RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 KIF13AQ9H1H9 1805 aa25.83■■□□□ 1.73
PCCB-219ENST00000494742 CUL7Q14999 1698 aa25.78■■□□□ 1.72
PCCB-219ENST00000494742 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
PCCB-219ENST00000494742 KIAA0586Q9BVV6 1533 aa25.77■■□□□ 1.72
PCCB-219ENST00000494742 IGF1RP08069 1367 aa25.75■■□□□ 1.71
PCCB-219ENST00000494742 NPM1P06748 294 aaKnown RBP eCLIP25.73■■□□□ 1.71
PCCB-219ENST00000494742 MAPKBP1O60336 1514 aa25.73■■□□□ 1.71
PCCB-219ENST00000494742 ABCC10Q5T3U5 1492 aa25.7■■□□□ 1.7
PCCB-219ENST00000494742 ADCY10Q96PN6 1610 aa25.68■■□□□ 1.7
PCCB-219ENST00000494742 FAM69CQ0P6D2 419 aa25.63■■□□□ 1.69
PCCB-219ENST00000494742 DIP2BQ9P265 1576 aa25.62■■□□□ 1.69
PCCB-219ENST00000494742 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
PCCB-219ENST00000494742 PTPRGP23470 1445 aa25.53■■□□□ 1.68
PCCB-219ENST00000494742 CARMIL2Q6F5E8 1435 aa25.52■■□□□ 1.68
PCCB-219ENST00000494742 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
PCCB-219ENST00000494742 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
PCCB-219ENST00000494742 KDM6BO15054 1643 aa25.45■■□□□ 1.66
PCCB-219ENST00000494742 ABCC2Q92887 1545 aa25.43■■□□□ 1.66
PCCB-219ENST00000494742 UHRF1BP1LA0JNW5 1464 aa25.4■■□□□ 1.66
PCCB-219ENST00000494742 TSPOAP1O95153 1857 aa25.4■■□□□ 1.66
PCCB-219ENST00000494742 PLB1Q6P1J6 1458 aa25.37■■□□□ 1.65
PCCB-219ENST00000494742 DISP1Q96F81 1524 aa25.36■■□□□ 1.65
PCCB-219ENST00000494742 GLI2P10070 1586 aa25.35■■□□□ 1.65
PCCB-219ENST00000494742 RAPGEF2Q9Y4G8 1499 aa25.34■■□□□ 1.65
PCCB-219ENST00000494742 ASXL2Q76L83 1435 aa25.34■■□□□ 1.65
PCCB-219ENST00000494742 UACAQ9BZF9 1416 aa25.34■■□□□ 1.65
PCCB-219ENST00000494742 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
PCCB-219ENST00000494742 UGGT2Q9NYU1 1516 aa25.32■■□□□ 1.64
PCCB-219ENST00000494742 KDM5BQ9UGL1 1544 aa25.27■■□□□ 1.64
PCCB-219ENST00000494742 PPRC1Q5VV67 1664 aaKnown RBP25.26■■□□□ 1.63
PCCB-219ENST00000494742 KIAA0556O60303 1618 aa25.24■■□□□ 1.63
PCCB-219ENST00000494742 KDM4FA0A1W2PPD8 638 aa25.21■■□□□ 1.63
PCCB-219ENST00000494742 ZCCHC11Q5TAX3 1644 aaKnown RBP25.19■■□□□ 1.62
PCCB-219ENST00000494742 EPRSP07814 1512 aaKnown RBP25.19■■□□□ 1.62
PCCB-219ENST00000494742 MAP3K4Q9Y6R4 1608 aa25.19■■□□□ 1.62
PCCB-219ENST00000494742 CTTNBP2Q8WZ74 1663 aa25.18■■□□□ 1.62
PCCB-219ENST00000494742 TEX14Q8IWB6 1497 aa25.15■■□□□ 1.62
PCCB-219ENST00000494742 GOLGA3Q08378 1498 aa25.13■■□□□ 1.61
PCCB-219ENST00000494742 WDR7Q9Y4E6 1490 aa25.09■■□□□ 1.61
PCCB-219ENST00000494742 COL17A1Q9UMD9 1497 aaPredicted RBP25.06■■□□□ 1.6
PCCB-219ENST00000494742 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
PCCB-219ENST00000494742 ABCA8O94911 1581 aa25.03■■□□□ 1.6
PCCB-219ENST00000494742 ADGRL1O94910 1474 aa25■■□□□ 1.59
PCCB-219ENST00000494742 CFAP43Q8NDM7 1665 aa24.99■■□□□ 1.59
PCCB-219ENST00000494742 MAGI3Q5TCQ9 1506 aa24.97■■□□□ 1.59
PCCB-219ENST00000494742 CD109Q6YHK3 1445 aa24.94■■□□□ 1.58
PCCB-219ENST00000494742 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
PCCB-219ENST00000494742 KCNH8Q96L42 1107 aa24.87■■□□□ 1.57
PCCB-219ENST00000494742 SAMD9Q5K651 1589 aa24.8■■□□□ 1.56
PCCB-219ENST00000494742 ATP10BO94823 1461 aa24.8■■□□□ 1.56
PCCB-219ENST00000494742 CSRNP3Q8WYN3 585 aa24.79■■□□□ 1.56
PCCB-219ENST00000494742 ARAP3Q8WWN8 1544 aa24.79■■□□□ 1.56
PCCB-219ENST00000494742 PHLDB1Q86UU1 1377 aa24.76■■□□□ 1.55
PCCB-219ENST00000494742 ABCA9Q8IUA7 1624 aa24.75■■□□□ 1.55
PCCB-219ENST00000494742 P3H3Q8IVL6 736 aa24.75■■□□□ 1.55
PCCB-219ENST00000494742 RAPGEF6Q8TEU7 1601 aa24.73■■□□□ 1.55
PCCB-219ENST00000494742 EEA1Q15075 1411 aa24.72■■□□□ 1.55
PCCB-219ENST00000494742 HECW2Q9P2P5 1572 aa24.71■■□□□ 1.55
PCCB-219ENST00000494742 ARID3CA6NKF2 412 aa24.68■■□□□ 1.54
PCCB-219ENST00000494742 KIF21BO75037 1637 aa24.68■■□□□ 1.54
PCCB-219ENST00000494742 NEO1Q92859 1461 aa24.65■■□□□ 1.54
PCCB-219ENST00000494742 NUP153P49790 1475 aaKnown RBP24.62■■□□□ 1.53
PCCB-219ENST00000494742 ILDR1Q86SU0 546 aaPredicted RBP24.6■■□□□ 1.53
PCCB-219ENST00000494742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.59■■□□□ 1.53
PCCB-219ENST00000494742 HNRNPUL2Q1KMD3 747 aaKnown RBP24.59■■□□□ 1.53
PCCB-219ENST00000494742 FHOD3Q2V2M9 1422 aa24.55■■□□□ 1.52
PCCB-219ENST00000494742 EFCAB5A4FU69 1503 aa24.54■■□□□ 1.52
PCCB-219ENST00000494742 ADAMTSL3P82987 1691 aa24.53■■□□□ 1.52
PCCB-219ENST00000494742 RAPGEF3O95398 923 aa24.53■■□□□ 1.52
PCCB-219ENST00000494742 FRMPD1Q5SYB0 1578 aa24.52■■□□□ 1.52
PCCB-219ENST00000494742 PLEKHD1A6NEE1 506 aa24.52■■□□□ 1.52
PCCB-219ENST00000494742 CFAP74Q9C0B2 1584 aa24.49■■□□□ 1.51
PCCB-219ENST00000494742 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
PCCB-219ENST00000494742 PTPRMP28827 1452 aa24.47■■□□□ 1.51
PCCB-219ENST00000494742 BCORL1Q5H9F3 1711 aa24.47■■□□□ 1.51
PCCB-219ENST00000494742 DENND4BO75064 1496 aaPredicted RBP24.45■■□□□ 1.5
PCCB-219ENST00000494742 RICTORQ6R327 1708 aa24.44■■□□□ 1.5
PCCB-219ENST00000494742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.43■■□□□ 1.5
PCCB-219ENST00000494742 FANCAO15360 1455 aa24.43■■□□□ 1.5
PCCB-219ENST00000494742 AKNAQ7Z591 1439 aa24.43■■□□□ 1.5
PCCB-219ENST00000494742 ARHGEF40Q8TER5 1519 aa24.42■■□□□ 1.5
PCCB-219ENST00000494742 ARID4BQ4LE39 1312 aaPredicted RBP24.38■■□□□ 1.49
PCCB-219ENST00000494742 MADDQ8WXG6 1647 aa24.38■■□□□ 1.49
PCCB-219ENST00000494742 TTC37Q6PGP7 1564 aa24.37■■□□□ 1.49
PCCB-219ENST00000494742 ZMYM4Q5VZL5 1548 aa24.37■■□□□ 1.49
PCCB-219ENST00000494742 MAGI2Q86UL8 1455 aa24.33■■□□□ 1.49
PCCB-219ENST00000494742 CDK13Q14004 1512 aaKnown RBP24.33■■□□□ 1.49
PCCB-219ENST00000494742 FMN1Q68DA7 1419 aa24.32■■□□□ 1.48
PCCB-219ENST00000494742 PCF11O94913 1555 aaKnown RBP24.3■■□□□ 1.48
PCCB-219ENST00000494742 PLCH2O75038 1416 aa24.3■■□□□ 1.48
PCCB-219ENST00000494742 POGZQ7Z3K3 1410 aa24.3■■□□□ 1.48
PCCB-219ENST00000494742 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
PCCB-219ENST00000494742 HECW1Q76N89 1606 aa24.29■■□□□ 1.48
PCCB-219ENST00000494742 RIMS1Q86UR5 1692 aaKnown RBP24.29■■□□□ 1.48
PCCB-219ENST00000494742 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
PCCB-219ENST00000494742 LMTK3Q96Q04 1460 aa24.26■■□□□ 1.47
PCCB-219ENST00000494742 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
PCCB-219ENST00000494742 SCAPERQ9BY12 1400 aa24.24■■□□□ 1.47
PCCB-219ENST00000494742 YEATS2Q9ULM3 1422 aa24.24■■□□□ 1.47
PCCB-219ENST00000494742 ARHGAP35Q9NRY4 1499 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms