RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
SNRNP200-208ENST00000497539 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
SNRNP200-208ENST00000497539 ZEB1P37275 1124 aaPredicted RBP17.69■□□□□ 0.42
SNRNP200-208ENST00000497539 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
SNRNP200-208ENST00000497539 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
SNRNP200-208ENST00000497539 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
SNRNP200-208ENST00000497539 TDRD9Q8NDG6 1382 aaKnown RBP17.63■□□□□ 0.41
SNRNP200-208ENST00000497539 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.417e-7■■■■■ 31.7
SNRNP200-208ENST00000497539 CFAP43Q8NDM7 1665 aa17.61■□□□□ 0.41
SNRNP200-208ENST00000497539 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
SNRNP200-208ENST00000497539 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
SNRNP200-208ENST00000497539 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
SNRNP200-208ENST00000497539 TIAM1Q13009 1591 aa17.59■□□□□ 0.41
SNRNP200-208ENST00000497539 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
SNRNP200-208ENST00000497539 FYCO1Q9BQS8 1478 aa17.55■□□□□ 0.4
SNRNP200-208ENST00000497539 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
SNRNP200-208ENST00000497539 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
SNRNP200-208ENST00000497539 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
SNRNP200-208ENST00000497539 CASKIN1Q8WXD9 1431 aa17.51■□□□□ 0.39
SNRNP200-208ENST00000497539 RRBP1Q9P2E9 1410 aaKnown RBP17.51■□□□□ 0.39
SNRNP200-208ENST00000497539 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
SNRNP200-208ENST00000497539 ZNF608Q9ULD9 1512 aaPredicted RBP17.49■□□□□ 0.39
SNRNP200-208ENST00000497539 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
SNRNP200-208ENST00000497539 IQGAP2Q13576 1575 aa17.48■□□□□ 0.39
SNRNP200-208ENST00000497539 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
SNRNP200-208ENST00000497539 LRRC9Q6ZRR7 1453 aa17.46■□□□□ 0.39
SNRNP200-208ENST00000497539 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
SNRNP200-208ENST00000497539 FHOD3Q2V2M9 1422 aa17.46■□□□□ 0.38
SNRNP200-208ENST00000497539 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
SNRNP200-208ENST00000497539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
SNRNP200-208ENST00000497539 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
SNRNP200-208ENST00000497539 GRIN2AQ12879 1464 aa17.39■□□□□ 0.38
SNRNP200-208ENST00000497539 LRRIQ1Q96JM4 1722 aa17.39■□□□□ 0.37
SNRNP200-208ENST00000497539 KIAA0586Q9BVV6 1533 aa17.38■□□□□ 0.37
SNRNP200-208ENST00000497539 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
SNRNP200-208ENST00000497539 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
SNRNP200-208ENST00000497539 CCNB3Q8WWL7 1395 aa17.33■□□□□ 0.37
SNRNP200-208ENST00000497539 HECW1Q76N89 1606 aa17.33■□□□□ 0.36
SNRNP200-208ENST00000497539 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
SNRNP200-208ENST00000497539 KIAA0556O60303 1618 aa17.32■□□□□ 0.36
SNRNP200-208ENST00000497539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNRNP200-208ENST00000497539 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
SNRNP200-208ENST00000497539 CEP170Q5SW79 1584 aa17.29■□□□□ 0.36
SNRNP200-208ENST00000497539 NUP160Q12769 1436 aa17.29■□□□□ 0.36
SNRNP200-208ENST00000497539 EHBP1L1Q8N3D4 1523 aa17.29■□□□□ 0.36
SNRNP200-208ENST00000497539 DISP1Q96F81 1524 aa17.28■□□□□ 0.36
SNRNP200-208ENST00000497539 ARHGEF11O15085 1522 aa17.26■□□□□ 0.35
SNRNP200-208ENST00000497539 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
SNRNP200-208ENST00000497539 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
SNRNP200-208ENST00000497539 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
SNRNP200-208ENST00000497539 SUPT6HQ7KZ85 1726 aaKnown RBP17.24■□□□□ 0.35
SNRNP200-208ENST00000497539 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
SNRNP200-208ENST00000497539 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
SNRNP200-208ENST00000497539 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
SNRNP200-208ENST00000497539 RAPGEF6Q8TEU7 1601 aa17.18■□□□□ 0.34
SNRNP200-208ENST00000497539 DIEXFQ68CQ4 756 aaKnown RBP17.18■□□□□ 0.34
SNRNP200-208ENST00000497539 MAGI3Q5TCQ9 1506 aa17.18■□□□□ 0.34
SNRNP200-208ENST00000497539 GTF3C3Q9Y5Q9 886 aa17.17■□□□□ 0.34
SNRNP200-208ENST00000497539 NCOA2Q15596 1464 aa17.16■□□□□ 0.34
SNRNP200-208ENST00000497539 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
SNRNP200-208ENST00000497539 MTUS2Q5JR59 1369 aa17.14■□□□□ 0.33
SNRNP200-208ENST00000497539 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
SNRNP200-208ENST00000497539 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
SNRNP200-208ENST00000497539 DHX57Q6P158 1386 aaKnown RBP17.12■□□□□ 0.33
SNRNP200-208ENST00000497539 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
SNRNP200-208ENST00000497539 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
SNRNP200-208ENST00000497539 CHD1O14646 1710 aa17.1■□□□□ 0.33
SNRNP200-208ENST00000497539 SHROOM2Q13796 1616 aa17.09■□□□□ 0.33
SNRNP200-208ENST00000497539 CARMIL2Q6F5E8 1435 aa17.09■□□□□ 0.33
SNRNP200-208ENST00000497539 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
SNRNP200-208ENST00000497539 ADCY10Q96PN6 1610 aa17.08■□□□□ 0.32
SNRNP200-208ENST00000497539 PTPN23Q9H3S7 1636 aa17.08■□□□□ 0.32
SNRNP200-208ENST00000497539 SETD5Q9C0A6 1442 aa17.07■□□□□ 0.32
SNRNP200-208ENST00000497539 ABCA8O94911 1581 aa17.07■□□□□ 0.32
SNRNP200-208ENST00000497539 MIA2Q96PC5 1412 aa17.06■□□□□ 0.32
SNRNP200-208ENST00000497539 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
SNRNP200-208ENST00000497539 CENPBP07199 599 aaPredicted RBP17.04■□□□□ 0.32
SNRNP200-208ENST00000497539 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.32
SNRNP200-208ENST00000497539 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
SNRNP200-208ENST00000497539 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
SNRNP200-208ENST00000497539 GCC2Q8IWJ2 1684 aa16.99■□□□□ 0.31
SNRNP200-208ENST00000497539 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
SNRNP200-208ENST00000497539 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
SNRNP200-208ENST00000497539 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
SNRNP200-208ENST00000497539 ITSN2Q9NZM3 1697 aa16.98■□□□□ 0.31
SNRNP200-208ENST00000497539 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
SNRNP200-208ENST00000497539 TROQ12816 1431 aaPredicted RBP16.96■□□□□ 0.31
SNRNP200-208ENST00000497539 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.31
SNRNP200-208ENST00000497539 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.3
SNRNP200-208ENST00000497539 FAM50AQ14320 339 aaKnown RBP16.95■□□□□ 0.3
SNRNP200-208ENST00000497539 PTPRKQ15262 1439 aa16.95■□□□□ 0.3
SNRNP200-208ENST00000497539 DNMT1P26358 1616 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-208ENST00000497539 PRG4Q92954 1404 aaPredicted RBP16.92■□□□□ 0.3
SNRNP200-208ENST00000497539 FBLN2P98095 1184 aa16.92■□□□□ 0.3
SNRNP200-208ENST00000497539 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
SNRNP200-208ENST00000497539 NAIPQ13075 1403 aa16.9■□□□□ 0.3
SNRNP200-208ENST00000497539 ZNF316A6NFI3 1004 aaPredicted RBP16.89■□□□□ 0.29
SNRNP200-208ENST00000497539 ITGAEP38570 1179 aa16.88■□□□□ 0.29
SNRNP200-208ENST00000497539 KIF14Q15058 1648 aa16.87■□□□□ 0.29
SNRNP200-208ENST00000497539 ATP10BO94823 1461 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms