RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 TPRNQ4KMQ1 711 aa6.76□□□□□ -1.33
NF1-216ENST00000495910 APPP05067 770 aa6.75□□□□□ -1.33
NF1-216ENST00000495910 HNRNPUQ00839 825 aaKnown RBP eCLIP6.75□□□□□ -1.33
NF1-216ENST00000495910 DRC7Q8IY82 874 aa6.74□□□□□ -1.33
NF1-216ENST00000495910 ARID4BQ4LE39 1312 aaPredicted RBP6.74□□□□□ -1.33
NF1-216ENST00000495910 GOLGA6L4A6NEF3 574 aa6.74□□□□□ -1.33
NF1-216ENST00000495910 CLSTN1O94985 981 aa6.73□□□□□ -1.33
NF1-216ENST00000495910 STK11IPQ8N1F8 1099 aa6.72□□□□□ -1.33
NF1-216ENST00000495910 ARID3AQ99856 593 aa6.71□□□□□ -1.34
NF1-216ENST00000495910 FAM9BQ8IZU0 186 aa6.7□□□□□ -1.34
NF1-216ENST00000495910 RRP12Q5JTH9 1297 aaKnown RBP6.7□□□□□ -1.34
NF1-216ENST00000495910 WDR43Q15061 677 aaKnown RBP eCLIP6.69□□□□□ -1.34
NF1-216ENST00000495910 LAS1LQ9Y4W2 734 aaKnown RBP6.69□□□□□ -1.34
NF1-216ENST00000495910 HSP90AB1P08238 724 aaKnown RBP6.68□□□□□ -1.34
NF1-216ENST00000495910 NOP58Q9Y2X3 529 aaKnown RBP6.68□□□□□ -1.34
NF1-216ENST00000495910 SALL2Q9Y467 1007 aaPredicted RBP6.68□□□□□ -1.34
NF1-216ENST00000495910 PATL2C9JE40 543 aaKnown RBP6.67□□□□□ -1.34
NF1-216ENST00000495910 DEKP35659 375 aaKnown RBP6.67□□□□□ -1.34
NF1-216ENST00000495910 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.67□□□□□ -1.34
NF1-216ENST00000495910 HSP90AA2PQ14568 343 aaPredicted RBP6.67□□□□□ -1.34
NF1-216ENST00000495910 VSIG10Q8N0Z9 540 aa6.66□□□□□ -1.34
NF1-216ENST00000495910 TMC1Q8TDI8 760 aa6.66□□□□□ -1.34
NF1-216ENST00000495910 TAF7LQ5H9L4 462 aa6.66□□□□□ -1.34
NF1-216ENST00000495910 FGD1P98174 961 aa6.65□□□□□ -1.34
NF1-216ENST00000495910 GOLGA6L3A6NEY3 463 aa6.64□□□□□ -1.35
NF1-216ENST00000495910 TPM4P67936 248 aa6.64□□□□□ -1.35
NF1-216ENST00000495910 ZBTB7CA1YPR0 619 aa6.63□□□□□ -1.35
NF1-216ENST00000495910 ZNF771Q7L3S4 317 aaPredicted RBP6.63□□□□□ -1.35
NF1-216ENST00000495910 TAOK2Q9UL54 1235 aa6.63□□□□□ -1.35
NF1-216ENST00000495910 GPS2Q13227 327 aa6.63□□□□□ -1.35
NF1-216ENST00000495910 MEX3CQ5U5Q3 659 aaKnown RBP6.63□□□□□ -1.35
NF1-216ENST00000495910 NOM1Q5C9Z4 860 aaKnown RBP6.63□□□□□ -1.35
NF1-216ENST00000495910 HSCBQ8IWL3 235 aa6.62□□□□□ -1.35
NF1-216ENST00000495910 LOC105371045A0A1W2PR82 267 aa6.62□□□□□ -1.35
NF1-216ENST00000495910 IRX6P78412 446 aaPredicted RBP6.62□□□□□ -1.35
NF1-216ENST00000495910 CEP89Q96ST8 783 aa6.62□□□□□ -1.35
NF1-216ENST00000495910 NEFHP12036 1026 aa6.62□□□□□ -1.35
NF1-216ENST00000495910 RSPH6AQ9H0K4 717 aa6.62□□□□□ -1.35
NF1-216ENST00000495910 NAP1L2Q9ULW6 460 aaPredicted RBP6.62□□□□□ -1.35
NF1-216ENST00000495910 CCDC180Q9P1Z9 1646 aa6.62□□□□□ -1.35
NF1-216ENST00000495910 HMMRO75330 724 aa6.61□□□□□ -1.35
NF1-216ENST00000495910 HSP90B1P14625 803 aaKnown RBP6.61□□□□□ -1.35
NF1-216ENST00000495910 HTATSF1O43719 755 aaKnown RBP6.61□□□□□ -1.35
NF1-216ENST00000495910 PDE4CQ08493 712 aa6.61□□□□□ -1.35
NF1-216ENST00000495910 A0A0G2JS52 829 aa6.6□□□□□ -1.35
NF1-216ENST00000495910 TPM3P06753 285 aa6.6□□□□□ -1.35
NF1-216ENST00000495910 KCNJ4P48050 445 aa6.6□□□□□ -1.35
NF1-216ENST00000495910 TEX35Q5T0J7 233 aa6.59□□□□□ -1.35
NF1-216ENST00000495910 SYAP1Q96A49 352 aaPredicted RBP6.59□□□□□ -1.35
NF1-216ENST00000495910 MRS2Q9HD23 443 aa6.59□□□□□ -1.35
NF1-216ENST00000495910 GNL2Q13823 731 aaKnown RBP6.59□□□□□ -1.36
NF1-216ENST00000495910 MCCP23508 829 aa6.59□□□□□ -1.36
NF1-216ENST00000495910 PODXL2Q9NZ53 605 aa6.58□□□□□ -1.36
NF1-216ENST00000495910 CCDC191Q8NCU4 936 aa6.58□□□□□ -1.36
NF1-216ENST00000495910 CCDC70Q6NSX1 233 aa6.58□□□□□ -1.36
NF1-216ENST00000495910 GBP4Q96PP9 640 aa6.58□□□□□ -1.36
NF1-216ENST00000495910 CHMP4BQ9H444 224 aaKnown RBP6.58□□□□□ -1.36
NF1-216ENST00000495910 ESF1Q9H501 851 aaKnown RBP6.58□□□□□ -1.36
NF1-216ENST00000495910 STAG3Q9UJ98 1225 aa6.58□□□□□ -1.36
NF1-216ENST00000495910 FBXO3Q9UK99 471 aa6.57□□□□□ -1.36
NF1-216ENST00000495910 FTSJ3Q8IY81 847 aaKnown RBP6.57□□□□□ -1.36
NF1-216ENST00000495910 CFAP44Q96MT7 982 aa6.57□□□□□ -1.36
NF1-216ENST00000495910 MAP7D2Q96T17 732 aa6.57□□□□□ -1.36
NF1-216ENST00000495910 TONSLQ96HA7 1378 aa6.57□□□□□ -1.36
NF1-216ENST00000495910 DDX10Q13206 875 aaKnown RBP6.56□□□□□ -1.36
NF1-216ENST00000495910 RDXP35241 583 aaKnown RBP6.56□□□□□ -1.36
NF1-216ENST00000495910 CCDC34Q96HJ3 373 aa6.56□□□□□ -1.36
NF1-216ENST00000495910 SCAF1Q9H7N4 1312 aaKnown RBP6.56□□□□□ -1.36
NF1-216ENST00000495910 CALD1Q05682 793 aaKnown RBP6.56□□□□□ -1.36
NF1-216ENST00000495910 KRI1Q8N9T8 703 aaKnown RBP6.55□□□□□ -1.36
NF1-216ENST00000495910 CDR1P51861 262 aa6.55□□□□□ -1.36
NF1-216ENST00000495910 CHGAP10645 457 aaKnown RBP6.54□□□□□ -1.36
NF1-216ENST00000495910 GOLGA2Q08379 1002 aa6.54□□□□□ -1.36
NF1-216ENST00000495910 OS9Q13438 667 aaPredicted RBP6.54□□□□□ -1.36
NF1-216ENST00000495910 NEXNQ0ZGT2 675 aa6.53□□□□□ -1.36
NF1-216ENST00000495910 RGS3P49796 1198 aa6.53□□□□□ -1.36
NF1-216ENST00000495910 MS4A1P11836 297 aa6.52□□□□□ -1.37
NF1-216ENST00000495910 PPP4R2Q9NY27 417 aa6.52□□□□□ -1.37
NF1-216ENST00000495910 DCTN1Q14203 1278 aa6.52□□□□□ -1.37
NF1-216ENST00000495910 CSPP1Q1MSJ5 1256 aa6.52□□□□□ -1.37
NF1-216ENST00000495910 CWC15Q9P013 229 aaKnown RBP6.52□□□□□ -1.37
NF1-216ENST00000495910 PLCD4Q9BRC7 762 aa6.52□□□□□ -1.37
NF1-216ENST00000495910 ISY1Q9ULR0 285 aaKnown RBP6.52□□□□□ -1.37
NF1-216ENST00000495910 AK7Q96M32 723 aa6.52□□□□□ -1.37
NF1-216ENST00000495910 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.51□□□□□ -1.37
NF1-216ENST00000495910 PKNOX2Q96KN3 472 aa6.51□□□□□ -1.37
NF1-216ENST00000495910 CCAR2Q8N163 923 aaKnown RBP6.51□□□□□ -1.37
NF1-216ENST00000495910 ACBD3Q9H3P7 528 aa6.51□□□□□ -1.37
NF1-216ENST00000495910 NPHP1O15259 732 aa6.5□□□□□ -1.37
NF1-216ENST00000495910 TSR1Q2NL82 804 aaKnown RBP6.5□□□□□ -1.37
NF1-216ENST00000495910 SPRYD3Q8NCJ5 442 aa6.5□□□□□ -1.37
NF1-216ENST00000495910 H0YHG0 523 aa6.5□□□□□ -1.37
NF1-216ENST00000495910 PHF14O94880 888 aa6.5□□□□□ -1.37
NF1-216ENST00000495910 HSP90AB3PQ58FF7 597 aa6.5□□□□□ -1.37
NF1-216ENST00000495910 ZRSR2Q15696 482 aaKnown RBP6.5□□□□□ -1.37
NF1-216ENST00000495910 GZF1Q9H116 711 aaPredicted RBP6.5□□□□□ -1.37
NF1-216ENST00000495910 CFAP53Q96M91 514 aa6.5□□□□□ -1.37
NF1-216ENST00000495910 CCDC66A2RUB6 948 aa6.49□□□□□ -1.37
NF1-216ENST00000495910 RUFY1Q96T51 708 aa6.49□□□□□ -1.37
NF1-216ENST00000495910 DYDC1Q8WWB3 177 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms