RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
BRD3-206ENST00000494743 CHD1O14646 1710 aa19.74■□□□□ 0.75
BRD3-206ENST00000494743 SYNJ2O15056 1496 aa19.68■□□□□ 0.74
BRD3-206ENST00000494743 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
BRD3-206ENST00000494743 TNIKQ9UKE5 1360 aa19.66■□□□□ 0.74
BRD3-206ENST00000494743 GRIN2AQ12879 1464 aa19.65■□□□□ 0.74
BRD3-206ENST00000494743 UBTFP17480 764 aaKnown RBP19.61■□□□□ 0.73
BRD3-206ENST00000494743 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.72
BRD3-206ENST00000494743 FBLN2P98095 1184 aa19.55■□□□□ 0.72
BRD3-206ENST00000494743 NUP160Q12769 1436 aa19.55■□□□□ 0.72
BRD3-206ENST00000494743 CEP170Q5SW79 1584 aa19.52■□□□□ 0.71
BRD3-206ENST00000494743 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
BRD3-206ENST00000494743 CTTNBP2Q8WZ74 1663 aa19.5■□□□□ 0.71
BRD3-206ENST00000494743 KIAA0586Q9BVV6 1533 aa19.49■□□□□ 0.71
BRD3-206ENST00000494743 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
BRD3-206ENST00000494743 IQGAP2Q13576 1575 aa19.45■□□□□ 0.7
BRD3-206ENST00000494743 CLIP1P30622 1438 aa19.43■□□□□ 0.7
BRD3-206ENST00000494743 ILDR1Q86SU0 546 aaPredicted RBP19.39■□□□□ 0.69
BRD3-206ENST00000494743 ARHGAP35Q9NRY4 1499 aa19.39■□□□□ 0.69
BRD3-206ENST00000494743 UGGT2Q9NYU1 1516 aa19.39■□□□□ 0.69
BRD3-206ENST00000494743 EFCAB5A4FU69 1503 aa19.37■□□□□ 0.69
BRD3-206ENST00000494743 SAMD9Q5K651 1589 aa19.36■□□□□ 0.69
BRD3-206ENST00000494743 RANGAP1P46060 587 aaPredicted RBP19.34■□□□□ 0.69
BRD3-206ENST00000494743 DISP1Q96F81 1524 aa19.31■□□□□ 0.68
BRD3-206ENST00000494743 SHROOM2Q13796 1616 aa19.3■□□□□ 0.68
BRD3-206ENST00000494743 JPH4Q96JJ6 628 aa19.3■□□□□ 0.68
BRD3-206ENST00000494743 KIAA0556O60303 1618 aa19.27■□□□□ 0.68
BRD3-206ENST00000494743 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
BRD3-206ENST00000494743 VPS8Q8N3P4 1428 aa19.24■□□□□ 0.67
BRD3-206ENST00000494743 PRG4Q92954 1404 aaPredicted RBP19.23■□□□□ 0.67
BRD3-206ENST00000494743 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
BRD3-206ENST00000494743 CARMIL2Q6F5E8 1435 aa19.22■□□□□ 0.67
BRD3-206ENST00000494743 KIF13AQ9H1H9 1805 aa19.18■□□□□ 0.66
BRD3-206ENST00000494743 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
BRD3-206ENST00000494743 ERCC6L2Q5T890 1561 aa19.17■□□□□ 0.66
BRD3-206ENST00000494743 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
BRD3-206ENST00000494743 PCF11O94913 1555 aaKnown RBP19.1■□□□□ 0.65
BRD3-206ENST00000494743 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
BRD3-206ENST00000494743 PTPRGP23470 1445 aa19.07■□□□□ 0.64
BRD3-206ENST00000494743 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
BRD3-206ENST00000494743 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
BRD3-206ENST00000494743 ABCA8O94911 1581 aa19.03■□□□□ 0.64
BRD3-206ENST00000494743 RAPGEF6Q8TEU7 1601 aa19.01■□□□□ 0.63
BRD3-206ENST00000494743 NUP153P49790 1475 aaKnown RBP19■□□□□ 0.63
BRD3-206ENST00000494743 HECW1Q76N89 1606 aa19■□□□□ 0.63
BRD3-206ENST00000494743 MAP3K1Q13233 1512 aa19■□□□□ 0.63
BRD3-206ENST00000494743 TTBK1Q5TCY1 1321 aaPredicted RBP19■□□□□ 0.63
BRD3-206ENST00000494743 UACAQ9BZF9 1416 aa18.98■□□□□ 0.63
BRD3-206ENST00000494743 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
BRD3-206ENST00000494743 CCDC18Q5T9S5 1454 aa18.96■□□□□ 0.63
BRD3-206ENST00000494743 UHRF1BP1LA0JNW5 1464 aa18.95■□□□□ 0.62
BRD3-206ENST00000494743 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
BRD3-206ENST00000494743 ABCC2Q92887 1545 aa18.95■□□□□ 0.62
BRD3-206ENST00000494743 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
BRD3-206ENST00000494743 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
BRD3-206ENST00000494743 KDM6BO15054 1643 aa18.92■□□□□ 0.62
BRD3-206ENST00000494743 ATP1B4Q9UN42 357 aaPredicted RBP18.92■□□□□ 0.62
BRD3-206ENST00000494743 APLP2Q06481 763 aa18.91■□□□□ 0.62
BRD3-206ENST00000494743 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
BRD3-206ENST00000494743 FAM69CQ0P6D2 419 aa18.88■□□□□ 0.61
BRD3-206ENST00000494743 ATP10BO94823 1461 aa18.88■□□□□ 0.61
BRD3-206ENST00000494743 ABCC10Q5T3U5 1492 aa18.88■□□□□ 0.61
BRD3-206ENST00000494743 LRRC9Q6ZRR7 1453 aa18.88■□□□□ 0.61
BRD3-206ENST00000494743 KANK4Q5T7N3 995 aaPredicted RBP18.87■□□□□ 0.61
BRD3-206ENST00000494743 ADCY10Q96PN6 1610 aa18.87■□□□□ 0.61
BRD3-206ENST00000494743 KDM5BQ9UGL1 1544 aa18.85■□□□□ 0.61
BRD3-206ENST00000494743 DIP2BQ9P265 1576 aa18.85■□□□□ 0.61
BRD3-206ENST00000494743 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
BRD3-206ENST00000494743 ARID3CA6NKF2 412 aa18.83■□□□□ 0.6
BRD3-206ENST00000494743 PPARGC1BQ86YN6 1023 aaKnown RBP18.83■□□□□ 0.6
BRD3-206ENST00000494743 EHBP1L1Q8N3D4 1523 aa18.8■□□□□ 0.6
BRD3-206ENST00000494743 TSPOAP1O95153 1857 aa18.8■□□□□ 0.6
BRD3-206ENST00000494743 MAPKBP1O60336 1514 aa18.79■□□□□ 0.6
BRD3-206ENST00000494743 HECW2Q9P2P5 1572 aa18.79■□□□□ 0.6
BRD3-206ENST00000494743 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
BRD3-206ENST00000494743 ZCCHC11Q5TAX3 1644 aaKnown RBP18.78■□□□□ 0.6
BRD3-206ENST00000494743 TROQ12816 1431 aaPredicted RBP18.76■□□□□ 0.59
BRD3-206ENST00000494743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
BRD3-206ENST00000494743 HNRNPUL2Q1KMD3 747 aaKnown RBP18.75■□□□□ 0.59
BRD3-206ENST00000494743 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
BRD3-206ENST00000494743 ADGRL1O94910 1474 aa18.74■□□□□ 0.59
BRD3-206ENST00000494743 NPM1P06748 294 aaKnown RBP eCLIP18.72■□□□□ 0.59
BRD3-206ENST00000494743 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
BRD3-206ENST00000494743 PLEKHD1A6NEE1 506 aa18.7■□□□□ 0.58
BRD3-206ENST00000494743 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
BRD3-206ENST00000494743 PHLDB1Q86UU1 1377 aa18.68■□□□□ 0.58
BRD3-206ENST00000494743 KIF14Q15058 1648 aa18.67■□□□□ 0.58
BRD3-206ENST00000494743 WDR7Q9Y4E6 1490 aa18.66■□□□□ 0.58
BRD3-206ENST00000494743 ASXL2Q76L83 1435 aa18.66■□□□□ 0.58
BRD3-206ENST00000494743 FBXO41Q8TF61 875 aa18.64■□□□□ 0.57
BRD3-206ENST00000494743 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
BRD3-206ENST00000494743 MYOM3Q5VTT5 1437 aa18.61■□□□□ 0.57
BRD3-206ENST00000494743 TRIM26Q12899 539 aaPredicted RBP18.59■□□□□ 0.57
BRD3-206ENST00000494743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.57
BRD3-206ENST00000494743 FGD6Q6ZV73 1430 aa18.57■□□□□ 0.56
BRD3-206ENST00000494743 TTC37Q6PGP7 1564 aa18.57■□□□□ 0.56
BRD3-206ENST00000494743 GPATCH8Q9UKJ3 1502 aaKnown RBP18.57■□□□□ 0.56
BRD3-206ENST00000494743 CCNB3Q8WWL7 1395 aa18.56■□□□□ 0.56
BRD3-206ENST00000494743 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
BRD3-206ENST00000494743 PPRC1Q5VV67 1664 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms