RNA–Protein interactions for RNA: ENST00000497244.1

CASS4-203, Transcript of Cas scaffold protein family member 4, humanhuman

TSL 1 (best)

Gene CASS4, Length 2,871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASS4-203ENST00000497244 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
CASS4-203ENST00000497244 FKBP8Q14318 412 aa12.9□□□□□ -0.34
CASS4-203ENST00000497244 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
CASS4-203ENST00000497244 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
CASS4-203ENST00000497244 SOGA1O94964 1423 aa12.88□□□□□ -0.35
CASS4-203ENST00000497244 CDK11BP21127 795 aaKnown RBP12.88□□□□□ -0.35
CASS4-203ENST00000497244 CDK11AQ9UQ88 783 aaPredicted RBP12.88□□□□□ -0.35
CASS4-203ENST00000497244 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
CASS4-203ENST00000497244 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
CASS4-203ENST00000497244 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
CASS4-203ENST00000497244 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
CASS4-203ENST00000497244 IGSF3O75054 1194 aa12.82□□□□□ -0.36
CASS4-203ENST00000497244 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
CASS4-203ENST00000497244 FGD5Q6ZNL6 1462 aa12.81□□□□□ -0.36
CASS4-203ENST00000497244 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
CASS4-203ENST00000497244 BRD2P25440 801 aaKnown RBP12.79□□□□□ -0.36
CASS4-203ENST00000497244 RAD54L2Q9Y4B4 1467 aa12.79□□□□□ -0.36
CASS4-203ENST00000497244 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.36
CASS4-203ENST00000497244 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.37
CASS4-203ENST00000497244 ADRA2BP18089 450 aa12.76□□□□□ -0.37
CASS4-203ENST00000497244 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
CASS4-203ENST00000497244 MRC2Q9UBG0 1479 aa12.75□□□□□ -0.37
CASS4-203ENST00000497244 TAF7LQ5H9L4 462 aa12.73□□□□□ -0.37
CASS4-203ENST00000497244 NEFLP07196 543 aa12.71□□□□□ -0.37
CASS4-203ENST00000497244 WDR62O43379 1518 aa12.71□□□□□ -0.37
CASS4-203ENST00000497244 CUX2O14529 1486 aa12.71□□□□□ -0.38
CASS4-203ENST00000497244 WDR97A6NE52 1622 aa12.71□□□□□ -0.38
CASS4-203ENST00000497244 EEA1Q15075 1411 aa12.69□□□□□ -0.38
CASS4-203ENST00000497244 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
CASS4-203ENST00000497244 PKNOX2Q96KN3 472 aa12.67□□□□□ -0.38
CASS4-203ENST00000497244 ABCA10Q8WWZ4 1543 aa12.65□□□□□ -0.38
CASS4-203ENST00000497244 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
CASS4-203ENST00000497244 ZNF608Q9ULD9 1512 aaPredicted RBP12.64□□□□□ -0.39
CASS4-203ENST00000497244 HSP90B1P14625 803 aaKnown RBP12.63□□□□□ -0.39
CASS4-203ENST00000497244 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
CASS4-203ENST00000497244 ABCA5Q8WWZ7 1642 aa12.61□□□□□ -0.39
CASS4-203ENST00000497244 KIF21BO75037 1637 aa12.61□□□□□ -0.39
CASS4-203ENST00000497244 KIF27Q86VH2 1401 aa12.6□□□□□ -0.39
CASS4-203ENST00000497244 AQRO60306 1485 aaKnown RBP eCLIP12.6□□□□□ -0.391e-6■■■■□ 24
CASS4-203ENST00000497244 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
CASS4-203ENST00000497244 IGF1RP08069 1367 aa12.6□□□□□ -0.39
CASS4-203ENST00000497244 CFAP44Q96MT7 982 aa12.59□□□□□ -0.39
CASS4-203ENST00000497244 NPM3O75607 178 aaKnown RBP12.57□□□□□ -0.4
CASS4-203ENST00000497244 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
CASS4-203ENST00000497244 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
CASS4-203ENST00000497244 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
CASS4-203ENST00000497244 PBRM1Q86U86 1689 aa12.55□□□□□ -0.4
CASS4-203ENST00000497244 IFT140Q96RY7 1462 aa12.54□□□□□ -0.4
CASS4-203ENST00000497244 EIF4G3O43432 1585 aaKnown RBP12.54□□□□□ -0.4
CASS4-203ENST00000497244 GAPVD1Q14C86 1478 aa12.54□□□□□ -0.4
CASS4-203ENST00000497244 HMGB1P09429 215 aaKnown RBP12.54□□□□□ -0.4
CASS4-203ENST00000497244 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
CASS4-203ENST00000497244 CEP162Q5TB80 1403 aa12.52□□□□□ -0.4
CASS4-203ENST00000497244 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
CASS4-203ENST00000497244 CARMIL1Q5VZK9 1371 aa12.49□□□□□ -0.41
CASS4-203ENST00000497244 FGD1P98174 961 aa12.48□□□□□ -0.41
CASS4-203ENST00000497244 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
CASS4-203ENST00000497244 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
CASS4-203ENST00000497244 NBR1Q14596 966 aa12.46□□□□□ -0.41
CASS4-203ENST00000497244 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.42
CASS4-203ENST00000497244 ADAMTS12P58397 1594 aa12.45□□□□□ -0.42
CASS4-203ENST00000497244 CUL7Q14999 1698 aa12.45□□□□□ -0.42
CASS4-203ENST00000497244 SNAPC4Q5SXM2 1469 aa12.44□□□□□ -0.42
CASS4-203ENST00000497244 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
CASS4-203ENST00000497244 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
CASS4-203ENST00000497244 ARID3AQ99856 593 aa12.41□□□□□ -0.42
CASS4-203ENST00000497244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
CASS4-203ENST00000497244 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
CASS4-203ENST00000497244 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
CASS4-203ENST00000497244 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
CASS4-203ENST00000497244 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
CASS4-203ENST00000497244 CTTNBP2Q8WZ74 1663 aa12.36□□□□□ -0.43
CASS4-203ENST00000497244 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
CASS4-203ENST00000497244 CHD1O14646 1710 aa12.33□□□□□ -0.43
CASS4-203ENST00000497244 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
CASS4-203ENST00000497244 CLIP1P30622 1438 aa12.33□□□□□ -0.44
CASS4-203ENST00000497244 CEP170Q5SW79 1584 aa12.32□□□□□ -0.44
CASS4-203ENST00000497244 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
CASS4-203ENST00000497244 GRIN2AQ12879 1464 aa12.32□□□□□ -0.44
CASS4-203ENST00000497244 BCCIPQ9P287 314 aaKnown RBP eCLIP12.32□□□□□ -0.44
CASS4-203ENST00000497244 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
CASS4-203ENST00000497244 ZBTB7CA1YPR0 619 aa12.31□□□□□ -0.44
CASS4-203ENST00000497244 ARHGAP35Q9NRY4 1499 aa12.31□□□□□ -0.44
CASS4-203ENST00000497244 IRX6P78412 446 aaPredicted RBP12.31□□□□□ -0.44
CASS4-203ENST00000497244 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
CASS4-203ENST00000497244 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
CASS4-203ENST00000497244 VPS8Q8N3P4 1428 aa12.3□□□□□ -0.44
CASS4-203ENST00000497244 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
CASS4-203ENST00000497244 RSPH4AQ5TD94 716 aa12.28□□□□□ -0.44
CASS4-203ENST00000497244 CHMP7Q8WUX9 453 aaPredicted RBP12.26□□□□□ -0.45
CASS4-203ENST00000497244 IQGAP2Q13576 1575 aa12.24□□□□□ -0.45
CASS4-203ENST00000497244 NUP160Q12769 1436 aa12.23□□□□□ -0.45
CASS4-203ENST00000497244 FHOD3Q2V2M9 1422 aa12.23□□□□□ -0.45
CASS4-203ENST00000497244 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
CASS4-203ENST00000497244 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
CASS4-203ENST00000497244 ZNF428Q96B54 188 aa12.2□□□□□ -0.46
CASS4-203ENST00000497244 KIAA0586Q9BVV6 1533 aa12.2□□□□□ -0.46
CASS4-203ENST00000497244 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
CASS4-203ENST00000497244 DISP1Q96F81 1524 aa12.19□□□□□ -0.46
CASS4-203ENST00000497244 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms