RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
PMP22-206ENST00000494511 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
PMP22-206ENST00000494511 PRG4Q92954 1404 aaPredicted RBP24.68■■□□□ 1.54
PMP22-206ENST00000494511 KIAA0586Q9BVV6 1533 aa24.6■■□□□ 1.53
PMP22-206ENST00000494511 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
PMP22-206ENST00000494511 KIF13AQ9H1H9 1805 aa24.53■■□□□ 1.52
PMP22-206ENST00000494511 RAPGEF2Q9Y4G8 1499 aa24.49■■□□□ 1.51
PMP22-206ENST00000494511 IQGAP2Q13576 1575 aa24.43■■□□□ 1.5
PMP22-206ENST00000494511 TTBK1Q5TCY1 1321 aaPredicted RBP24.41■■□□□ 1.5
PMP22-206ENST00000494511 CARMIL2Q6F5E8 1435 aa24.35■■□□□ 1.49
PMP22-206ENST00000494511 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.49
PMP22-206ENST00000494511 PTPRGP23470 1445 aa24.33■■□□□ 1.49
PMP22-206ENST00000494511 NPM1P06748 294 aaKnown RBP eCLIP24.31■■□□□ 1.48
PMP22-206ENST00000494511 PRXQ9BXM0 1461 aa24.31■■□□□ 1.48
PMP22-206ENST00000494511 TNIKQ9UKE5 1360 aa24.3■■□□□ 1.48
PMP22-206ENST00000494511 DISP1Q96F81 1524 aa24.29■■□□□ 1.48
PMP22-206ENST00000494511 CTTNBP2Q8WZ74 1663 aa24.28■■□□□ 1.48
PMP22-206ENST00000494511 MAPKBP1O60336 1514 aa24.27■■□□□ 1.48
PMP22-206ENST00000494511 UGGT2Q9NYU1 1516 aa24.27■■□□□ 1.48
PMP22-206ENST00000494511 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
PMP22-206ENST00000494511 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
PMP22-206ENST00000494511 DIP2BQ9P265 1576 aa24.25■■□□□ 1.47
PMP22-206ENST00000494511 FAM9AQ8IZU1 332 aaPredicted RBP24.23■■□□□ 1.47
PMP22-206ENST00000494511 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
PMP22-206ENST00000494511 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
PMP22-206ENST00000494511 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
PMP22-206ENST00000494511 EEA1Q15075 1411 aa24.16■■□□□ 1.46
PMP22-206ENST00000494511 UACAQ9BZF9 1416 aa24.14■■□□□ 1.45
PMP22-206ENST00000494511 ABCC2Q92887 1545 aa24.13■■□□□ 1.45
PMP22-206ENST00000494511 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
PMP22-206ENST00000494511 KDM6BO15054 1643 aa24.11■■□□□ 1.45
PMP22-206ENST00000494511 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
PMP22-206ENST00000494511 UHRF1BP1LA0JNW5 1464 aa24.1■■□□□ 1.45
PMP22-206ENST00000494511 P3H3Q8IVL6 736 aa24.05■■□□□ 1.44
PMP22-206ENST00000494511 ASXL2Q76L83 1435 aa24.03■■□□□ 1.44
PMP22-206ENST00000494511 PLB1Q6P1J6 1458 aa24.03■■□□□ 1.44
PMP22-206ENST00000494511 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
PMP22-206ENST00000494511 KDM5BQ9UGL1 1544 aa24■■□□□ 1.43
PMP22-206ENST00000494511 EHMT2Q96KQ7 1210 aa24■■□□□ 1.43
PMP22-206ENST00000494511 ZCCHC11Q5TAX3 1644 aaKnown RBP23.99■■□□□ 1.43
PMP22-206ENST00000494511 KIF21BO75037 1637 aa23.97■■□□□ 1.43
PMP22-206ENST00000494511 ABCA8O94911 1581 aa23.95■■□□□ 1.43
PMP22-206ENST00000494511 PPRC1Q5VV67 1664 aaKnown RBP23.93■■□□□ 1.42
PMP22-206ENST00000494511 SAMD9Q5K651 1589 aa23.93■■□□□ 1.42
PMP22-206ENST00000494511 KDM4FA0A1W2PPD8 638 aa23.92■■□□□ 1.42
PMP22-206ENST00000494511 GLI2P10070 1586 aa23.9■■□□□ 1.42
PMP22-206ENST00000494511 ARID3CA6NKF2 412 aa23.89■■□□□ 1.41
PMP22-206ENST00000494511 EPRSP07814 1512 aaKnown RBP23.88■■□□□ 1.41
PMP22-206ENST00000494511 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
PMP22-206ENST00000494511 FHOD3Q2V2M9 1422 aa23.84■■□□□ 1.41
PMP22-206ENST00000494511 WDR7Q9Y4E6 1490 aa23.84■■□□□ 1.41
PMP22-206ENST00000494511 KCNH8Q96L42 1107 aa23.82■■□□□ 1.4
PMP22-206ENST00000494511 RAPGEF6Q8TEU7 1601 aa23.79■■□□□ 1.4
PMP22-206ENST00000494511 MAP3K4Q9Y6R4 1608 aa23.79■■□□□ 1.4
PMP22-206ENST00000494511 ATP10BO94823 1461 aa23.77■■□□□ 1.4
PMP22-206ENST00000494511 EFCAB5A4FU69 1503 aa23.75■■□□□ 1.39
PMP22-206ENST00000494511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.73■■□□□ 1.39
PMP22-206ENST00000494511 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
PMP22-206ENST00000494511 ADGRL1O94910 1474 aa23.7■■□□□ 1.38
PMP22-206ENST00000494511 NUP153P49790 1475 aaKnown RBP23.69■■□□□ 1.38
PMP22-206ENST00000494511 COL17A1Q9UMD9 1497 aaPredicted RBP23.69■■□□□ 1.38
PMP22-206ENST00000494511 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
PMP22-206ENST00000494511 CD109Q6YHK3 1445 aa23.67■■□□□ 1.38
PMP22-206ENST00000494511 CFAP43Q8NDM7 1665 aa23.67■■□□□ 1.38
PMP22-206ENST00000494511 ARHGAP35Q9NRY4 1499 aa23.63■■□□□ 1.37
PMP22-206ENST00000494511 MAGI3Q5TCQ9 1506 aa23.59■■□□□ 1.37
PMP22-206ENST00000494511 ATP1B4Q9UN42 357 aaPredicted RBP23.59■■□□□ 1.37
PMP22-206ENST00000494511 PLEKHD1A6NEE1 506 aa23.55■■□□□ 1.36
PMP22-206ENST00000494511 FMN1Q68DA7 1419 aa23.55■■□□□ 1.36
PMP22-206ENST00000494511 ABCA9Q8IUA7 1624 aa23.55■■□□□ 1.36
PMP22-206ENST00000494511 CDK13Q14004 1512 aaKnown RBP23.54■■□□□ 1.36
PMP22-206ENST00000494511 HECW2Q9P2P5 1572 aa23.51■■□□□ 1.35
PMP22-206ENST00000494511 ILDR1Q86SU0 546 aaPredicted RBP23.5■■□□□ 1.35
PMP22-206ENST00000494511 HECW1Q76N89 1606 aa23.48■■□□□ 1.35
PMP22-206ENST00000494511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.41■■□□□ 1.34
PMP22-206ENST00000494511 CLIP1P30622 1438 aa23.41■■□□□ 1.34
PMP22-206ENST00000494511 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
PMP22-206ENST00000494511 ARAP3Q8WWN8 1544 aa23.4■■□□□ 1.34
PMP22-206ENST00000494511 LRRIQ1Q96JM4 1722 aa23.39■■□□□ 1.34
PMP22-206ENST00000494511 NEO1Q92859 1461 aa23.38■■□□□ 1.33
PMP22-206ENST00000494511 PCF11O94913 1555 aaKnown RBP23.37■■□□□ 1.33
PMP22-206ENST00000494511 CDK11AQ9UQ88 783 aaPredicted RBP23.37■■□□□ 1.33
PMP22-206ENST00000494511 PHLDB1Q86UU1 1377 aa23.37■■□□□ 1.33
PMP22-206ENST00000494511 RAPGEF3O95398 923 aa23.36■■□□□ 1.33
PMP22-206ENST00000494511 CASKIN1Q8WXD9 1431 aa23.34■■□□□ 1.33
PMP22-206ENST00000494511 FANCAO15360 1455 aa23.31■■□□□ 1.32
PMP22-206ENST00000494511 KIF14Q15058 1648 aa23.3■■□□□ 1.32
PMP22-206ENST00000494511 TROQ12816 1431 aaPredicted RBP23.3■■□□□ 1.32
PMP22-206ENST00000494511 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
PMP22-206ENST00000494511 CFAP74Q9C0B2 1584 aa23.27■■□□□ 1.32
PMP22-206ENST00000494511 CCDC18Q5T9S5 1454 aa23.27■■□□□ 1.32
PMP22-206ENST00000494511 FYCO1Q9BQS8 1478 aa23.27■■□□□ 1.32
PMP22-206ENST00000494511 FRMPD1Q5SYB0 1578 aa23.27■■□□□ 1.32
PMP22-206ENST00000494511 PLCH2O75038 1416 aa23.25■■□□□ 1.31
PMP22-206ENST00000494511 MYO5CQ9NQX4 1742 aa23.25■■□□□ 1.31
PMP22-206ENST00000494511 DENND4BO75064 1496 aaPredicted RBP23.24■■□□□ 1.31
PMP22-206ENST00000494511 LOC105371045A0A1W2PR82 267 aa23.24■■□□□ 1.31
PMP22-206ENST00000494511 CEP162Q5TB80 1403 aa23.24■■□□□ 1.31
PMP22-206ENST00000494511 ADAMTSL3P82987 1691 aa23.22■■□□□ 1.31
PMP22-206ENST00000494511 RICTORQ6R327 1708 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms