RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 TRIM41Q8WV44 630 aa5.86□□□□□ -1.47
ATG3-207ENST00000494571 U3KPZ7 1027 aaPredicted RBP5.86□□□□□ -1.47
ATG3-207ENST00000494571 ZNF316A6NFI3 1004 aaPredicted RBP5.85□□□□□ -1.47
ATG3-207ENST00000494571 ERICH6BQ5W0A0 696 aa5.84□□□□□ -1.47
ATG3-207ENST00000494571 CC2D2AQ9P2K1 1620 aa5.84□□□□□ -1.47
ATG3-207ENST00000494571 POTEMA6NI47 508 aa5.83□□□□□ -1.48
ATG3-207ENST00000494571 TIMELESSQ9UNS1 1208 aa5.83□□□□□ -1.48
ATG3-207ENST00000494571 EIF4G1Q04637 1599 aaKnown RBP5.82□□□□□ -1.48
ATG3-207ENST00000494571 FKBP8Q14318 412 aa5.82□□□□□ -1.48
ATG3-207ENST00000494571 CECR2Q9BXF3 1484 aa5.81□□□□□ -1.48
ATG3-207ENST00000494571 MYT1LQ9UL68 1186 aa5.8□□□□□ -1.48
ATG3-207ENST00000494571 CLSPNQ9HAW4 1339 aa5.8□□□□□ -1.48
ATG3-207ENST00000494571 VSIG10Q8N0Z9 540 aa5.79□□□□□ -1.48
ATG3-207ENST00000494571 POTEGQ6S5H5 508 aa5.78□□□□□ -1.48
ATG3-207ENST00000494571 CLCN6P51797 869 aa5.78□□□□□ -1.48
ATG3-207ENST00000494571 ZMYND15Q9H091 742 aa5.77□□□□□ -1.49
ATG3-207ENST00000494571 NEFLP07196 543 aa5.77□□□□□ -1.49
ATG3-207ENST00000494571 GABBR2O75899 941 aa5.76□□□□□ -1.49
ATG3-207ENST00000494571 RTL5Q5HYW3 569 aaPredicted RBP5.76□□□□□ -1.49
ATG3-207ENST00000494571 NPM3O75607 178 aaKnown RBP5.75□□□□□ -1.49
ATG3-207ENST00000494571 PDE4CQ08493 712 aa5.75□□□□□ -1.49
ATG3-207ENST00000494571 EVX2Q03828 476 aa5.75□□□□□ -1.49
ATG3-207ENST00000494571 GLIPR1L2Q4G1C9 344 aa5.74□□□□□ -1.49
ATG3-207ENST00000494571 BCL11BQ9C0K0 894 aaPredicted RBP5.72□□□□□ -1.49
ATG3-207ENST00000494571 HMGXB3Q12766 1538 aa5.72□□□□□ -1.49
ATG3-207ENST00000494571 ABCB7O75027 752 aa5.72□□□□□ -1.49
ATG3-207ENST00000494571 C19orf67A6NJJ6 358 aa5.71□□□□□ -1.5
ATG3-207ENST00000494571 FANCIQ9NVI1 1328 aa5.71□□□□□ -1.5
ATG3-207ENST00000494571 PDIA4P13667 645 aaKnown RBP5.71□□□□□ -1.5
ATG3-207ENST00000494571 SMARCA2P51531 1590 aa5.71□□□□□ -1.5
ATG3-207ENST00000494571 CDK11AQ9UQ88 783 aaPredicted RBP5.69□□□□□ -1.5
ATG3-207ENST00000494571 ZCCHC6Q5VYS8 1495 aaKnown RBP5.69□□□□□ -1.5
ATG3-207ENST00000494571 RBM10P98175 930 aaKnown RBP5.69□□□□□ -1.5
ATG3-207ENST00000494571 TRHP20396 242 aaPredicted RBP5.68□□□□□ -1.5
ATG3-207ENST00000494571 REM2Q8IYK8 340 aaPredicted RBP5.68□□□□□ -1.5
ATG3-207ENST00000494571 PAK3O75914 559 aaPredicted RBP5.68□□□□□ -1.5
ATG3-207ENST00000494571 NOP58Q9Y2X3 529 aaKnown RBP5.68□□□□□ -1.5
ATG3-207ENST00000494571 FGD1P98174 961 aa5.67□□□□□ -1.5
ATG3-207ENST00000494571 KLHL34Q8N239 644 aa5.67□□□□□ -1.5
ATG3-207ENST00000494571 BRPF3Q9ULD4 1205 aa5.67□□□□□ -1.5
ATG3-207ENST00000494571 NCAPD3P42695 1498 aa5.67□□□□□ -1.5
ATG3-207ENST00000494571 KCNH8Q96L42 1107 aa5.67□□□□□ -1.5
ATG3-207ENST00000494571 IRX6P78412 446 aaPredicted RBP5.66□□□□□ -1.5
ATG3-207ENST00000494571 HNRNPUL2Q1KMD3 747 aaKnown RBP5.66□□□□□ -1.5
ATG3-207ENST00000494571 PEG3Q9GZU2 1588 aa5.65□□□□□ -1.5
ATG3-207ENST00000494571 THOC2Q8NI27 1593 aaKnown RBP5.65□□□□□ -1.5
ATG3-207ENST00000494571 AAMPQ13685 434 aa5.65□□□□□ -1.51
ATG3-207ENST00000494571 LAMC3Q9Y6N6 1575 aa5.64□□□□□ -1.51
ATG3-207ENST00000494571 NCBP3Q53F19 620 aaKnown RBP5.63□□□□□ -1.51
ATG3-207ENST00000494571 NEFMP07197 916 aa5.61□□□□□ -1.51
ATG3-207ENST00000494571 RSPH6AQ9H0K4 717 aa5.61□□□□□ -1.51
ATG3-207ENST00000494571 TRIM52Q96A61 297 aa5.61□□□□□ -1.51
ATG3-207ENST00000494571 LAS1LQ9Y4W2 734 aaKnown RBP5.61□□□□□ -1.51
ATG3-207ENST00000494571 RANGAP1P46060 587 aaPredicted RBP5.6□□□□□ -1.51
ATG3-207ENST00000494571 PAXIP1Q6ZW49 1069 aaPredicted RBP5.6□□□□□ -1.51
ATG3-207ENST00000494571 ARID4BQ4LE39 1312 aaPredicted RBP5.58□□□□□ -1.52
ATG3-207ENST00000494571 ZBTB47Q9UFB7 747 aaPredicted RBP5.58□□□□□ -1.52
ATG3-207ENST00000494571 HSP90AA2PQ14568 343 aaPredicted RBP5.58□□□□□ -1.52
ATG3-207ENST00000494571 C11orf95C9JLR9 678 aaPredicted RBP5.57□□□□□ -1.52
ATG3-207ENST00000494571 PITPNM1O00562 1244 aa5.57□□□□□ -1.52
ATG3-207ENST00000494571 ANP32AP39687 249 aaKnown RBP5.56□□□□□ -1.52
ATG3-207ENST00000494571 WDR97A6NE52 1622 aa5.56□□□□□ -1.52
ATG3-207ENST00000494571 NPM2Q86SE8 214 aaKnown RBP5.55□□□□□ -1.52
ATG3-207ENST00000494571 WDR62O43379 1518 aa5.55□□□□□ -1.52
ATG3-207ENST00000494571 NAP1L5Q96NT1 182 aaPredicted RBP5.55□□□□□ -1.52
ATG3-207ENST00000494571 BAZ1BQ9UIG0 1483 aaKnown RBP5.55□□□□□ -1.52
ATG3-207ENST00000494571 POTEIP0CG38 1075 aa5.55□□□□□ -1.52
ATG3-207ENST00000494571 OTUD5Q96G74 571 aa5.55□□□□□ -1.52
ATG3-207ENST00000494571 CHMP4BQ9H444 224 aaKnown RBP5.54□□□□□ -1.52
ATG3-207ENST00000494571 TAF7LQ5H9L4 462 aa5.54□□□□□ -1.52
ATG3-207ENST00000494571 RGS3P49796 1198 aa5.53□□□□□ -1.52
ATG3-207ENST00000494571 B4GALNT3Q6L9W6 998 aa5.53□□□□□ -1.52
ATG3-207ENST00000494571 DHX37Q8IY37 1157 aaKnown RBP5.53□□□□□ -1.52
ATG3-207ENST00000494571 SLC4A2P04920 1241 aa5.52□□□□□ -1.53
ATG3-207ENST00000494571 ZBTB12Q9Y330 459 aaPredicted RBP5.52□□□□□ -1.53
ATG3-207ENST00000494571 HSP90AA1P07900 732 aaKnown RBP5.52□□□□□ -1.53
ATG3-207ENST00000494571 BBXQ8WY36 941 aaPredicted RBP5.52□□□□□ -1.53
ATG3-207ENST00000494571 IPO9Q96P70 1041 aaKnown RBP5.52□□□□□ -1.53
ATG3-207ENST00000494571 NAP1L2Q9ULW6 460 aaPredicted RBP5.51□□□□□ -1.53
ATG3-207ENST00000494571 SAMD1Q6SPF0 538 aaPredicted RBP5.51□□□□□ -1.53
ATG3-207ENST00000494571 ZBTB22O15209 634 aa5.5□□□□□ -1.53
ATG3-207ENST00000494571 WASHC2AQ641Q2 1341 aa5.5□□□□□ -1.53
ATG3-207ENST00000494571 GSE1Q14687 1217 aa5.5□□□□□ -1.53
ATG3-207ENST00000494571 AMER1Q5JTC6 1135 aaPredicted RBP5.5□□□□□ -1.53
ATG3-207ENST00000494571 WASHC2CQ9Y4E1 1318 aa5.49□□□□□ -1.53
ATG3-207ENST00000494571 ARXQ96QS3 562 aa5.49□□□□□ -1.53
ATG3-207ENST00000494571 RRP9O43818 475 aaKnown RBP5.48□□□□□ -1.53
ATG3-207ENST00000494571 FAM43AQ8N2R8 423 aa5.48□□□□□ -1.53
ATG3-207ENST00000494571 FRAT1Q92837 279 aaPredicted RBP5.48□□□□□ -1.53
ATG3-207ENST00000494571 USP35Q9P2H5 1018 aa5.48□□□□□ -1.53
ATG3-207ENST00000494571 ERCC6Q03468 1493 aa5.48□□□□□ -1.53
ATG3-207ENST00000494571 BAZ1AQ9NRL2 1556 aaPredicted RBP5.48□□□□□ -1.53
ATG3-207ENST00000494571 SCRIBQ14160 1630 aa5.47□□□□□ -1.53
ATG3-207ENST00000494571 PDS5BQ9NTI5 1447 aa5.47□□□□□ -1.53
ATG3-207ENST00000494571 PLCD3Q8N3E9 789 aa5.47□□□□□ -1.53
ATG3-207ENST00000494571 DDX10Q13206 875 aaKnown RBP5.46□□□□□ -1.53
ATG3-207ENST00000494571 MRC2Q9UBG0 1479 aa5.46□□□□□ -1.54
ATG3-207ENST00000494571 HAP1P54257 671 aaPredicted RBP5.45□□□□□ -1.54
ATG3-207ENST00000494571 ARID3AQ99856 593 aa5.45□□□□□ -1.54
ATG3-207ENST00000494571 PPP4R2Q9NY27 417 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms