RNA–Protein interactions for RNA: ENST00000494531.1

LCP1-207, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-207ENST00000494531 WDR62O43379 1518 aa15.31■□□□□ 0.04
LCP1-207ENST00000494531 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
LCP1-207ENST00000494531 CFTRP13569 1480 aa15.28■□□□□ 0.04
LCP1-207ENST00000494531 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
LCP1-207ENST00000494531 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
LCP1-207ENST00000494531 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
LCP1-207ENST00000494531 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
LCP1-207ENST00000494531 FBXO3Q9UK99 471 aa15.11■□□□□ 0.01
LCP1-207ENST00000494531 AKT1S1Q96B36 256 aa15.06■□□□□ 0
LCP1-207ENST00000494531 TRIM41Q8WV44 630 aa15.02■□□□□ -0
LCP1-207ENST00000494531 ABCC8Q09428 1581 aa15.02□□□□□ -0.01
LCP1-207ENST00000494531 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
LCP1-207ENST00000494531 VASPP50552 380 aaPredicted RBP15.01□□□□□ -0.01
LCP1-207ENST00000494531 TOPBP1Q92547 1522 aa15□□□□□ -0.01
LCP1-207ENST00000494531 DNMBPQ6XZF7 1577 aa14.96□□□□□ -0.01
LCP1-207ENST00000494531 REM2Q8IYK8 340 aaPredicted RBP14.96□□□□□ -0.01
LCP1-207ENST00000494531 ZNF608Q9ULD9 1512 aaPredicted RBP14.94□□□□□ -0.02
LCP1-207ENST00000494531 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
LCP1-207ENST00000494531 EIF4G3O43432 1585 aaKnown RBP14.89□□□□□ -0.03
LCP1-207ENST00000494531 IFNLR1Q8IU57 520 aaPredicted RBP14.87□□□□□ -0.03
LCP1-207ENST00000494531 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
LCP1-207ENST00000494531 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
LCP1-207ENST00000494531 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
LCP1-207ENST00000494531 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
LCP1-207ENST00000494531 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.044e-7■■■□□ 16.2
LCP1-207ENST00000494531 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
LCP1-207ENST00000494531 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
LCP1-207ENST00000494531 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
LCP1-207ENST00000494531 SOGA1O94964 1423 aa14.79□□□□□ -0.04
LCP1-207ENST00000494531 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
LCP1-207ENST00000494531 RAD54L2Q9Y4B4 1467 aa14.77□□□□□ -0.04
LCP1-207ENST00000494531 AMER1Q5JTC6 1135 aaPredicted RBP14.77□□□□□ -0.05
LCP1-207ENST00000494531 CHD1O14646 1710 aa14.77□□□□□ -0.05
LCP1-207ENST00000494531 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
LCP1-207ENST00000494531 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
LCP1-207ENST00000494531 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
LCP1-207ENST00000494531 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
LCP1-207ENST00000494531 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
LCP1-207ENST00000494531 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
LCP1-207ENST00000494531 CUX1P39880 1505 aa14.73□□□□□ -0.05
LCP1-207ENST00000494531 MIER1Q8N108 512 aa14.7□□□□□ -0.06
LCP1-207ENST00000494531 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
LCP1-207ENST00000494531 SNAPC4Q5SXM2 1469 aa14.69□□□□□ -0.06
LCP1-207ENST00000494531 MAGI1Q96QZ7 1491 aaPredicted RBP14.68□□□□□ -0.06
LCP1-207ENST00000494531 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
LCP1-207ENST00000494531 GRIN2BQ13224 1484 aa14.67□□□□□ -0.06
LCP1-207ENST00000494531 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
LCP1-207ENST00000494531 CYB5RLQ6IPT4 315 aa14.66□□□□□ -0.06
LCP1-207ENST00000494531 CREBZFQ9NS37 354 aa14.64□□□□□ -0.07
LCP1-207ENST00000494531 SYNJ1O43426 1573 aa14.63□□□□□ -0.07
LCP1-207ENST00000494531 SYNJ2O15056 1496 aa14.62□□□□□ -0.07
LCP1-207ENST00000494531 GAPVD1Q14C86 1478 aa14.62□□□□□ -0.07
LCP1-207ENST00000494531 ARAP1Q96P48 1450 aa14.6□□□□□ -0.07
LCP1-207ENST00000494531 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
LCP1-207ENST00000494531 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
LCP1-207ENST00000494531 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.08
LCP1-207ENST00000494531 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
LCP1-207ENST00000494531 KLHL34Q8N239 644 aa14.58□□□□□ -0.08
LCP1-207ENST00000494531 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
LCP1-207ENST00000494531 ABCA5Q8WWZ7 1642 aa14.56□□□□□ -0.08
LCP1-207ENST00000494531 SPOCK2Q92563 424 aa14.56□□□□□ -0.08
LCP1-207ENST00000494531 TOP2BQ02880 1626 aa14.53□□□□□ -0.08
LCP1-207ENST00000494531 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.08
LCP1-207ENST00000494531 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
LCP1-207ENST00000494531 PLEKHG5O94827 1062 aa14.49□□□□□ -0.09
LCP1-207ENST00000494531 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.096e-10■■■■■ 31
LCP1-207ENST00000494531 PKD2Q13563 968 aa14.48□□□□□ -0.09
LCP1-207ENST00000494531 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
LCP1-207ENST00000494531 CHADLQ6NUI6 762 aa14.47□□□□□ -0.09
LCP1-207ENST00000494531 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
LCP1-207ENST00000494531 ADAMTS12P58397 1594 aa14.46□□□□□ -0.09
LCP1-207ENST00000494531 FHAD1B1AJZ9 1412 aa14.44□□□□□ -0.1
LCP1-207ENST00000494531 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
LCP1-207ENST00000494531 NUBP1P53384 320 aa14.43□□□□□ -0.1
LCP1-207ENST00000494531 NUP160Q12769 1436 aa14.41□□□□□ -0.1
LCP1-207ENST00000494531 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
LCP1-207ENST00000494531 CEP170Q5SW79 1584 aa14.39□□□□□ -0.11
LCP1-207ENST00000494531 PRKAR2AP13861 404 aaKnown RBP14.38□□□□□ -0.11
LCP1-207ENST00000494531 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
LCP1-207ENST00000494531 ERCC6L2Q5T890 1561 aa14.33□□□□□ -0.12
LCP1-207ENST00000494531 SHROOM2Q13796 1616 aa14.33□□□□□ -0.12
LCP1-207ENST00000494531 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
LCP1-207ENST00000494531 PRG4Q92954 1404 aaPredicted RBP14.29□□□□□ -0.12
LCP1-207ENST00000494531 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
LCP1-207ENST00000494531 JPH4Q96JJ6 628 aa14.27□□□□□ -0.13
LCP1-207ENST00000494531 CIZ1Q9ULV3 898 aaPredicted RBP14.26□□□□□ -0.13
LCP1-207ENST00000494531 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
LCP1-207ENST00000494531 NPM1P06748 294 aaKnown RBP eCLIP14.25□□□□□ -0.13
LCP1-207ENST00000494531 CUL7Q14999 1698 aa14.24□□□□□ -0.13
LCP1-207ENST00000494531 ECM2O94769 699 aaPredicted RBP14.23□□□□□ -0.13
LCP1-207ENST00000494531 IGF1RP08069 1367 aa14.22□□□□□ -0.13
LCP1-207ENST00000494531 GSE1Q14687 1217 aa14.2□□□□□ -0.14
LCP1-207ENST00000494531 KIAA0586Q9BVV6 1533 aa14.2□□□□□ -0.14
LCP1-207ENST00000494531 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
LCP1-207ENST00000494531 DCAF8Q5TAQ9 597 aa14.18□□□□□ -0.14
LCP1-207ENST00000494531 RGL2O15211 777 aa14.17□□□□□ -0.14
LCP1-207ENST00000494531 CARMIL1Q5VZK9 1371 aa14.16□□□□□ -0.14
LCP1-207ENST00000494531 RNF25Q96BH1 459 aaPredicted RBP14.12□□□□□ -0.15
LCP1-207ENST00000494531 KIF13AQ9H1H9 1805 aa14.11□□□□□ -0.15
LCP1-207ENST00000494531 CARMIL2Q6F5E8 1435 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms