RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 RUSC2Q8N2Y8 1516 aa30.19■■■□□ 2.42
NECAB3-216ENST00000498353 PRG4Q92954 1404 aaPredicted RBP30.17■■■□□ 2.42
NECAB3-216ENST00000498353 KIAA0586Q9BVV6 1533 aa30.14■■■□□ 2.42
NECAB3-216ENST00000498353 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
NECAB3-216ENST00000498353 RAPGEF2Q9Y4G8 1499 aa29.95■■■□□ 2.39
NECAB3-216ENST00000498353 IQGAP2Q13576 1575 aa29.86■■■□□ 2.37
NECAB3-216ENST00000498353 CARMIL2Q6F5E8 1435 aa29.82■■■□□ 2.36
NECAB3-216ENST00000498353 PTPRGP23470 1445 aa29.78■■■□□ 2.36
NECAB3-216ENST00000498353 PRXQ9BXM0 1461 aa29.77■■■□□ 2.36
NECAB3-216ENST00000498353 NPM1P06748 294 aaKnown RBP eCLIP29.76■■■□□ 2.35
NECAB3-216ENST00000498353 TNIKQ9UKE5 1360 aa29.76■■■□□ 2.35
NECAB3-216ENST00000498353 ADCY10Q96PN6 1610 aa29.73■■■□□ 2.35
NECAB3-216ENST00000498353 UGGT2Q9NYU1 1516 aa29.72■■■□□ 2.35
NECAB3-216ENST00000498353 DISP1Q96F81 1524 aa29.71■■■□□ 2.35
NECAB3-216ENST00000498353 CSRNP3Q8WYN3 585 aa29.66■■■□□ 2.34
NECAB3-216ENST00000498353 TTBK1Q5TCY1 1321 aaPredicted RBP29.66■■■□□ 2.34
NECAB3-216ENST00000498353 MAPKBP1O60336 1514 aa29.66■■■□□ 2.34
NECAB3-216ENST00000498353 EEA1Q15075 1411 aa29.61■■■□□ 2.33
NECAB3-216ENST00000498353 CTTNBP2Q8WZ74 1663 aa29.6■■■□□ 2.33
NECAB3-216ENST00000498353 KIAA0556O60303 1618 aa29.59■■■□□ 2.33
NECAB3-216ENST00000498353 ABCC10Q5T3U5 1492 aa29.58■■■□□ 2.33
NECAB3-216ENST00000498353 UHRF1BP1LA0JNW5 1464 aa29.56■■■□□ 2.32
NECAB3-216ENST00000498353 UACAQ9BZF9 1416 aa29.56■■■□□ 2.32
NECAB3-216ENST00000498353 ABCC2Q92887 1545 aa29.55■■■□□ 2.32
NECAB3-216ENST00000498353 KIF13AQ9H1H9 1805 aa29.55■■■□□ 2.32
NECAB3-216ENST00000498353 FAM69CQ0P6D2 419 aa29.54■■■□□ 2.32
NECAB3-216ENST00000498353 GOLGA3Q08378 1498 aa29.52■■■□□ 2.32
NECAB3-216ENST00000498353 CHIC1Q5VXU3 224 aa29.49■■■□□ 2.31
NECAB3-216ENST00000498353 DIP2BQ9P265 1576 aa29.48■■■□□ 2.31
NECAB3-216ENST00000498353 FAM9AQ8IZU1 332 aaPredicted RBP29.43■■■□□ 2.3
NECAB3-216ENST00000498353 KDM5BQ9UGL1 1544 aa29.42■■■□□ 2.3
NECAB3-216ENST00000498353 ASXL2Q76L83 1435 aa29.4■■■□□ 2.3
NECAB3-216ENST00000498353 PLB1Q6P1J6 1458 aa29.39■■■□□ 2.3
NECAB3-216ENST00000498353 ABCA8O94911 1581 aa29.3■■■□□ 2.28
NECAB3-216ENST00000498353 P3H3Q8IVL6 736 aa29.29■■■□□ 2.28
NECAB3-216ENST00000498353 KIF21BO75037 1637 aa29.29■■■□□ 2.28
NECAB3-216ENST00000498353 ZCCHC11Q5TAX3 1644 aaKnown RBP29.29■■■□□ 2.28
NECAB3-216ENST00000498353 GLI2P10070 1586 aa29.27■■■□□ 2.28
NECAB3-216ENST00000498353 SAMD9Q5K651 1589 aa29.26■■■□□ 2.28
NECAB3-216ENST00000498353 EPRSP07814 1512 aaKnown RBP29.22■■■□□ 2.27
NECAB3-216ENST00000498353 WDR7Q9Y4E6 1490 aa29.17■■■□□ 2.26
NECAB3-216ENST00000498353 TSPOAP1O95153 1857 aa29.17■■■□□ 2.26
NECAB3-216ENST00000498353 RANGAP1P46060 587 aaPredicted RBP29.15■■■□□ 2.26
NECAB3-216ENST00000498353 KDM6BO15054 1643 aa29.1■■■□□ 2.25
NECAB3-216ENST00000498353 MAP3K4Q9Y6R4 1608 aa29.09■■■□□ 2.25
NECAB3-216ENST00000498353 UBTFP17480 764 aaKnown RBP29.09■■■□□ 2.25
NECAB3-216ENST00000498353 ATP10BO94823 1461 aa29.09■■■□□ 2.25
NECAB3-216ENST00000498353 PPRC1Q5VV67 1664 aaKnown RBP29.09■■■□□ 2.25
NECAB3-216ENST00000498353 FHOD3Q2V2M9 1422 aa29.08■■■□□ 2.25
NECAB3-216ENST00000498353 EFCAB5A4FU69 1503 aa29.07■■■□□ 2.24
NECAB3-216ENST00000498353 EHMT2Q96KQ7 1210 aa29.05■■■□□ 2.24
NECAB3-216ENST00000498353 KCNH8Q96L42 1107 aa29.05■■■□□ 2.24
NECAB3-216ENST00000498353 RAPGEF6Q8TEU7 1601 aa29.05■■■□□ 2.24
NECAB3-216ENST00000498353 ARID3CA6NKF2 412 aa29.04■■■□□ 2.24
NECAB3-216ENST00000498353 TEX14Q8IWB6 1497 aa29.01■■■□□ 2.23
NECAB3-216ENST00000498353 NUP153P49790 1475 aaKnown RBP28.97■■■□□ 2.23
NECAB3-216ENST00000498353 CD109Q6YHK3 1445 aa28.97■■■□□ 2.23
NECAB3-216ENST00000498353 CFAP43Q8NDM7 1665 aa28.94■■■□□ 2.22
NECAB3-216ENST00000498353 MAGI3Q5TCQ9 1506 aa28.94■■■□□ 2.22
NECAB3-216ENST00000498353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.93■■■□□ 2.22
NECAB3-216ENST00000498353 HNRNPUL2Q1KMD3 747 aaKnown RBP28.93■■■□□ 2.22
NECAB3-216ENST00000498353 COL17A1Q9UMD9 1497 aaPredicted RBP28.92■■■□□ 2.22
NECAB3-216ENST00000498353 AEBP2Q6ZN18 517 aaPredicted RBP28.9■■■□□ 2.22
NECAB3-216ENST00000498353 ARHGAP35Q9NRY4 1499 aa28.88■■■□□ 2.21
NECAB3-216ENST00000498353 FMN1Q68DA7 1419 aa28.84■■■□□ 2.21
NECAB3-216ENST00000498353 PLEKHD1A6NEE1 506 aa28.82■■■□□ 2.2
NECAB3-216ENST00000498353 ABCA9Q8IUA7 1624 aa28.82■■■□□ 2.2
NECAB3-216ENST00000498353 PHLDB1Q86UU1 1377 aa28.72■■■□□ 2.19
NECAB3-216ENST00000498353 CDK13Q14004 1512 aaKnown RBP28.7■■■□□ 2.19
NECAB3-216ENST00000498353 ARAP3Q8WWN8 1544 aa28.7■■■□□ 2.19
NECAB3-216ENST00000498353 ATP1B4Q9UN42 357 aaPredicted RBP28.7■■■□□ 2.18
NECAB3-216ENST00000498353 HECW1Q76N89 1606 aa28.69■■■□□ 2.18
NECAB3-216ENST00000498353 KDM4FA0A1W2PPD8 638 aa28.68■■■□□ 2.18
NECAB3-216ENST00000498353 NEO1Q92859 1461 aa28.66■■■□□ 2.18
NECAB3-216ENST00000498353 CDK11AQ9UQ88 783 aaPredicted RBP28.62■■■□□ 2.17
NECAB3-216ENST00000498353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.62■■■□□ 2.17
NECAB3-216ENST00000498353 CLIP1P30622 1438 aa28.58■■■□□ 2.17
NECAB3-216ENST00000498353 CASKIN1Q8WXD9 1431 aa28.56■■■□□ 2.16
NECAB3-216ENST00000498353 TTC37Q6PGP7 1564 aa28.55■■■□□ 2.16
NECAB3-216ENST00000498353 RAPGEF3O95398 923 aa28.54■■■□□ 2.16
NECAB3-216ENST00000498353 FANCAO15360 1455 aa28.52■■■□□ 2.16
NECAB3-216ENST00000498353 ADGRL1O94910 1474 aa28.52■■■□□ 2.16
NECAB3-216ENST00000498353 TROQ12816 1431 aaPredicted RBP28.51■■■□□ 2.15
NECAB3-216ENST00000498353 AKNAQ7Z591 1439 aa28.51■■■□□ 2.15
NECAB3-216ENST00000498353 PCF11O94913 1555 aaKnown RBP28.5■■■□□ 2.15
NECAB3-216ENST00000498353 PLCH2O75038 1416 aa28.49■■■□□ 2.15
NECAB3-216ENST00000498353 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
NECAB3-216ENST00000498353 CCDC18Q5T9S5 1454 aa28.47■■■□□ 2.15
NECAB3-216ENST00000498353 CFAP74Q9C0B2 1584 aa28.46■■■□□ 2.15
NECAB3-216ENST00000498353 DENND4BO75064 1496 aaPredicted RBP28.45■■■□□ 2.14
NECAB3-216ENST00000498353 FYCO1Q9BQS8 1478 aa28.45■■■□□ 2.14
NECAB3-216ENST00000498353 FRMPD1Q5SYB0 1578 aa28.44■■■□□ 2.14
NECAB3-216ENST00000498353 KIF14Q15058 1648 aa28.42■■■□□ 2.14
NECAB3-216ENST00000498353 EFCAB2Q5VUJ9 269 aa28.39■■■□□ 2.14
NECAB3-216ENST00000498353 RICTORQ6R327 1708 aa28.35■■■□□ 2.13
NECAB3-216ENST00000498353 MYO5CQ9NQX4 1742 aa28.35■■■□□ 2.13
NECAB3-216ENST00000498353 CEP162Q5TB80 1403 aa28.35■■■□□ 2.13
NECAB3-216ENST00000498353 SCAPERQ9BY12 1400 aa28.34■■■□□ 2.13
NECAB3-216ENST00000498353 ZMYM4Q5VZL5 1548 aa28.29■■■□□ 2.12
NECAB3-216ENST00000498353 POGZQ7Z3K3 1410 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms