RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 FAM212AQ96EL1 285 aa18.49■□□□□ 0.55
TARDBP-210ENST00000496840 CCDC61Q9Y6R9 512 aa18.47■□□□□ 0.55
TARDBP-210ENST00000496840 GABBR2O75899 941 aa18.41■□□□□ 0.54
TARDBP-210ENST00000496840 PHF12Q96QT6 1004 aa18.4■□□□□ 0.54
TARDBP-210ENST00000496840 GSE1Q14687 1217 aa18.37■□□□□ 0.53
TARDBP-210ENST00000496840 DCAF8Q5TAQ9 597 aa18.37■□□□□ 0.53
TARDBP-210ENST00000496840 KIF12Q96FN5 646 aa18.3■□□□□ 0.52
TARDBP-210ENST00000496840 GALR2O43603 387 aaPredicted RBP18.23■□□□□ 0.51
TARDBP-210ENST00000496840 SGIP1Q9BQI5 828 aa18.22■□□□□ 0.51
TARDBP-210ENST00000496840 CIZ1Q9ULV3 898 aaPredicted RBP18.22■□□□□ 0.51
TARDBP-210ENST00000496840 MAP3K13O43283 966 aa18.2■□□□□ 0.5
TARDBP-210ENST00000496840 LHX8Q68G74 356 aa18.2■□□□□ 0.5
TARDBP-210ENST00000496840 MS4A3Q96HJ5 214 aa18.2■□□□□ 0.5
TARDBP-210ENST00000496840 PYGBP11216 843 aa18.17■□□□□ 0.5
TARDBP-210ENST00000496840 CHRM1P11229 460 aaPredicted RBP18.16■□□□□ 0.5
TARDBP-210ENST00000496840 TRIM41Q8WV44 630 aa18.13■□□□□ 0.49
TARDBP-210ENST00000496840 PCDHB13Q9Y5F0 798 aa18.13■□□□□ 0.49
TARDBP-210ENST00000496840 DCBLD2Q96PD2 775 aa18.07■□□□□ 0.48
TARDBP-210ENST00000496840 IFNL1Q8IU54 200 aa18.05■□□□□ 0.48
TARDBP-210ENST00000496840 POTEIP0CG38 1075 aa18.02■□□□□ 0.48
TARDBP-210ENST00000496840 ZNF467Q7Z7K2 595 aaPredicted RBP18■□□□□ 0.47
TARDBP-210ENST00000496840 TIE1P35590 1138 aa17.98■□□□□ 0.47
TARDBP-210ENST00000496840 TRPC6Q9Y210 931 aa17.97■□□□□ 0.47
TARDBP-210ENST00000496840 ASTLQ6HA08 431 aaPredicted RBP17.95■□□□□ 0.46
TARDBP-210ENST00000496840 PKD2Q13563 968 aa17.94■□□□□ 0.46
TARDBP-210ENST00000496840 PCDHB8Q9UN66 801 aa17.94■□□□□ 0.46
TARDBP-210ENST00000496840 ATMINO43313 823 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-210ENST00000496840 BMP2KQ9NSY1 1161 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-210ENST00000496840 TTLL13PA6NNM8 815 aa17.86■□□□□ 0.45
TARDBP-210ENST00000496840 ECM2O94769 699 aaPredicted RBP17.86■□□□□ 0.45
TARDBP-210ENST00000496840 ATN1P54259 1190 aaPredicted RBP17.83■□□□□ 0.44
TARDBP-210ENST00000496840 RNF25Q96BH1 459 aaPredicted RBP17.82■□□□□ 0.44
TARDBP-210ENST00000496840 TMEM106CQ9BVX2 250 aa17.82■□□□□ 0.44
TARDBP-210ENST00000496840 RIOK3O14730 519 aaKnown RBP17.8■□□□□ 0.44
TARDBP-210ENST00000496840 PDAP1Q13442 181 aaKnown RBP17.8■□□□□ 0.44
TARDBP-210ENST00000496840 PELP1Q8IZL8 1130 aaKnown RBP17.8■□□□□ 0.44
TARDBP-210ENST00000496840 PSEN1P49768 467 aa17.78■□□□□ 0.44
TARDBP-210ENST00000496840 SLC39A7Q92504 469 aa17.74■□□□□ 0.43
TARDBP-210ENST00000496840 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
TARDBP-210ENST00000496840 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
TARDBP-210ENST00000496840 C7P10643 843 aa17.7■□□□□ 0.42
TARDBP-210ENST00000496840 TAOK2Q9UL54 1235 aa17.7■□□□□ 0.42
TARDBP-210ENST00000496840 RGL2O15211 777 aa17.69■□□□□ 0.42
TARDBP-210ENST00000496840 IER5LQ5T953 404 aa17.67■□□□□ 0.42
TARDBP-210ENST00000496840 METRNQ9UJH8 293 aa17.66■□□□□ 0.42
TARDBP-210ENST00000496840 AMER1Q5JTC6 1135 aaPredicted RBP17.61■□□□□ 0.41
TARDBP-210ENST00000496840 PLSCR2Q9NRY7 297 aa17.61■□□□□ 0.41
TARDBP-210ENST00000496840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
TARDBP-210ENST00000496840 ZFP91Q96JP5 570 aaPredicted RBP17.6■□□□□ 0.41
TARDBP-210ENST00000496840 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
TARDBP-210ENST00000496840 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
TARDBP-210ENST00000496840 MKRN3Q13064 507 aaKnown RBP17.52■□□□□ 0.4
TARDBP-210ENST00000496840 POTEFA5A3E0 1075 aa17.51■□□□□ 0.39
TARDBP-210ENST00000496840 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
TARDBP-210ENST00000496840 SEC24BO95487 1268 aa17.5■□□□□ 0.39
TARDBP-210ENST00000496840 RTN4Q9NQC3 1192 aaKnown RBP17.48■□□□□ 0.39
TARDBP-210ENST00000496840 COLQQ9Y215 455 aaPredicted RBP17.48■□□□□ 0.39
TARDBP-210ENST00000496840 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
TARDBP-210ENST00000496840 STK25O00506 426 aa17.46■□□□□ 0.39
TARDBP-210ENST00000496840 PLCG2P16885 1265 aa17.45■□□□□ 0.38
TARDBP-210ENST00000496840 OCEL1Q9H607 264 aa17.45■□□□□ 0.38
TARDBP-210ENST00000496840 POTEB2H3BUK9 544 aa17.43■□□□□ 0.38
TARDBP-210ENST00000496840 STK24Q9Y6E0 443 aa17.43■□□□□ 0.38
TARDBP-210ENST00000496840 ILDR1Q86SU0 546 aaPredicted RBP17.42■□□□□ 0.38
TARDBP-210ENST00000496840 EFCAB3Q8N7B9 438 aa17.42■□□□□ 0.38
TARDBP-210ENST00000496840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.39■□□□□ 0.37
TARDBP-210ENST00000496840 HS6ST3Q8IZP7 471 aa17.38■□□□□ 0.37
TARDBP-210ENST00000496840 SOX12O15370 315 aa17.37■□□□□ 0.37
TARDBP-210ENST00000496840 PDCD7Q8N8D1 485 aaKnown RBP17.36■□□□□ 0.37
TARDBP-210ENST00000496840 OTUD5Q96G74 571 aa17.35■□□□□ 0.37
TARDBP-210ENST00000496840 POTEJP0CG39 1038 aa17.31■□□□□ 0.36
TARDBP-210ENST00000496840 CHGAP10645 457 aaKnown RBP17.3■□□□□ 0.36
TARDBP-210ENST00000496840 MAMSTRQ6ZN01 415 aa17.28■□□□□ 0.36
TARDBP-210ENST00000496840 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
TARDBP-210ENST00000496840 DCAF8L2P0C7V8 631 aa17.25■□□□□ 0.35
TARDBP-210ENST00000496840 PHF8Q9UPP1 1060 aa17.24■□□□□ 0.35
TARDBP-210ENST00000496840 NLRP6P59044 892 aa17.23■□□□□ 0.35
TARDBP-210ENST00000496840 L3MBTL3Q96JM7 780 aaPredicted RBP17.22■□□□□ 0.35
TARDBP-210ENST00000496840 MFRPQ9BY79 579 aa17.22■□□□□ 0.35
TARDBP-210ENST00000496840 SCUBE2Q9NQ36 999 aa17.21■□□□□ 0.35
TARDBP-210ENST00000496840 FBXO22Q8NEZ5 403 aa17.2■□□□□ 0.34
TARDBP-210ENST00000496840 MS4A4AQ96JQ5 239 aa17.19■□□□□ 0.34
TARDBP-210ENST00000496840 DPY19L2Q6NUT2 758 aa17.18■□□□□ 0.34
TARDBP-210ENST00000496840 POTEMA6NI47 508 aa17.17■□□□□ 0.34
TARDBP-210ENST00000496840 BOLA1Q9Y3E2 137 aa17.12■□□□□ 0.33
TARDBP-210ENST00000496840 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
TARDBP-210ENST00000496840 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-210ENST00000496840 G3V3G9 751 aa17.08■□□□□ 0.32
TARDBP-210ENST00000496840 TMEM121BQ9BXQ6 578 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-210ENST00000496840 C3orf67Q6ZVT6 689 aa17.05■□□□□ 0.32
TARDBP-210ENST00000496840 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.05■□□□□ 0.32
TARDBP-210ENST00000496840 RYDENQ9NUL5 291 aaKnown RBP17.04■□□□□ 0.32
TARDBP-210ENST00000496840 MICALL2Q8IY33 904 aa17.02■□□□□ 0.32
TARDBP-210ENST00000496840 SLAIN1Q8ND83 568 aa16.97■□□□□ 0.31
TARDBP-210ENST00000496840 BBXQ8WY36 941 aaPredicted RBP16.97■□□□□ 0.31
TARDBP-210ENST00000496840 PCDH10Q9P2E7 1040 aa16.94■□□□□ 0.3
TARDBP-210ENST00000496840 PPP1R37O75864 691 aa16.93■□□□□ 0.3
TARDBP-210ENST00000496840 GTPBP6O43824 516 aaPredicted RBP16.92■□□□□ 0.3
TARDBP-210ENST00000496840 LCE2DQ5TA82 110 aaPredicted RBP16.86■□□□□ 0.29
TARDBP-210ENST00000496840 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms