RNA–Protein interactions for RNA: ENST00000498053.5

LRRFIP1-215, Transcript of LRR binding FLII interacting protein 1, human

TSL 3

Gene LRRFIP1, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRFIP1-215	ENST00000498053	PRX	Q9BXM0	1461 aa		29.59	■■■□□ 2.33
LRRFIP1-215	ENST00000498053	CSRNP3	Q8WYN3	585 aa		29.56	■■■□□ 2.32
LRRFIP1-215	ENST00000498053	SHROOM2	Q13796	1616 aa		29.53	■■■□□ 2.32
LRRFIP1-215	ENST00000498053	ERCC6L2	Q5T890	1561 aa		29.5	■■■□□ 2.31
LRRFIP1-215	ENST00000498053	KIAA0586	Q9BVV6	1533 aa		29.49	■■■□□ 2.31
LRRFIP1-215	ENST00000498053	CTTNBP2	Q8WZ74	1663 aa		29.45	■■■□□ 2.31
LRRFIP1-215	ENST00000498053	IQGAP2	Q13576	1575 aa		29.43	■■■□□ 2.3
LRRFIP1-215	ENST00000498053	ARAP1	Q96P48	1450 aa		29.42	■■■□□ 2.3
LRRFIP1-215	ENST00000498053	KIF21B	O75037	1637 aa		29.42	■■■□□ 2.3
LRRFIP1-215	ENST00000498053	PRG4	Q92954	1404 aa	Predicted RBP	29.37	■■■□□ 2.29
LRRFIP1-215	ENST00000498053	JPH4	Q96JJ6	628 aa		29.37	■■■□□ 2.29
LRRFIP1-215	ENST00000498053	EHMT2	Q96KQ7	1210 aa		29.32	■■■□□ 2.28
LRRFIP1-215	ENST00000498053	CYB5RL	Q6IPT4	315 aa		29.26	■■■□□ 2.27
LRRFIP1-215	ENST00000498053	UGGT2	Q9NYU1	1516 aa		29.24	■■■□□ 2.27
LRRFIP1-215	ENST00000498053	GOLGA3	Q08378	1498 aa		29.23	■■■□□ 2.27
LRRFIP1-215	ENST00000498053	DISP1	Q96F81	1524 aa		29.2	■■■□□ 2.27
LRRFIP1-215	ENST00000498053	KIAA0556	O60303	1618 aa		29.17	■■■□□ 2.26
LRRFIP1-215	ENST00000498053	CARMIL2	Q6F5E8	1435 aa		29.13	■■■□□ 2.25
LRRFIP1-215	ENST00000498053	UBTF	P17480	764 aa	Known RBP	29.09	■■■□□ 2.25
LRRFIP1-215	ENST00000498053	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.08	■■■□□ 2.25
LRRFIP1-215	ENST00000498053	RANGAP1	P46060	587 aa	Predicted RBP	29.06	■■■□□ 2.24
LRRFIP1-215	ENST00000498053	SAMD9	Q5K651	1589 aa		29.05	■■■□□ 2.24
LRRFIP1-215	ENST00000498053	TNIK	Q9UKE5	1360 aa		29.04	■■■□□ 2.24
LRRFIP1-215	ENST00000498053	PTPRG	P23470	1445 aa		29.01	■■■□□ 2.23
LRRFIP1-215	ENST00000498053	P3H3	Q8IVL6	736 aa		28.97	■■■□□ 2.23
LRRFIP1-215	ENST00000498053	ADCY10	Q96PN6	1610 aa		28.97	■■■□□ 2.23
LRRFIP1-215	ENST00000498053	EFCAB5	A4FU69	1503 aa		28.9	■■■□□ 2.22
LRRFIP1-215	ENST00000498053	FHOD3	Q2V2M9	1422 aa		28.9	■■■□□ 2.22
LRRFIP1-215	ENST00000498053	PLB1	Q6P1J6	1458 aa		28.85	■■■□□ 2.21
LRRFIP1-215	ENST00000498053	ARHGAP35	Q9NRY4	1499 aa		28.84	■■■□□ 2.21
LRRFIP1-215	ENST00000498053	UACA	Q9BZF9	1416 aa		28.83	■■■□□ 2.21
LRRFIP1-215	ENST00000498053	ABCC2	Q92887	1545 aa		28.83	■■■□□ 2.21
LRRFIP1-215	ENST00000498053	LOC105371045	A0A1W2PR82	267 aa		28.82	■■■□□ 2.2
LRRFIP1-215	ENST00000498053	ABCA8	O94911	1581 aa		28.8	■■■□□ 2.2
LRRFIP1-215	ENST00000498053	UHRF1BP1L	A0JNW5	1464 aa		28.78	■■■□□ 2.2
LRRFIP1-215	ENST00000498053	RAPGEF6	Q8TEU7	1601 aa		28.72	■■■□□ 2.19
LRRFIP1-215	ENST00000498053	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.71	■■■□□ 2.19
LRRFIP1-215	ENST00000498053	CLIP1	P30622	1438 aa		28.7	■■■□□ 2.19
LRRFIP1-215	ENST00000498053	KDM5B	Q9UGL1	1544 aa		28.67	■■■□□ 2.18
LRRFIP1-215	ENST00000498053	MAPKBP1	O60336	1514 aa		28.66	■■■□□ 2.18
LRRFIP1-215	ENST00000498053	NPM1	P06748	294 aa	Known RBP eCLIP	28.66	■■■□□ 2.18
LRRFIP1-215	ENST00000498053	CEP162	Q5TB80	1403 aa		28.66	■■■□□ 2.18
LRRFIP1-215	ENST00000498053	ARID3C	A6NKF2	412 aa		28.64	■■■□□ 2.18
LRRFIP1-215	ENST00000498053	NUP153	P49790	1475 aa	Known RBP	28.6	■■■□□ 2.17
LRRFIP1-215	ENST00000498053	TRH	P20396	242 aa	Predicted RBP	28.6	■■■□□ 2.17
LRRFIP1-215	ENST00000498053	FMN1	Q68DA7	1419 aa		28.59	■■■□□ 2.17
LRRFIP1-215	ENST00000498053	KIF13A	Q9H1H9	1805 aa		28.57	■■■□□ 2.16
LRRFIP1-215	ENST00000498053	ASXL2	Q76L83	1435 aa		28.56	■■■□□ 2.16
LRRFIP1-215	ENST00000498053	PCF11	O94913	1555 aa	Known RBP	28.55	■■■□□ 2.16
LRRFIP1-215	ENST00000498053	ATP10B	O94823	1461 aa		28.54	■■■□□ 2.16
LRRFIP1-215	ENST00000498053	DIP2B	Q9P265	1576 aa		28.54	■■■□□ 2.16
LRRFIP1-215	ENST00000498053	HECW1	Q76N89	1606 aa		28.52	■■■□□ 2.16
LRRFIP1-215	ENST00000498053	LRRIQ1	Q96JM4	1722 aa		28.5	■■■□□ 2.15
LRRFIP1-215	ENST00000498053	ABCC10	Q5T3U5	1492 aa		28.49	■■■□□ 2.15
LRRFIP1-215	ENST00000498053	CDK13	Q14004	1512 aa	Known RBP	28.48	■■■□□ 2.15
LRRFIP1-215	ENST00000498053	WDR7	Q9Y4E6	1490 aa		28.46	■■■□□ 2.15
LRRFIP1-215	ENST00000498053	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.45	■■■□□ 2.14
LRRFIP1-215	ENST00000498053	CASKIN1	Q8WXD9	1431 aa		28.42	■■■□□ 2.14
LRRFIP1-215	ENST00000498053	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.41	■■■□□ 2.14
LRRFIP1-215	ENST00000498053	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.41	■■■□□ 2.14
LRRFIP1-215	ENST00000498053	EPRS	P07814	1512 aa	Known RBP	28.41	■■■□□ 2.14
LRRFIP1-215	ENST00000498053	FAM69C	Q0P6D2	419 aa		28.4	■■■□□ 2.14
LRRFIP1-215	ENST00000498053	FYCO1	Q9BQS8	1478 aa		28.38	■■■□□ 2.13
LRRFIP1-215	ENST00000498053	TSPOAP1	O95153	1857 aa		28.35	■■■□□ 2.13
LRRFIP1-215	ENST00000498053	GLI2	P10070	1586 aa		28.34	■■■□□ 2.13
LRRFIP1-215	ENST00000498053	KCNH8	Q96L42	1107 aa		28.31	■■■□□ 2.12
LRRFIP1-215	ENST00000498053	MAP3K4	Q9Y6R4	1608 aa		28.29	■■■□□ 2.12
