RNA–Protein interactions for RNA: ENST00000497268.1

ZEB2-223, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 3

Gene ZEB2, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-223ENST00000497268 C7P10643 843 aa15.47■□□□□ 0.07
ZEB2-223ENST00000497268 POTEMA6NI47 508 aa15.45■□□□□ 0.06
ZEB2-223ENST00000497268 ATMINO43313 823 aaPredicted RBP15.45■□□□□ 0.06
ZEB2-223ENST00000497268 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
ZEB2-223ENST00000497268 MAMSTRQ6ZN01 415 aa15.4■□□□□ 0.06
ZEB2-223ENST00000497268 POTEGQ6S5H5 508 aa15.39■□□□□ 0.05
ZEB2-223ENST00000497268 PLEKHG5O94827 1062 aa15.34■□□□□ 0.05
ZEB2-223ENST00000497268 PROM2Q8N271 834 aa15.34■□□□□ 0.05
ZEB2-223ENST00000497268 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
ZEB2-223ENST00000497268 PCDH10Q9P2E7 1040 aa15.3■□□□□ 0.04
ZEB2-223ENST00000497268 POTEJP0CG39 1038 aa15.29■□□□□ 0.04
ZEB2-223ENST00000497268 ATN1P54259 1190 aaPredicted RBP15.29■□□□□ 0.04
ZEB2-223ENST00000497268 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
ZEB2-223ENST00000497268 SCUBE2Q9NQ36 999 aa15.29■□□□□ 0.04
ZEB2-223ENST00000497268 MIER1Q8N108 512 aa15.23■□□□□ 0.03
ZEB2-223ENST00000497268 BMP2KQ9NSY1 1161 aaPredicted RBP15.2■□□□□ 0.02
ZEB2-223ENST00000497268 TIE1P35590 1138 aa15.18■□□□□ 0.02
ZEB2-223ENST00000497268 FAM163AQ96GL9 167 aaPredicted RBP15.18■□□□□ 0.02
ZEB2-223ENST00000497268 MAP3K13O43283 966 aa15.17■□□□□ 0.02
ZEB2-223ENST00000497268 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
ZEB2-223ENST00000497268 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
ZEB2-223ENST00000497268 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
ZEB2-223ENST00000497268 SEC24BO95487 1268 aa15.1■□□□□ 0.01
ZEB2-223ENST00000497268 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
ZEB2-223ENST00000497268 LCE2DQ5TA82 110 aaPredicted RBP15.06■□□□□ 0
ZEB2-223ENST00000497268 TTLL13PA6NNM8 815 aa15.05■□□□□ -0
ZEB2-223ENST00000497268 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
ZEB2-223ENST00000497268 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
ZEB2-223ENST00000497268 IER5LQ5T953 404 aa15□□□□□ -0.01
ZEB2-223ENST00000497268 COLQQ9Y215 455 aaPredicted RBP15□□□□□ -0.01
ZEB2-223ENST00000497268 PCDHB13Q9Y5F0 798 aa15□□□□□ -0.01
ZEB2-223ENST00000497268 TRIM35Q9UPQ4 493 aa14.98□□□□□ -0.01
ZEB2-223ENST00000497268 NUBP1P53384 320 aa14.89□□□□□ -0.03
ZEB2-223ENST00000497268 FAM212AQ96EL1 285 aa14.88□□□□□ -0.03
ZEB2-223ENST00000497268 IFNL1Q8IU54 200 aa14.86□□□□□ -0.03
ZEB2-223ENST00000497268 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
ZEB2-223ENST00000497268 SLAIN1Q8ND83 568 aa14.84□□□□□ -0.03
ZEB2-223ENST00000497268 PLCG2P16885 1265 aa14.83□□□□□ -0.04
ZEB2-223ENST00000497268 CDAN1Q8IWY9 1227 aa14.83□□□□□ -0.04
ZEB2-223ENST00000497268 ST18O60284 1047 aa14.74□□□□□ -0.05
ZEB2-223ENST00000497268 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.05
ZEB2-223ENST00000497268 DCAF8Q5TAQ9 597 aa14.7□□□□□ -0.06
ZEB2-223ENST00000497268 OCEL1Q9H607 264 aa14.69□□□□□ -0.06
ZEB2-223ENST00000497268 PYGBP11216 843 aa14.64□□□□□ -0.07
ZEB2-223ENST00000497268 FKBP8Q14318 412 aa14.64□□□□□ -0.07
ZEB2-223ENST00000497268 SNPHO15079 494 aa14.63□□□□□ -0.07
ZEB2-223ENST00000497268 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.62□□□□□ -0.07
ZEB2-223ENST00000497268 TMEM121BQ9BXQ6 578 aaPredicted RBP14.61□□□□□ -0.07
ZEB2-223ENST00000497268 PCDHB8Q9UN66 801 aa14.57□□□□□ -0.08
ZEB2-223ENST00000497268 FBXO3Q9UK99 471 aa14.55□□□□□ -0.08
ZEB2-223ENST00000497268 GOLGA2Q08379 1002 aa14.5□□□□□ -0.09
ZEB2-223ENST00000497268 GSE1Q14687 1217 aa14.47□□□□□ -0.09
ZEB2-223ENST00000497268 ZNF467Q7Z7K2 595 aaPredicted RBP14.47□□□□□ -0.09
ZEB2-223ENST00000497268 SPNS2Q8IVW8 549 aa14.47□□□□□ -0.09
ZEB2-223ENST00000497268 MKRN3Q13064 507 aaKnown RBP14.46□□□□□ -0.09
ZEB2-223ENST00000497268 MMRN1Q13201 1228 aa14.46□□□□□ -0.09
ZEB2-223ENST00000497268 C3orf67Q6ZVT6 689 aa14.46□□□□□ -0.09
ZEB2-223ENST00000497268 MARVELD3Q96A59 401 aa14.45□□□□□ -0.1
ZEB2-223ENST00000497268 L3MBTL3Q96JM7 780 aaPredicted RBP14.45□□□□□ -0.1
ZEB2-223ENST00000497268 KLHL34Q8N239 644 aa14.44□□□□□ -0.1
ZEB2-223ENST00000497268 PDCD7Q8N8D1 485 aaKnown RBP14.41□□□□□ -0.1
ZEB2-223ENST00000497268 EMP3P54852 163 aa14.36□□□□□ -0.11
ZEB2-223ENST00000497268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.36□□□□□ -0.11
ZEB2-223ENST00000497268 CHRM1P11229 460 aaPredicted RBP14.35□□□□□ -0.11
ZEB2-223ENST00000497268 PSEN1P49768 467 aa14.33□□□□□ -0.12
ZEB2-223ENST00000497268 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
ZEB2-223ENST00000497268 HS3ST6Q96QI5 342 aa14.25□□□□□ -0.13
ZEB2-223ENST00000497268 FAM205CA6NFA0 338 aa14.24□□□□□ -0.13
ZEB2-223ENST00000497268 G3V3G9 751 aa14.24□□□□□ -0.13
ZEB2-223ENST00000497268 PDAP1Q13442 181 aaKnown RBP14.23□□□□□ -0.13
ZEB2-223ENST00000497268 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
ZEB2-223ENST00000497268 KRTAP3-3Q9BYR6 98 aa14.17□□□□□ -0.14
ZEB2-223ENST00000497268 KRTAP3-2Q9BYR7 98 aa14.17□□□□□ -0.14
ZEB2-223ENST00000497268 POTEB3A0JP26 581 aa14.16□□□□□ -0.14
ZEB2-223ENST00000497268 DPY19L2Q6NUT2 758 aa14.16□□□□□ -0.14
ZEB2-223ENST00000497268 POTEBQ6S5H4 581 aa14.16□□□□□ -0.14
ZEB2-223ENST00000497268 CABP2Q9NPB3 220 aa14.15□□□□□ -0.14
ZEB2-223ENST00000497268 BOLA1Q9Y3E2 137 aa14.15□□□□□ -0.14
ZEB2-223ENST00000497268 CIZ1Q9ULV3 898 aaPredicted RBP14.12□□□□□ -0.15
ZEB2-223ENST00000497268 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
ZEB2-223ENST00000497268 ZNF710Q8N1W2 664 aa14.1□□□□□ -0.15
ZEB2-223ENST00000497268 HOXB3P14651 431 aaPredicted RBP14.06□□□□□ -0.16
ZEB2-223ENST00000497268 DOK7Q18PE1 504 aa14.06□□□□□ -0.16
ZEB2-223ENST00000497268 HOXB1P14653 301 aaPredicted RBP14.04□□□□□ -0.16
ZEB2-223ENST00000497268 ERBB3P21860 1342 aa14.02□□□□□ -0.17
ZEB2-223ENST00000497268 RIMBP2O15034 1052 aa14□□□□□ -0.17
ZEB2-223ENST00000497268 IFNLR1Q8IU57 520 aaPredicted RBP13.99□□□□□ -0.17
ZEB2-223ENST00000497268 EFCAB3Q8N7B9 438 aa13.92□□□□□ -0.18
ZEB2-223ENST00000497268 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
ZEB2-223ENST00000497268 RNF166Q96A37 237 aaPredicted RBP13.89□□□□□ -0.19
ZEB2-223ENST00000497268 VARS2Q5ST30 1063 aaKnown RBP13.88□□□□□ -0.19
ZEB2-223ENST00000497268 ZSWIM6Q9HCJ5 1215 aa13.87□□□□□ -0.19
ZEB2-223ENST00000497268 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
ZEB2-223ENST00000497268 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
ZEB2-223ENST00000497268 SOX12O15370 315 aa13.81□□□□□ -0.2
ZEB2-223ENST00000497268 ZNF687Q8N1G0 1237 aa13.81□□□□□ -0.2
ZEB2-223ENST00000497268 TMEM92Q6UXU6 159 aa13.77□□□□□ -0.21
ZEB2-223ENST00000497268 PTGER2P43116 358 aa13.75□□□□□ -0.21
ZEB2-223ENST00000497268 GPR153Q6NV75 609 aa13.75□□□□□ -0.21
ZEB2-223ENST00000497268 RIOK3O14730 519 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms