RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 CEP162Q5TB80 1403 aa25.76■■□□□ 1.71
PTK7-220ENST00000497957 CTTNBP2Q8WZ74 1663 aa25.76■■□□□ 1.71
PTK7-220ENST00000497957 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
PTK7-220ENST00000497957 NUP160Q12769 1436 aa25.68■■□□□ 1.7
PTK7-220ENST00000497957 CLIP1P30622 1438 aa25.65■■□□□ 1.7
PTK7-220ENST00000497957 IQGAP2Q13576 1575 aa25.61■■□□□ 1.69
PTK7-220ENST00000497957 KIAA0586Q9BVV6 1533 aa25.61■■□□□ 1.69
PTK7-220ENST00000497957 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
PTK7-220ENST00000497957 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
PTK7-220ENST00000497957 P3H3Q8IVL6 736 aa25.55■■□□□ 1.68
PTK7-220ENST00000497957 CLASP1Q7Z460 1538 aa25.49■■□□□ 1.67
PTK7-220ENST00000497957 SAMD9Q5K651 1589 aa25.48■■□□□ 1.67
PTK7-220ENST00000497957 UGGT2Q9NYU1 1516 aa25.48■■□□□ 1.67
PTK7-220ENST00000497957 FHOD3Q2V2M9 1422 aa25.47■■□□□ 1.67
PTK7-220ENST00000497957 DISP1Q96F81 1524 aa25.44■■□□□ 1.66
PTK7-220ENST00000497957 JPH4Q96JJ6 628 aa25.44■■□□□ 1.66
PTK7-220ENST00000497957 EFCAB5A4FU69 1503 aa25.42■■□□□ 1.66
PTK7-220ENST00000497957 KIAA0556O60303 1618 aa25.39■■□□□ 1.66
PTK7-220ENST00000497957 SHROOM2Q13796 1616 aa25.39■■□□□ 1.66
PTK7-220ENST00000497957 ERCC6L2Q5T890 1561 aa25.39■■□□□ 1.65
PTK7-220ENST00000497957 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
PTK7-220ENST00000497957 VPS8Q8N3P4 1428 aa25.35■■□□□ 1.65
PTK7-220ENST00000497957 PRG4Q92954 1404 aaPredicted RBP25.35■■□□□ 1.65
PTK7-220ENST00000497957 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
PTK7-220ENST00000497957 PCF11O94913 1555 aaKnown RBP25.26■■□□□ 1.63
PTK7-220ENST00000497957 CARMIL2Q6F5E8 1435 aa25.24■■□□□ 1.63
PTK7-220ENST00000497957 PPARGC1BQ86YN6 1023 aaKnown RBP25.2■■□□□ 1.62
PTK7-220ENST00000497957 FMN1Q68DA7 1419 aa25.17■■□□□ 1.62
PTK7-220ENST00000497957 ATP1B4Q9UN42 357 aaPredicted RBP25.14■■□□□ 1.62
PTK7-220ENST00000497957 CASKIN1Q8WXD9 1431 aa25.13■■□□□ 1.61
PTK7-220ENST00000497957 PLB1Q6P1J6 1458 aa25.13■■□□□ 1.61
PTK7-220ENST00000497957 LRRIQ1Q96JM4 1722 aa25.12■■□□□ 1.61
PTK7-220ENST00000497957 PTPRGP23470 1445 aa25.11■■□□□ 1.61
PTK7-220ENST00000497957 FYCO1Q9BQS8 1478 aa25.09■■□□□ 1.61
PTK7-220ENST00000497957 ARID3CA6NKF2 412 aa25.08■■□□□ 1.61
PTK7-220ENST00000497957 RAPGEF6Q8TEU7 1601 aa25.08■■□□□ 1.6
PTK7-220ENST00000497957 ABCA8O94911 1581 aa25.06■■□□□ 1.6
PTK7-220ENST00000497957 NUP153P49790 1475 aaKnown RBP25.03■■□□□ 1.6
PTK7-220ENST00000497957 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
PTK7-220ENST00000497957 HECW1Q76N89 1606 aa25.02■■□□□ 1.6
PTK7-220ENST00000497957 KANK4Q5T7N3 995 aaPredicted RBP25.02■■□□□ 1.6
PTK7-220ENST00000497957 CDK13Q14004 1512 aaKnown RBP25.02■■□□□ 1.6
PTK7-220ENST00000497957 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
PTK7-220ENST00000497957 CFAP43Q8NDM7 1665 aa25■■□□□ 1.59
PTK7-220ENST00000497957 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
PTK7-220ENST00000497957 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
PTK7-220ENST00000497957 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
PTK7-220ENST00000497957 EPRSP07814 1512 aaKnown RBP24.96■■□□□ 1.59
PTK7-220ENST00000497957 UACAQ9BZF9 1416 aa24.96■■□□□ 1.59
PTK7-220ENST00000497957 APLP2Q06481 763 aa24.95■■□□□ 1.58
PTK7-220ENST00000497957 MAGI3Q5TCQ9 1506 aa24.92■■□□□ 1.58
PTK7-220ENST00000497957 MAP3K1Q13233 1512 aa24.91■■□□□ 1.58
PTK7-220ENST00000497957 ABCC2Q92887 1545 aa24.91■■□□□ 1.58
PTK7-220ENST00000497957 ADCY10Q96PN6 1610 aa24.89■■□□□ 1.57
PTK7-220ENST00000497957 ATP10BO94823 1461 aa24.89■■□□□ 1.57
PTK7-220ENST00000497957 CCDC18Q5T9S5 1454 aa24.88■■□□□ 1.57
PTK7-220ENST00000497957 LRRC9Q6ZRR7 1453 aa24.88■■□□□ 1.57
PTK7-220ENST00000497957 UHRF1BP1LA0JNW5 1464 aa24.84■■□□□ 1.57
PTK7-220ENST00000497957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.57
PTK7-220ENST00000497957 HNRNPUL2Q1KMD3 747 aaKnown RBP24.83■■□□□ 1.57
PTK7-220ENST00000497957 ZCCHC11Q5TAX3 1644 aaKnown RBP24.79■■□□□ 1.56
PTK7-220ENST00000497957 CYB5RLQ6IPT4 315 aa24.79■■□□□ 1.56
PTK7-220ENST00000497957 MTUS2Q5JR59 1369 aa24.77■■□□□ 1.56
PTK7-220ENST00000497957 KDM5BQ9UGL1 1544 aa24.76■■□□□ 1.55
PTK7-220ENST00000497957 EHBP1L1Q8N3D4 1523 aa24.75■■□□□ 1.55
PTK7-220ENST00000497957 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
PTK7-220ENST00000497957 PHLDB1Q86UU1 1377 aa24.69■■□□□ 1.54
PTK7-220ENST00000497957 KIF14Q15058 1648 aa24.69■■□□□ 1.54
PTK7-220ENST00000497957 NCOA2Q15596 1464 aa24.67■■□□□ 1.54
PTK7-220ENST00000497957 SUPT6HQ7KZ85 1726 aaKnown RBP24.66■■□□□ 1.54
PTK7-220ENST00000497957 PLEKHD1A6NEE1 506 aa24.64■■□□□ 1.54
PTK7-220ENST00000497957 CDK11AQ9UQ88 783 aaPredicted RBP24.63■■□□□ 1.53
PTK7-220ENST00000497957 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
PTK7-220ENST00000497957 ASXL2Q76L83 1435 aa24.58■■□□□ 1.53
PTK7-220ENST00000497957 KCNH8Q96L42 1107 aa24.57■■□□□ 1.52
PTK7-220ENST00000497957 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
PTK7-220ENST00000497957 PCGF6Q9BYE7 350 aa24.56■■□□□ 1.52
PTK7-220ENST00000497957 ABCC10Q5T3U5 1492 aa24.56■■□□□ 1.52
PTK7-220ENST00000497957 WDR7Q9Y4E6 1490 aa24.54■■□□□ 1.52
PTK7-220ENST00000497957 NPM1P06748 294 aaKnown RBP eCLIP24.54■■□□□ 1.52
PTK7-220ENST00000497957 TTC37Q6PGP7 1564 aa24.52■■□□□ 1.52
PTK7-220ENST00000497957 MYOM3Q5VTT5 1437 aa24.52■■□□□ 1.52
PTK7-220ENST00000497957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.51■■□□□ 1.51
PTK7-220ENST00000497957 RRBP1Q9P2E9 1410 aaKnown RBP24.51■■□□□ 1.51
PTK7-220ENST00000497957 FGD6Q6ZV73 1430 aa24.48■■□□□ 1.51
PTK7-220ENST00000497957 CCNB3Q8WWL7 1395 aa24.48■■□□□ 1.51
PTK7-220ENST00000497957 GPATCH8Q9UKJ3 1502 aaKnown RBP24.47■■□□□ 1.51
PTK7-220ENST00000497957 CDC42BPAQ5VT25 1732 aa24.47■■□□□ 1.51
PTK7-220ENST00000497957 MAPKBP1O60336 1514 aa24.44■■□□□ 1.5
PTK7-220ENST00000497957 PTPN23Q9H3S7 1636 aa24.42■■□□□ 1.5
PTK7-220ENST00000497957 ZNF644Q9H582 1327 aaPredicted RBP24.41■■□□□ 1.5
PTK7-220ENST00000497957 FAM50AQ14320 339 aaKnown RBP24.41■■□□□ 1.5
PTK7-220ENST00000497957 CDC42BPBQ9Y5S2 1711 aa24.39■■□□□ 1.5
PTK7-220ENST00000497957 ITSN2Q9NZM3 1697 aa24.39■■□□□ 1.49
PTK7-220ENST00000497957 PREX2Q70Z35 1606 aa24.38■■□□□ 1.49
PTK7-220ENST00000497957 ABCA9Q8IUA7 1624 aa24.37■■□□□ 1.49
PTK7-220ENST00000497957 TCOF1Q13428 1488 aaKnown RBP24.36■■□□□ 1.49
PTK7-220ENST00000497957 MIA2Q96PC5 1412 aa24.35■■□□□ 1.49
PTK7-220ENST00000497957 ITGAEP38570 1179 aa24.35■■□□□ 1.49
PTK7-220ENST00000497957 CFDP1Q9UEE9 299 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms