RNA–Protein interactions for RNA: ENST00000493878.1

GATAD1-203, Transcript of GATA zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene GATAD1, Length 2,017 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATAD1-203ENST00000493878 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.362e-8■■□□□ 13.4
GATAD1-203ENST00000493878 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
GATAD1-203ENST00000493878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
GATAD1-203ENST00000493878 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
GATAD1-203ENST00000493878 CFAP43Q8NDM7 1665 aa17.24■□□□□ 0.35
GATAD1-203ENST00000493878 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
GATAD1-203ENST00000493878 CUL7Q14999 1698 aa17.23■□□□□ 0.35
GATAD1-203ENST00000493878 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
GATAD1-203ENST00000493878 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
GATAD1-203ENST00000493878 CASKIN1Q8WXD9 1431 aa17.19■□□□□ 0.34
GATAD1-203ENST00000493878 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
GATAD1-203ENST00000493878 PHLDB1Q86UU1 1377 aa17.18■□□□□ 0.34
GATAD1-203ENST00000493878 PCF11O94913 1555 aaKnown RBP17.17■□□□□ 0.34
GATAD1-203ENST00000493878 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
GATAD1-203ENST00000493878 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
GATAD1-203ENST00000493878 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
GATAD1-203ENST00000493878 TIMELESSQ9UNS1 1208 aa17.14■□□□□ 0.34
GATAD1-203ENST00000493878 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
GATAD1-203ENST00000493878 FMN1Q68DA7 1419 aa17.12■□□□□ 0.33
GATAD1-203ENST00000493878 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
GATAD1-203ENST00000493878 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
GATAD1-203ENST00000493878 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.33
GATAD1-203ENST00000493878 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
GATAD1-203ENST00000493878 NESP48681 1621 aa17.07■□□□□ 0.32
GATAD1-203ENST00000493878 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
GATAD1-203ENST00000493878 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
GATAD1-203ENST00000493878 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
GATAD1-203ENST00000493878 YTHDC1Q96MU7 727 aaKnown RBP17.04■□□□□ 0.32
GATAD1-203ENST00000493878 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
GATAD1-203ENST00000493878 ITGAEP38570 1179 aa17.01■□□□□ 0.31
GATAD1-203ENST00000493878 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
GATAD1-203ENST00000493878 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
GATAD1-203ENST00000493878 GRIN2BQ13224 1484 aa16.98■□□□□ 0.31
GATAD1-203ENST00000493878 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
GATAD1-203ENST00000493878 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
GATAD1-203ENST00000493878 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
GATAD1-203ENST00000493878 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
GATAD1-203ENST00000493878 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
GATAD1-203ENST00000493878 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
GATAD1-203ENST00000493878 EHBP1L1Q8N3D4 1523 aa16.92■□□□□ 0.3
GATAD1-203ENST00000493878 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
GATAD1-203ENST00000493878 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
GATAD1-203ENST00000493878 MYOM3Q5VTT5 1437 aa16.91■□□□□ 0.3
GATAD1-203ENST00000493878 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
GATAD1-203ENST00000493878 PPP1R15AO75807 674 aaPredicted RBP16.9■□□□□ 0.3
GATAD1-203ENST00000493878 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
GATAD1-203ENST00000493878 NCOA2Q15596 1464 aa16.89■□□□□ 0.29
GATAD1-203ENST00000493878 CCDC18Q5T9S5 1454 aa16.89■□□□□ 0.29
GATAD1-203ENST00000493878 SIN3AQ96ST3 1273 aa16.87■□□□□ 0.29
GATAD1-203ENST00000493878 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
GATAD1-203ENST00000493878 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
GATAD1-203ENST00000493878 UGGT2Q9NYU1 1516 aa16.87■□□□□ 0.29
GATAD1-203ENST00000493878 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
GATAD1-203ENST00000493878 SUPT6HQ7KZ85 1726 aaKnown RBP16.86■□□□□ 0.29
GATAD1-203ENST00000493878 PTPN23Q9H3S7 1636 aa16.86■□□□□ 0.29
GATAD1-203ENST00000493878 ANP32EQ9BTT0 268 aa16.86■□□□□ 0.29
GATAD1-203ENST00000493878 LRRIQ1Q96JM4 1722 aa16.85■□□□□ 0.29
GATAD1-203ENST00000493878 NAIPQ13075 1403 aa16.85■□□□□ 0.29
GATAD1-203ENST00000493878 AKNAQ7Z591 1439 aa16.85■□□□□ 0.29
GATAD1-203ENST00000493878 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
GATAD1-203ENST00000493878 MIA2Q96PC5 1412 aa16.79■□□□□ 0.28
GATAD1-203ENST00000493878 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
GATAD1-203ENST00000493878 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
GATAD1-203ENST00000493878 MAGI3Q5TCQ9 1506 aa16.78■□□□□ 0.28
GATAD1-203ENST00000493878 CCER2I3L3R5 266 aa16.77■□□□□ 0.28
GATAD1-203ENST00000493878 PBRM1Q86U86 1689 aa16.76■□□□□ 0.27
GATAD1-203ENST00000493878 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
GATAD1-203ENST00000493878 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
GATAD1-203ENST00000493878 TONSLQ96HA7 1378 aa16.75■□□□□ 0.27
GATAD1-203ENST00000493878 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
GATAD1-203ENST00000493878 KDM5BQ9UGL1 1544 aa16.73■□□□□ 0.27
GATAD1-203ENST00000493878 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
GATAD1-203ENST00000493878 WDR62O43379 1518 aa16.72■□□□□ 0.27
GATAD1-203ENST00000493878 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
GATAD1-203ENST00000493878 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
GATAD1-203ENST00000493878 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
GATAD1-203ENST00000493878 KIAA0586Q9BVV6 1533 aa16.67■□□□□ 0.26
GATAD1-203ENST00000493878 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
GATAD1-203ENST00000493878 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
GATAD1-203ENST00000493878 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
GATAD1-203ENST00000493878 ANP32CO43423 234 aa16.63■□□□□ 0.25
GATAD1-203ENST00000493878 TSHZ2Q9NRE2 1034 aa16.63■□□□□ 0.25
GATAD1-203ENST00000493878 DISP1Q96F81 1524 aa16.61■□□□□ 0.25
GATAD1-203ENST00000493878 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
GATAD1-203ENST00000493878 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
GATAD1-203ENST00000493878 DAPK1P53355 1430 aa16.56■□□□□ 0.24
GATAD1-203ENST00000493878 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
GATAD1-203ENST00000493878 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
GATAD1-203ENST00000493878 RRP7BPQ9NSQ0 103 aa16.56■□□□□ 0.24
GATAD1-203ENST00000493878 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
GATAD1-203ENST00000493878 GRIN2AQ12879 1464 aa16.55■□□□□ 0.24
GATAD1-203ENST00000493878 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
GATAD1-203ENST00000493878 KDM6BO15054 1643 aa16.54■□□□□ 0.24
GATAD1-203ENST00000493878 ABCC5O15440 1437 aa16.54■□□□□ 0.24
GATAD1-203ENST00000493878 RAPGEF6Q8TEU7 1601 aa16.53■□□□□ 0.24
GATAD1-203ENST00000493878 ANKRD30BQ9BXX2 1392 aa16.53■□□□□ 0.24
GATAD1-203ENST00000493878 CDK11AQ9UQ88 783 aaPredicted RBP16.52■□□□□ 0.24
GATAD1-203ENST00000493878 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.23
GATAD1-203ENST00000493878 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.23
GATAD1-203ENST00000493878 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms