RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 PLEKHG5O94827 1062 aa9.71□□□□□ -0.86
SGMS1-205ENST00000498514 C7P10643 843 aa9.71□□□□□ -0.86
SGMS1-205ENST00000498514 METRNQ9UJH8 293 aa9.71□□□□□ -0.86
SGMS1-205ENST00000498514 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.86
SGMS1-205ENST00000498514 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
SGMS1-205ENST00000498514 MIER1Q8N108 512 aa9.68□□□□□ -0.86
SGMS1-205ENST00000498514 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
SGMS1-205ENST00000498514 PLSCR2Q9NRY7 297 aa9.67□□□□□ -0.86
SGMS1-205ENST00000498514 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
SGMS1-205ENST00000498514 MAMSTRQ6ZN01 415 aa9.63□□□□□ -0.87
SGMS1-205ENST00000498514 POTEJP0CG39 1038 aa9.61□□□□□ -0.87
SGMS1-205ENST00000498514 RASEFQ8IZ41 740 aa9.61□□□□□ -0.87
SGMS1-205ENST00000498514 POTEMA6NI47 508 aa9.6□□□□□ -0.87
SGMS1-205ENST00000498514 MAP3K13O43283 966 aa9.6□□□□□ -0.87
SGMS1-205ENST00000498514 PLCD3Q8N3E9 789 aa9.59□□□□□ -0.87
SGMS1-205ENST00000498514 BMP2KQ9NSY1 1161 aaPredicted RBP9.59□□□□□ -0.87
SGMS1-205ENST00000498514 TIE1P35590 1138 aa9.57□□□□□ -0.88
SGMS1-205ENST00000498514 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
SGMS1-205ENST00000498514 TRPC6Q9Y210 931 aa9.56□□□□□ -0.88
SGMS1-205ENST00000498514 SCUBE2Q9NQ36 999 aa9.55□□□□□ -0.88
SGMS1-205ENST00000498514 ZBTB47Q9UFB7 747 aaPredicted RBP9.53□□□□□ -0.88
SGMS1-205ENST00000498514 POTEFA5A3E0 1075 aa9.52□□□□□ -0.89
SGMS1-205ENST00000498514 TTLL13PA6NNM8 815 aa9.5□□□□□ -0.89
SGMS1-205ENST00000498514 SGIP1Q9BQI5 828 aa9.5□□□□□ -0.89
SGMS1-205ENST00000498514 SEC24BO95487 1268 aa9.49□□□□□ -0.89
SGMS1-205ENST00000498514 PCDHB13Q9Y5F0 798 aa9.49□□□□□ -0.89
SGMS1-205ENST00000498514 NUBP1P53384 320 aa9.48□□□□□ -0.89
SGMS1-205ENST00000498514 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
SGMS1-205ENST00000498514 FAM163AQ96GL9 167 aaPredicted RBP9.47□□□□□ -0.89
SGMS1-205ENST00000498514 COLQQ9Y215 455 aaPredicted RBP9.46□□□□□ -0.9
SGMS1-205ENST00000498514 IER5LQ5T953 404 aa9.45□□□□□ -0.9
SGMS1-205ENST00000498514 FKBP8Q14318 412 aa9.44□□□□□ -0.9
SGMS1-205ENST00000498514 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
SGMS1-205ENST00000498514 TRIM35Q9UPQ4 493 aa9.44□□□□□ -0.9
SGMS1-205ENST00000498514 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
SGMS1-205ENST00000498514 IFNL1Q8IU54 200 aa9.42□□□□□ -0.9
SGMS1-205ENST00000498514 TMEM106CQ9BVX2 250 aa9.39□□□□□ -0.91
SGMS1-205ENST00000498514 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
SGMS1-205ENST00000498514 PLCG2P16885 1265 aa9.33□□□□□ -0.92
SGMS1-205ENST00000498514 FBXO3Q9UK99 471 aa9.32□□□□□ -0.92
SGMS1-205ENST00000498514 PYGBP11216 843 aa9.31□□□□□ -0.92
SGMS1-205ENST00000498514 SLAIN1Q8ND83 568 aa9.31□□□□□ -0.92
SGMS1-205ENST00000498514 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
SGMS1-205ENST00000498514 OCEL1Q9H607 264 aa9.26□□□□□ -0.93
SGMS1-205ENST00000498514 PCDHB8Q9UN66 801 aa9.26□□□□□ -0.93
SGMS1-205ENST00000498514 ST18O60284 1047 aa9.24□□□□□ -0.93
SGMS1-205ENST00000498514 CDAN1Q8IWY9 1227 aa9.24□□□□□ -0.93
SGMS1-205ENST00000498514 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
SGMS1-205ENST00000498514 GSE1Q14687 1217 aa9.21□□□□□ -0.94
SGMS1-205ENST00000498514 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
SGMS1-205ENST00000498514 VASPP50552 380 aaPredicted RBP9.18□□□□□ -0.94
SGMS1-205ENST00000498514 ZNF467Q7Z7K2 595 aaPredicted RBP9.18□□□□□ -0.94
SGMS1-205ENST00000498514 SNPHO15079 494 aa9.17□□□□□ -0.94
SGMS1-205ENST00000498514 GOLGA2Q08379 1002 aa9.17□□□□□ -0.94
SGMS1-205ENST00000498514 CHRM1P11229 460 aaPredicted RBP9.14□□□□□ -0.95
SGMS1-205ENST00000498514 MKRN3Q13064 507 aaKnown RBP9.14□□□□□ -0.95
SGMS1-205ENST00000498514 TMEM121BQ9BXQ6 578 aaPredicted RBP9.14□□□□□ -0.95
SGMS1-205ENST00000498514 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
SGMS1-205ENST00000498514 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
SGMS1-205ENST00000498514 C3orf67Q6ZVT6 689 aa9.1□□□□□ -0.95
SGMS1-205ENST00000498514 PSEN1P49768 467 aa9.09□□□□□ -0.95
SGMS1-205ENST00000498514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.09□□□□□ -0.955e-7■■■■■ 28
SGMS1-205ENST00000498514 MARVELD3Q96A59 401 aa9.07□□□□□ -0.96
SGMS1-205ENST00000498514 PDAP1Q13442 181 aaKnown RBP9.04□□□□□ -0.96
SGMS1-205ENST00000498514 SPOCK2Q92563 424 aa9.04□□□□□ -0.96
SGMS1-205ENST00000498514 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
SGMS1-205ENST00000498514 CIZ1Q9ULV3 898 aaPredicted RBP9.02□□□□□ -0.97
SGMS1-205ENST00000498514 ILDR1Q86SU0 546 aaPredicted RBP9.01□□□□□ -0.97
SGMS1-205ENST00000498514 EMP3P54852 163 aa9□□□□□ -0.97
SGMS1-205ENST00000498514 MMRN1Q13201 1228 aa9□□□□□ -0.97
SGMS1-205ENST00000498514 IFNLR1Q8IU57 520 aaPredicted RBP9□□□□□ -0.97
SGMS1-205ENST00000498514 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
SGMS1-205ENST00000498514 CABP2Q9NPB3 220 aa8.99□□□□□ -0.97
SGMS1-205ENST00000498514 G3V3G9 751 aa8.98□□□□□ -0.97
SGMS1-205ENST00000498514 BOLA1Q9Y3E2 137 aa8.95□□□□□ -0.98
SGMS1-205ENST00000498514 FAM205CA6NFA0 338 aa8.93□□□□□ -0.98
SGMS1-205ENST00000498514 HS3ST6Q96QI5 342 aa8.93□□□□□ -0.98
SGMS1-205ENST00000498514 POTEB3A0JP26 581 aa8.91□□□□□ -0.98
SGMS1-205ENST00000498514 POTEBQ6S5H4 581 aa8.91□□□□□ -0.98
SGMS1-205ENST00000498514 TRIM41Q8WV44 630 aa8.89□□□□□ -0.99
SGMS1-205ENST00000498514 HOXB3P14651 431 aaPredicted RBP8.88□□□□□ -0.99
SGMS1-205ENST00000498514 ZNF710Q8N1W2 664 aa8.88□□□□□ -0.99
SGMS1-205ENST00000498514 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
SGMS1-205ENST00000498514 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
SGMS1-205ENST00000498514 EFCAB3Q8N7B9 438 aa8.86□□□□□ -0.99
SGMS1-205ENST00000498514 DOK7Q18PE1 504 aa8.85□□□□□ -0.99
SGMS1-205ENST00000498514 HOXB1P14653 301 aaPredicted RBP8.84□□□□□ -0.99
SGMS1-205ENST00000498514 ERBB3P21860 1342 aa8.8□□□□□ -1
SGMS1-205ENST00000498514 RIMBP2O15034 1052 aa8.8□□□□□ -1
SGMS1-205ENST00000498514 SOX12O15370 315 aa8.79□□□□□ -1
SGMS1-205ENST00000498514 MICALL2Q8IY33 904 aa8.78□□□□□ -1
SGMS1-205ENST00000498514 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
SGMS1-205ENST00000498514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.74□□□□□ -1.01
SGMS1-205ENST00000498514 VGFO15240 615 aaPredicted RBP8.74□□□□□ -1.01
SGMS1-205ENST00000498514 TMEM92Q6UXU6 159 aa8.74□□□□□ -1.01
SGMS1-205ENST00000498514 ZFP91Q96JP5 570 aaPredicted RBP8.74□□□□□ -1.01
SGMS1-205ENST00000498514 ZSWIM6Q9HCJ5 1215 aa8.74□□□□□ -1.01
SGMS1-205ENST00000498514 VARS2Q5ST30 1063 aaKnown RBP8.73□□□□□ -1.01
SGMS1-205ENST00000498514 RNF25Q96BH1 459 aaPredicted RBP8.73□□□□□ -1.01
SGMS1-205ENST00000498514 MS4A4AQ96JQ5 239 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms