RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 RAPGEF2Q9Y4G8 1499 aa28.88■■■□□ 2.21
SNX17-209ENST00000494893 KIAA0586Q9BVV6 1533 aa28.86■■■□□ 2.21
SNX17-209ENST00000494893 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
SNX17-209ENST00000494893 PRXQ9BXM0 1461 aa28.84■■■□□ 2.21
SNX17-209ENST00000494893 JPH4Q96JJ6 628 aa28.82■■■□□ 2.2
SNX17-209ENST00000494893 PRG4Q92954 1404 aaPredicted RBP28.78■■■□□ 2.2
SNX17-209ENST00000494893 CSRNP3Q8WYN3 585 aa28.76■■■□□ 2.19
SNX17-209ENST00000494893 EEA1Q15075 1411 aa28.76■■■□□ 2.19
SNX17-209ENST00000494893 IQGAP2Q13576 1575 aa28.69■■■□□ 2.18
SNX17-209ENST00000494893 FAM9AQ8IZU1 332 aaPredicted RBP28.68■■■□□ 2.18
SNX17-209ENST00000494893 UGGT2Q9NYU1 1516 aa28.57■■■□□ 2.16
SNX17-209ENST00000494893 CTTNBP2Q8WZ74 1663 aa28.57■■■□□ 2.16
SNX17-209ENST00000494893 DISP1Q96F81 1524 aa28.55■■■□□ 2.16
SNX17-209ENST00000494893 KIF21BO75037 1637 aa28.51■■■□□ 2.15
SNX17-209ENST00000494893 CARMIL2Q6F5E8 1435 aa28.48■■■□□ 2.15
SNX17-209ENST00000494893 KIAA0556O60303 1618 aa28.44■■■□□ 2.14
SNX17-209ENST00000494893 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
SNX17-209ENST00000494893 PTPRGP23470 1445 aa28.42■■■□□ 2.14
SNX17-209ENST00000494893 ADCY10Q96PN6 1610 aa28.37■■■□□ 2.13
SNX17-209ENST00000494893 TTBK1Q5TCY1 1321 aaPredicted RBP28.36■■■□□ 2.13
SNX17-209ENST00000494893 GOLGA3Q08378 1498 aa28.33■■■□□ 2.13
SNX17-209ENST00000494893 EHMT2Q96KQ7 1210 aa28.31■■■□□ 2.12
SNX17-209ENST00000494893 SAMD9Q5K651 1589 aa28.28■■■□□ 2.12
SNX17-209ENST00000494893 UACAQ9BZF9 1416 aa28.25■■■□□ 2.11
SNX17-209ENST00000494893 UHRF1BP1LA0JNW5 1464 aa28.23■■■□□ 2.11
SNX17-209ENST00000494893 P3H3Q8IVL6 736 aa28.22■■■□□ 2.11
SNX17-209ENST00000494893 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
SNX17-209ENST00000494893 ABCC2Q92887 1545 aa28.2■■■□□ 2.1
SNX17-209ENST00000494893 UBTFP17480 764 aaKnown RBP28.2■■■□□ 2.1
SNX17-209ENST00000494893 RANGAP1P46060 587 aaPredicted RBP28.18■■■□□ 2.1
SNX17-209ENST00000494893 PLB1Q6P1J6 1458 aa28.18■■■□□ 2.1
SNX17-209ENST00000494893 ABCA8O94911 1581 aa28.16■■■□□ 2.1
SNX17-209ENST00000494893 MAPKBP1O60336 1514 aa28.15■■■□□ 2.1
SNX17-209ENST00000494893 NPM1P06748 294 aaKnown RBP eCLIP28.14■■■□□ 2.1
SNX17-209ENST00000494893 FHOD3Q2V2M9 1422 aa28.11■■■□□ 2.09
SNX17-209ENST00000494893 KDM5BQ9UGL1 1544 aa28.11■■■□□ 2.09
SNX17-209ENST00000494893 EFCAB5A4FU69 1503 aa28.1■■■□□ 2.09
SNX17-209ENST00000494893 ZCCHC11Q5TAX3 1644 aaKnown RBP28.03■■■□□ 2.08
SNX17-209ENST00000494893 ABCC10Q5T3U5 1492 aa28.03■■■□□ 2.08
SNX17-209ENST00000494893 ARHGAP35Q9NRY4 1499 aa28.03■■■□□ 2.08
SNX17-209ENST00000494893 KIF13AQ9H1H9 1805 aa28.02■■■□□ 2.08
SNX17-209ENST00000494893 ASXL2Q76L83 1435 aa28.01■■■□□ 2.07
SNX17-209ENST00000494893 DIP2BQ9P265 1576 aa28■■■□□ 2.07
SNX17-209ENST00000494893 RAPGEF6Q8TEU7 1601 aa27.96■■■□□ 2.07
SNX17-209ENST00000494893 FAM69CQ0P6D2 419 aa27.93■■■□□ 2.06
SNX17-209ENST00000494893 ATP10BO94823 1461 aa27.92■■■□□ 2.06
SNX17-209ENST00000494893 NUP153P49790 1475 aaKnown RBP27.91■■■□□ 2.06
SNX17-209ENST00000494893 ARID3CA6NKF2 412 aa27.89■■■□□ 2.06
SNX17-209ENST00000494893 EPRSP07814 1512 aaKnown RBP27.86■■■□□ 2.05
SNX17-209ENST00000494893 WDR7Q9Y4E6 1490 aa27.85■■■□□ 2.05
SNX17-209ENST00000494893 GLI2P10070 1586 aa27.83■■■□□ 2.05
SNX17-209ENST00000494893 LOC105371045A0A1W2PR82 267 aa27.83■■■□□ 2.05
SNX17-209ENST00000494893 CLIP1P30622 1438 aa27.83■■■□□ 2.05
SNX17-209ENST00000494893 FMN1Q68DA7 1419 aa27.82■■■□□ 2.04
SNX17-209ENST00000494893 CEP162Q5TB80 1403 aa27.72■■■□□ 2.03
SNX17-209ENST00000494893 CDK13Q14004 1512 aaKnown RBP27.72■■■□□ 2.03
SNX17-209ENST00000494893 MAP3K4Q9Y6R4 1608 aa27.71■■■□□ 2.03
SNX17-209ENST00000494893 PPRC1Q5VV67 1664 aaKnown RBP27.71■■■□□ 2.03
SNX17-209ENST00000494893 KCNH8Q96L42 1107 aa27.7■■■□□ 2.02
SNX17-209ENST00000494893 HECW1Q76N89 1606 aa27.7■■■□□ 2.02
SNX17-209ENST00000494893 TSPOAP1O95153 1857 aa27.68■■■□□ 2.02
SNX17-209ENST00000494893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.68■■■□□ 2.02
SNX17-209ENST00000494893 HNRNPUL2Q1KMD3 747 aaKnown RBP27.68■■■□□ 2.02
SNX17-209ENST00000494893 PCF11O94913 1555 aaKnown RBP27.68■■■□□ 2.02
SNX17-209ENST00000494893 CASKIN1Q8WXD9 1431 aa27.66■■■□□ 2.02
SNX17-209ENST00000494893 LRRIQ1Q96JM4 1722 aa27.64■■■□□ 2.01
SNX17-209ENST00000494893 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
SNX17-209ENST00000494893 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
SNX17-209ENST00000494893 CD109Q6YHK3 1445 aa27.58■■■□□ 2.01
SNX17-209ENST00000494893 PLEKHD1A6NEE1 506 aa27.58■■■□□ 2.01
SNX17-209ENST00000494893 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
SNX17-209ENST00000494893 ABCA9Q8IUA7 1624 aa27.57■■■□□ 2
SNX17-209ENST00000494893 MAGI3Q5TCQ9 1506 aa27.55■■■□□ 2
SNX17-209ENST00000494893 TEX14Q8IWB6 1497 aa27.51■■□□□ 1.99
SNX17-209ENST00000494893 CCDC18Q5T9S5 1454 aa27.5■■□□□ 1.99
SNX17-209ENST00000494893 COL17A1Q9UMD9 1497 aaPredicted RBP27.5■■□□□ 1.99
SNX17-209ENST00000494893 KDM6BO15054 1643 aa27.49■■□□□ 1.99
SNX17-209ENST00000494893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.49■■□□□ 1.99
SNX17-209ENST00000494893 TROQ12816 1431 aaPredicted RBP27.46■■□□□ 1.99
SNX17-209ENST00000494893 TTC37Q6PGP7 1564 aa27.46■■□□□ 1.99
SNX17-209ENST00000494893 CDK11AQ9UQ88 783 aaPredicted RBP27.43■■□□□ 1.98
SNX17-209ENST00000494893 KIF14Q15058 1648 aa27.42■■□□□ 1.98
SNX17-209ENST00000494893 VPS8Q8N3P4 1428 aa27.38■■□□□ 1.97
SNX17-209ENST00000494893 NEO1Q92859 1461 aa27.32■■□□□ 1.96
SNX17-209ENST00000494893 ARAP3Q8WWN8 1544 aa27.31■■□□□ 1.96
SNX17-209ENST00000494893 PLCH2O75038 1416 aa27.31■■□□□ 1.96
SNX17-209ENST00000494893 PHLDB1Q86UU1 1377 aa27.28■■□□□ 1.96
SNX17-209ENST00000494893 FANCAO15360 1455 aa27.27■■□□□ 1.96
SNX17-209ENST00000494893 AKNAQ7Z591 1439 aa27.24■■□□□ 1.95
SNX17-209ENST00000494893 MYO5CQ9NQX4 1742 aa27.24■■□□□ 1.95
SNX17-209ENST00000494893 TIAM1Q13009 1591 aa27.22■■□□□ 1.95
SNX17-209ENST00000494893 CFAP74Q9C0B2 1584 aa27.21■■□□□ 1.95
SNX17-209ENST00000494893 MTUS2Q5JR59 1369 aa27.21■■□□□ 1.95
SNX17-209ENST00000494893 FRMPD1Q5SYB0 1578 aa27.2■■□□□ 1.94
SNX17-209ENST00000494893 EHBP1L1Q8N3D4 1523 aa27.19■■□□□ 1.94
SNX17-209ENST00000494893 RAPGEF3O95398 923 aa27.18■■□□□ 1.94
SNX17-209ENST00000494893 PREX2Q70Z35 1606 aa27.17■■□□□ 1.94
SNX17-209ENST00000494893 CDC42BPBQ9Y5S2 1711 aa27.16■■□□□ 1.94
SNX17-209ENST00000494893 ARHGAP5Q13017 1502 aa27.16■■□□□ 1.94
SNX17-209ENST00000494893 EFCAB2Q5VUJ9 269 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms