RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
GTF3C2-213ENST00000495298 ADCY10Q96PN6 1610 aa16.95■□□□□ 0.3
GTF3C2-213ENST00000495298 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
GTF3C2-213ENST00000495298 DIP2BQ9P265 1576 aa16.93■□□□□ 0.3
GTF3C2-213ENST00000495298 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
GTF3C2-213ENST00000495298 FAM69CQ0P6D2 419 aa16.9■□□□□ 0.3
GTF3C2-213ENST00000495298 TSPOAP1O95153 1857 aa16.85■□□□□ 0.29
GTF3C2-213ENST00000495298 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
GTF3C2-213ENST00000495298 IGF1RP08069 1367 aa16.83■□□□□ 0.28
GTF3C2-213ENST00000495298 KIAA0586Q9BVV6 1533 aa16.83■□□□□ 0.28
GTF3C2-213ENST00000495298 KDM6BO15054 1643 aa16.81■□□□□ 0.28
GTF3C2-213ENST00000495298 NPM1P06748 294 aaKnown RBP eCLIP16.8■□□□□ 0.28
GTF3C2-213ENST00000495298 CUL7Q14999 1698 aa16.8■□□□□ 0.28
GTF3C2-213ENST00000495298 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
GTF3C2-213ENST00000495298 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
GTF3C2-213ENST00000495298 TTBK1Q5TCY1 1321 aaPredicted RBP16.73■□□□□ 0.27
GTF3C2-213ENST00000495298 PPRC1Q5VV67 1664 aaKnown RBP16.73■□□□□ 0.27
GTF3C2-213ENST00000495298 PTPRGP23470 1445 aa16.71■□□□□ 0.27
GTF3C2-213ENST00000495298 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
GTF3C2-213ENST00000495298 ABCC2Q92887 1545 aa16.69■□□□□ 0.26
GTF3C2-213ENST00000495298 ASXL2Q76L83 1435 aa16.67■□□□□ 0.26
GTF3C2-213ENST00000495298 IQGAP2Q13576 1575 aa16.67■□□□□ 0.26
GTF3C2-213ENST00000495298 TNIKQ9UKE5 1360 aa16.66■□□□□ 0.26
GTF3C2-213ENST00000495298 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
GTF3C2-213ENST00000495298 GLI2P10070 1586 aa16.64■□□□□ 0.25
GTF3C2-213ENST00000495298 CARMIL2Q6F5E8 1435 aa16.62■□□□□ 0.25
GTF3C2-213ENST00000495298 COL17A1Q9UMD9 1497 aaPredicted RBP16.62■□□□□ 0.25
GTF3C2-213ENST00000495298 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
GTF3C2-213ENST00000495298 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
GTF3C2-213ENST00000495298 UACAQ9BZF9 1416 aa16.59■□□□□ 0.25
GTF3C2-213ENST00000495298 ADGRL1O94910 1474 aa16.58■□□□□ 0.24
GTF3C2-213ENST00000495298 MAP3K4Q9Y6R4 1608 aa16.58■□□□□ 0.24
GTF3C2-213ENST00000495298 ZCCHC11Q5TAX3 1644 aaKnown RBP16.57■□□□□ 0.24
GTF3C2-213ENST00000495298 EPRSP07814 1512 aaKnown RBP16.57■□□□□ 0.24
GTF3C2-213ENST00000495298 KDM5BQ9UGL1 1544 aa16.56■□□□□ 0.24
GTF3C2-213ENST00000495298 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
GTF3C2-213ENST00000495298 UGGT2Q9NYU1 1516 aa16.55■□□□□ 0.24
GTF3C2-213ENST00000495298 RAPGEF2Q9Y4G8 1499 aa16.51■□□□□ 0.23
GTF3C2-213ENST00000495298 ILDR1Q86SU0 546 aaPredicted RBP16.51■□□□□ 0.23
GTF3C2-213ENST00000495298 TEX14Q8IWB6 1497 aa16.46■□□□□ 0.23
GTF3C2-213ENST00000495298 HECW2Q9P2P5 1572 aa16.46■□□□□ 0.23
GTF3C2-213ENST00000495298 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
GTF3C2-213ENST00000495298 CTTNBP2Q8WZ74 1663 aa16.44■□□□□ 0.22
GTF3C2-213ENST00000495298 ABCA8O94911 1581 aa16.41■□□□□ 0.22
GTF3C2-213ENST00000495298 CFAP43Q8NDM7 1665 aa16.38■□□□□ 0.21
GTF3C2-213ENST00000495298 MAGI3Q5TCQ9 1506 aa16.37■□□□□ 0.21
GTF3C2-213ENST00000495298 CD109Q6YHK3 1445 aa16.36■□□□□ 0.21
GTF3C2-213ENST00000495298 KIF21BO75037 1637 aa16.35■□□□□ 0.21
GTF3C2-213ENST00000495298 KCNH8Q96L42 1107 aa16.35■□□□□ 0.21
GTF3C2-213ENST00000495298 GOLGA3Q08378 1498 aa16.32■□□□□ 0.2
GTF3C2-213ENST00000495298 PRXQ9BXM0 1461 aa16.31■□□□□ 0.2
GTF3C2-213ENST00000495298 ARID3CA6NKF2 412 aa16.3■□□□□ 0.2
GTF3C2-213ENST00000495298 ATP10BO94823 1461 aa16.25■□□□□ 0.19
GTF3C2-213ENST00000495298 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
GTF3C2-213ENST00000495298 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
GTF3C2-213ENST00000495298 ABCA9Q8IUA7 1624 aa16.23■□□□□ 0.19
GTF3C2-213ENST00000495298 ADAMTSL3P82987 1691 aa16.21■□□□□ 0.18
GTF3C2-213ENST00000495298 SAMD9Q5K651 1589 aa16.2■□□□□ 0.18
GTF3C2-213ENST00000495298 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
GTF3C2-213ENST00000495298 PTPRMP28827 1452 aa16.17■□□□□ 0.18
GTF3C2-213ENST00000495298 RAPGEF6Q8TEU7 1601 aa16.17■□□□□ 0.18
GTF3C2-213ENST00000495298 RAPGEF3O95398 923 aa16.17■□□□□ 0.18
GTF3C2-213ENST00000495298 BCORL1Q5H9F3 1711 aa16.14■□□□□ 0.17
GTF3C2-213ENST00000495298 MADDQ8WXG6 1647 aa16.14■□□□□ 0.17
GTF3C2-213ENST00000495298 NUP153P49790 1475 aaKnown RBP16.13■□□□□ 0.17
GTF3C2-213ENST00000495298 NEO1Q92859 1461 aa16.11■□□□□ 0.17
GTF3C2-213ENST00000495298 PHLDB1Q86UU1 1377 aa16.09■□□□□ 0.17
GTF3C2-213ENST00000495298 FHOD3Q2V2M9 1422 aa16.09■□□□□ 0.17
GTF3C2-213ENST00000495298 RICTORQ6R327 1708 aa16.08■□□□□ 0.17
GTF3C2-213ENST00000495298 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.17
GTF3C2-213ENST00000495298 ARHGEF40Q8TER5 1519 aa16.08■□□□□ 0.16
GTF3C2-213ENST00000495298 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
GTF3C2-213ENST00000495298 LMTK3Q96Q04 1460 aa16.07■□□□□ 0.16
GTF3C2-213ENST00000495298 PCF11O94913 1555 aaKnown RBP16.07■□□□□ 0.16
GTF3C2-213ENST00000495298 RIMS1Q86UR5 1692 aaKnown RBP16.07■□□□□ 0.16
GTF3C2-213ENST00000495298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
GTF3C2-213ENST00000495298 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
GTF3C2-213ENST00000495298 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
GTF3C2-213ENST00000495298 FBXO41Q8TF61 875 aa16.05■□□□□ 0.16
GTF3C2-213ENST00000495298 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
GTF3C2-213ENST00000495298 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
GTF3C2-213ENST00000495298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
GTF3C2-213ENST00000495298 DENND4BO75064 1496 aaPredicted RBP16.01■□□□□ 0.15
GTF3C2-213ENST00000495298 AKNAQ7Z591 1439 aa16.01■□□□□ 0.15
GTF3C2-213ENST00000495298 FANCAO15360 1455 aa16■□□□□ 0.15
GTF3C2-213ENST00000495298 FAM9AQ8IZU1 332 aaPredicted RBP16■□□□□ 0.15
GTF3C2-213ENST00000495298 YEATS2Q9ULM3 1422 aa16■□□□□ 0.15
GTF3C2-213ENST00000495298 CDK13Q14004 1512 aaKnown RBP15.98■□□□□ 0.15
GTF3C2-213ENST00000495298 ZMYM4Q5VZL5 1548 aa15.98■□□□□ 0.15
GTF3C2-213ENST00000495298 HSPA2P54652 639 aa15.97■□□□□ 0.15
GTF3C2-213ENST00000495298 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
GTF3C2-213ENST00000495298 CFAP74Q9C0B2 1584 aa15.96■□□□□ 0.15
GTF3C2-213ENST00000495298 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.15
GTF3C2-213ENST00000495298 HECW1Q76N89 1606 aa15.95■□□□□ 0.14
GTF3C2-213ENST00000495298 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
GTF3C2-213ENST00000495298 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
GTF3C2-213ENST00000495298 FER1L4A9Z1Z3 1794 aa15.92■□□□□ 0.14
GTF3C2-213ENST00000495298 EEA1Q15075 1411 aa15.91■□□□□ 0.14
GTF3C2-213ENST00000495298 POGZQ7Z3K3 1410 aa15.9■□□□□ 0.14
GTF3C2-213ENST00000495298 MLECQ14165 292 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 760.8 ms