LRRFIP1-215	ENST00000498053	CCDC18	Q5T9S5	1454 aa		28.27	■■■□□ 2.12
LRRFIP1-215	ENST00000498053	VPS8	Q8N3P4	1428 aa		28.27	■■■□□ 2.12
LRRFIP1-215	ENST00000498053	PPRC1	Q5VV67	1664 aa	Known RBP	28.26	■■■□□ 2.12
LRRFIP1-215	ENST00000498053	MAGI3	Q5TCQ9	1506 aa		28.23	■■■□□ 2.11
LRRFIP1-215	ENST00000498053	CFAP43	Q8NDM7	1665 aa		28.23	■■■□□ 2.11
LRRFIP1-215	ENST00000498053	PLEKHD1	A6NEE1	506 aa		28.22	■■■□□ 2.11
LRRFIP1-215	ENST00000498053	ABCA9	Q8IUA7	1624 aa		28.21	■■■□□ 2.11
LRRFIP1-215	ENST00000498053	KIF14	Q15058	1648 aa		28.19	■■■□□ 2.1
LRRFIP1-215	ENST00000498053	TTC37	Q6PGP7	1564 aa		28.17	■■■□□ 2.1
LRRFIP1-215	ENST00000498053	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.15	■■■□□ 2.1
LRRFIP1-215	ENST00000498053	TRO	Q12816	1431 aa	Predicted RBP	28.15	■■■□□ 2.1
LRRFIP1-215	ENST00000498053	CD109	Q6YHK3	1445 aa		28.13	■■■□□ 2.09
LRRFIP1-215	ENST00000498053	CDK11A	Q9UQ88	783 aa	Predicted RBP	28.12	■■■□□ 2.09
LRRFIP1-215	ENST00000498053	TIAM1	Q13009	1591 aa		28.09	■■■□□ 2.09
LRRFIP1-215	ENST00000498053	TEX14	Q8IWB6	1497 aa		28.03	■■■□□ 2.08
LRRFIP1-215	ENST00000498053	EHBP1L1	Q8N3D4	1523 aa		28.02	■■■□□ 2.08
LRRFIP1-215	ENST00000498053	MYO5C	Q9NQX4	1742 aa		28.02	■■■□□ 2.08
LRRFIP1-215	ENST00000498053	MTUS2	Q5JR59	1369 aa		28	■■■□□ 2.07
LRRFIP1-215	ENST00000498053	KDM6B	O15054	1643 aa		28	■■■□□ 2.07
LRRFIP1-215	ENST00000498053	MAP3K1	Q13233	1512 aa		27.94	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	CDC42BPA	Q5VT25	1732 aa		27.94	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	LRRC9	Q6ZRR7	1453 aa		27.93	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	COL17A1	Q9UMD9	1497 aa	Predicted RBP	27.93	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	CDC42BPB	Q9Y5S2	1711 aa		27.92	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	PREX2	Q70Z35	1606 aa		27.92	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	PLCH2	O75038	1416 aa		27.91	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	FANCA	O15360	1455 aa		27.9	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	KANK4	Q5T7N3	995 aa	Predicted RBP	27.9	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	SUPT6H	Q7KZ85	1726 aa	Known RBP	27.89	■■■□□ 2.06
LRRFIP1-215	ENST00000498053	CFAP74	Q9C0B2	1584 aa		27.89	■■■□□ 2.05
LRRFIP1-215	ENST00000498053	NEO1	Q92859	1461 aa		27.88	■■■□□ 2.05
LRRFIP1-215	ENST00000498053	ARHGAP5	Q13017	1502 aa		27.87	■■■□□ 2.05
LRRFIP1-215	ENST00000498053	ARAP3	Q8WWN8	1544 aa		27.86	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms