RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 CARMIL2Q6F5E8 1435 aa5.1□□□□□ -1.59
PHC3-215ENST00000495893 BECN1Q14457 450 aa5.1□□□□□ -1.59
PHC3-215ENST00000495893 SLC4A1APQ9BWU0 796 aaKnown RBP5.1□□□□□ -1.59
PHC3-215ENST00000495893 FANCD2Q9BXW9 1451 aa5.1□□□□□ -1.59
PHC3-215ENST00000495893 PPM1GO15355 546 aaPredicted RBP5.1□□□□□ -1.59
PHC3-215ENST00000495893 BICRAQ9NZM4 1560 aa5.1□□□□□ -1.59
PHC3-215ENST00000495893 GOLGA6L22H0YM25 854 aa5.08□□□□□ -1.6
PHC3-215ENST00000495893 TNNT3P45378 269 aaPredicted RBP5.07□□□□□ -1.6
PHC3-215ENST00000495893 FKBP8Q14318 412 aa5.07□□□□□ -1.6
PHC3-215ENST00000495893 DNTTIP2Q5QJE6 756 aaKnown RBP5.07□□□□□ -1.6
PHC3-215ENST00000495893 CHAF1AQ13111 956 aaPredicted RBP5.07□□□□□ -1.6
PHC3-215ENST00000495893 L1TD1Q5T7N2 865 aaKnown RBP5.06□□□□□ -1.6
PHC3-215ENST00000495893 KIF27Q86VH2 1401 aa5.06□□□□□ -1.6
PHC3-215ENST00000495893 PTMAP06454 111 aaKnown RBP5.06□□□□□ -1.6
PHC3-215ENST00000495893 ITGAEP38570 1179 aa5.05□□□□□ -1.6
PHC3-215ENST00000495893 SCAF1Q9H7N4 1312 aaKnown RBP5.05□□□□□ -1.6
PHC3-215ENST00000495893 EEA1Q15075 1411 aa5.04□□□□□ -1.6
PHC3-215ENST00000495893 GOLGA3Q08378 1498 aa5.04□□□□□ -1.6
PHC3-215ENST00000495893 RSF1Q96T23 1441 aaPredicted RBP5.04□□□□□ -1.6
PHC3-215ENST00000495893 PEG3Q9GZU2 1588 aa5.03□□□□□ -1.6
PHC3-215ENST00000495893 WDR97A6NE52 1622 aa5.03□□□□□ -1.6
PHC3-215ENST00000495893 RSPH6AQ9H0K4 717 aa5.03□□□□□ -1.6
PHC3-215ENST00000495893 GOLGA6L6A8MZA4 724 aa5.03□□□□□ -1.6
PHC3-215ENST00000495893 SYNJ1O43426 1573 aa5.03□□□□□ -1.6
PHC3-215ENST00000495893 SOGA1O94964 1423 aa5.02□□□□□ -1.61
PHC3-215ENST00000495893 CCDC136Q96JN2 1154 aa5.02□□□□□ -1.61
PHC3-215ENST00000495893 ARXQ96QS3 562 aa5.02□□□□□ -1.61
PHC3-215ENST00000495893 ARID4BQ4LE39 1312 aaPredicted RBP5.02□□□□□ -1.61
PHC3-215ENST00000495893 NRDCO43847 1150 aa5.02□□□□□ -1.61
PHC3-215ENST00000495893 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.02□□□□□ -1.61
PHC3-215ENST00000495893 DEKP35659 375 aaKnown RBP5.01□□□□□ -1.61
PHC3-215ENST00000495893 CHIC1Q5VXU3 224 aa5.01□□□□□ -1.61
PHC3-215ENST00000495893 CFTRP13569 1480 aa5.01□□□□□ -1.61
PHC3-215ENST00000495893 UNC13AQ9UPW8 1703 aa5.01□□□□□ -1.61
PHC3-215ENST00000495893 MSNP26038 577 aaKnown RBP5.01□□□□□ -1.61
PHC3-215ENST00000495893 GRIN2BQ13224 1484 aa5.01□□□□□ -1.61
PHC3-215ENST00000495893 NOP58Q9Y2X3 529 aaKnown RBP5.01□□□□□ -1.61
PHC3-215ENST00000495893 FOXD1Q16676 465 aa5.01□□□□□ -1.61
PHC3-215ENST00000495893 SETQ01105 290 aaPredicted RBP5.01□□□□□ -1.61
PHC3-215ENST00000495893 AMER1Q5JTC6 1135 aaPredicted RBP5.01□□□□□ -1.61
PHC3-215ENST00000495893 USP35Q9P2H5 1018 aa5.01□□□□□ -1.61
PHC3-215ENST00000495893 MROH2BQ7Z745 1585 aa5.01□□□□□ -1.61
PHC3-215ENST00000495893 A0A0U1RQG5 324 aaPredicted RBP5□□□□□ -1.61
PHC3-215ENST00000495893 RTN4Q9NQC3 1192 aaKnown RBP5□□□□□ -1.61
PHC3-215ENST00000495893 LAS1LQ9Y4W2 734 aaKnown RBP5□□□□□ -1.61
PHC3-215ENST00000495893 PODXL2Q9NZ53 605 aa5□□□□□ -1.61
PHC3-215ENST00000495893 MAGI1Q96QZ7 1491 aaPredicted RBP5□□□□□ -1.61
PHC3-215ENST00000495893 DNMBPQ6XZF7 1577 aa5□□□□□ -1.61
PHC3-215ENST00000495893 HSP90AA2PQ14568 343 aaPredicted RBP5□□□□□ -1.61
PHC3-215ENST00000495893 CLIP1P30622 1438 aa4.99□□□□□ -1.61
PHC3-215ENST00000495893 APPP05067 770 aa4.99□□□□□ -1.61
PHC3-215ENST00000495893 NEUROD1Q13562 356 aa4.99□□□□□ -1.61
PHC3-215ENST00000495893 ZRSR1Q15695 479 aaKnown RBP4.98□□□□□ -1.61
PHC3-215ENST00000495893 PNNQ9H307 717 aaKnown RBP4.98□□□□□ -1.61
PHC3-215ENST00000495893 WDR62O43379 1518 aa4.97□□□□□ -1.61
PHC3-215ENST00000495893 DNAJC5BQ9UF47 199 aa4.96□□□□□ -1.61
PHC3-215ENST00000495893 PKNOX2Q96KN3 472 aa4.96□□□□□ -1.62
PHC3-215ENST00000495893 PLEKHD1A6NEE1 506 aa4.95□□□□□ -1.62
PHC3-215ENST00000495893 GOLGA6L3A6NEY3 463 aa4.95□□□□□ -1.62
PHC3-215ENST00000495893 GOLGA6L1Q8N7Z2 621 aa4.95□□□□□ -1.62
PHC3-215ENST00000495893 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.95□□□□□ -1.62
PHC3-215ENST00000495893 VSIG10Q8N0Z9 540 aa4.95□□□□□ -1.62
PHC3-215ENST00000495893 FHAD1B1AJZ9 1412 aa4.95□□□□□ -1.62
PHC3-215ENST00000495893 CCDC88BA6NC98 1476 aa4.95□□□□□ -1.62
PHC3-215ENST00000495893 GAPVD1Q14C86 1478 aa4.94□□□□□ -1.62
PHC3-215ENST00000495893 POGZQ7Z3K3 1410 aa4.94□□□□□ -1.62
PHC3-215ENST00000495893 HNRNPUQ00839 825 aaKnown RBP eCLIP4.94□□□□□ -1.62
PHC3-215ENST00000495893 SYNJ2O15056 1496 aa4.94□□□□□ -1.62
PHC3-215ENST00000495893 KIAA2012Q0VF49 1180 aa4.93□□□□□ -1.62
PHC3-215ENST00000495893 TEX14Q8IWB6 1497 aa4.93□□□□□ -1.62
PHC3-215ENST00000495893 MYH16Q9H6N6 1097 aa4.92□□□□□ -1.62
PHC3-215ENST00000495893 DNAJC5Q9H3Z4 198 aa4.92□□□□□ -1.62
PHC3-215ENST00000495893 HDGFP51858 240 aaKnown RBP4.92□□□□□ -1.62
PHC3-215ENST00000495893 TOPBP1Q92547 1522 aa4.92□□□□□ -1.62
PHC3-215ENST00000495893 NOM1Q5C9Z4 860 aaKnown RBP4.91□□□□□ -1.62
PHC3-215ENST00000495893 CASC1Q6TDU7 716 aa4.91□□□□□ -1.62
PHC3-215ENST00000495893 PRKCSHP14314 528 aaPredicted RBP4.91□□□□□ -1.62
PHC3-215ENST00000495893 CEP162Q5TB80 1403 aa4.91□□□□□ -1.62
PHC3-215ENST00000495893 FGD5Q6ZNL6 1462 aa4.91□□□□□ -1.62
PHC3-215ENST00000495893 GOLGA6L4A6NEF3 574 aa4.91□□□□□ -1.62
PHC3-215ENST00000495893 CYB5RLQ6IPT4 315 aa4.91□□□□□ -1.62
PHC3-215ENST00000495893 FAM50AQ14320 339 aaKnown RBP4.9□□□□□ -1.62
PHC3-215ENST00000495893 STAG3Q9UJ98 1225 aa4.9□□□□□ -1.62
PHC3-215ENST00000495893 WIZO95785 1651 aa4.9□□□□□ -1.62
PHC3-215ENST00000495893 STK11IPQ8N1F8 1099 aa4.9□□□□□ -1.62
PHC3-215ENST00000495893 TRIM52Q96A61 297 aa4.9□□□□□ -1.63
PHC3-215ENST00000495893 MAP7D2Q96T17 732 aa4.9□□□□□ -1.63
PHC3-215ENST00000495893 TNIKQ9UKE5 1360 aa4.9□□□□□ -1.63
PHC3-215ENST00000495893 MTERF4Q7Z6M4 381 aaKnown RBP4.9□□□□□ -1.63
PHC3-215ENST00000495893 PTPRGP23470 1445 aa4.89□□□□□ -1.63
PHC3-215ENST00000495893 FMN1Q68DA7 1419 aa4.89□□□□□ -1.63
PHC3-215ENST00000495893 CARMIL1Q5VZK9 1371 aa4.89□□□□□ -1.63
PHC3-215ENST00000495893 NESP48681 1621 aa4.89□□□□□ -1.63
PHC3-215ENST00000495893 PPP4R2Q9NY27 417 aa4.88□□□□□ -1.63
PHC3-215ENST00000495893 LOC105371045A0A1W2PR82 267 aa4.88□□□□□ -1.63
PHC3-215ENST00000495893 TDRD9Q8NDG6 1382 aaKnown RBP4.88□□□□□ -1.63
PHC3-215ENST00000495893 KANK1Q14678 1352 aa4.88□□□□□ -1.63
PHC3-215ENST00000495893 HTATSF1O43719 755 aaKnown RBP4.88□□□□□ -1.63
PHC3-215ENST00000495893 SNAPC4Q5SXM2 1469 aa4.88□□□□□ -1.63
PHC3-215ENST00000495893 CSRNP3Q8WYN3 585 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms