLTC-209ENST00000498711 KCNV2Q8TDN2 545 aa6.16□□□□□ -1.42
CLTC-209ENST00000498711 CEP164Q9UPV0 1460 aa6.16□□□□□ -1.42
CLTC-209ENST00000498711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.15□□□□□ -1.42
CLTC-209ENST00000498711 DAXXQ9UER7 740 aaPredicted RBP6.15□□□□□ -1.42
CLTC-209ENST00000498711 PRR29P0C7W0 189 aa6.15□□□□□ -1.43
CLTC-209ENST00000498711 PYGBP11216 843 aa6.15□□□□□ -1.43
CLTC-209ENST00000498711 CLEC11AQ9Y240 323 aa6.13□□□□□ -1.43
CLTC-209ENST00000498711 HOMEZQ8IX15 550 aa6.12□□□□□ -1.43
CLTC-209ENST00000498711 NESP48681 1621 aa6.12□□□□□ -1.43
CLTC-209ENST00000498711 CADPS2Q86UW7 1296 aa6.12□□□□□ -1.43
CLTC-209ENST00000498711 FANCD2Q9BXW9 1451 aa6.12□□□□□ -1.43
CLTC-209ENST00000498711 DNMBPQ6XZF7 1577 aa6.12□□□□□ -1.43
CLTC-209ENST00000498711 BRPF1P55201 1214 aaPredicted RBP6.1□□□□□ -1.43
CLTC-209ENST00000498711 WRNQ14191 1432 aaPredicted RBP eCLIP6.1□□□□□ -1.43
CLTC-209ENST00000498711 IFT140Q96RY7 1462 aa6.09□□□□□ -1.44
CLTC-209ENST00000498711 ZNF467Q7Z7K2 595 aaPredicted RBP6.08□□□□□ -1.44
CLTC-209ENST00000498711 ARHGEF1Q92888 912 aaKnown RBP6.07□□□□□ -1.44
CLTC-209ENST00000498711 CHRDL2Q6WN34 429 aa6.06□□□□□ -1.44
CLTC-209ENST00000498711 CCDC88BA6NC98 1476 aa6.06□□□□□ -1.44
CLTC-209ENST00000498711 ZC3H15Q8WU90 426 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms